Interactive Phylogenetics Module

Gene Id
Potri.001G087400

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.001G087400 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1499.6 731 100.0
Potri.003G143700 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1438.7 731 95.8
Solyc08g082830.2 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1315.8 732 86.1
GSVIVG01019608001 Vitis vinifera HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1296.6 732 85.5
AT1G55090 Arabidopsis thaliana HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1277.3 731 83.3
p5.00_sc00006_p0154 Elaeis guineensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1234.2 731 80.8
CALSI_Maker00005878 Calamus simplicifolius HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1221.8 734 79.0
evm.TU.AsparagusV1_07.3669.V1.1 Asparagus officinalis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1221.5 729 78.9
Aco003438 Ananas comosus HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1207.2 736 78.0
Sobic.002G112700 Sorghum bicolor HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1186.0 733 76.9
Misin04G109200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1184.5 733 76.8
Seita.2G110200 Setaria italica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1181.0 734 77.1
Zm00008a008470 Zea mays PH207 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1181.0 733 76.8
Misin03G098200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1180.2 733 76.7
Ma02_g07730 Musa acuminata HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1179.1 734 76.4
Spipo4G0085100 Spirodela polyrhiza HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1178.3 733 76.3
Sspon.02G0020200-1A Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1172.5 730 76.8
TraesCS3B02G090300 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1171.8 738 75.6
TraesCS3A02G076400 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1171.0 738 75.6
PEQU_08732 Phalaenopsis equestris HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1169.1 734 76.0
OsR498G0713585300.01 Oryza sativa ssp. indica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1168.7 734 76.0
HORVU3Hr1G013640 Hordeum vulgare HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1167.9 738 75.5
OB07G13280 Oryza brachyantha HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1167.9 734 76.3
LOC_Os07g07260 Oryza sativa ssp. japonica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1167.5 734 75.9
TraesCS3D02G076500 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1167.5 738 75.6
Bradi1g29020 Brachypodium distachyon HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1166.8 740 75.3
Zosma8g00780 Zostera marina HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1161.7 698 80.1
LP027001 Lolium perenne HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1158.7 738 74.8
ATR1098G082 Amborella trichopoda HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1137.9 697 78.2
Zm00001d005157 Zea mays B73 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1101.3 733 73.1
Sspon.02G0020200-3C Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1093.6 720 73.9
ASH_gene8283 Apostasia shenzhenica HOM04x5M005046 ORTHO04x5M006164 5.1e-311 1069.3 659 76.9
TRITD3Av1G021090 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 1.1e-310 1068.1 737 70.4
TRITD3Bv1G024720 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 2.0e-310 1067.4 737 70.3
gene29750 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 2.5e-289 997.3 732 65.7
gene17841 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 5.5e-289 996.1 732 65.4
Mapoly0035s0052 Marchantia polymorpha HOM04x5M005046 ORTHO04x5M006164 3.7e-285 983.4 734 65.1
MCO17G006 Micromonas commoda HOM04x5M005046 ORTHO04x5M006164 2.9e-261 904.0 690 62.6
Pp3c17_21910 Physcomitrium patens HOM04x5M005046 ORTHO04x5M006164 1.0e-258 895.6 672 64.4
gene12860 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 3.4e-254 880.6 701 61.2
gene4078 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 4.9e-253 876.7 701 60.9
Cre10.g435250 Chlamydomonas reinhardtii HOM04x5M005046 ORTHO04x5M006164 1.6e-232 808.5 783 53.4
PAB00015820 Picea abies HOM04x5M005046 ORTHO04x5M006164 5.5e-172 607.4 413 71.7
Sspon.02G0020200-4D Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 1.2e-166 589.7 377 74.0
PH01002232G0310 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 7.7e-166 587.0 359 78.8
PH01002232G0290 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.2e-158 563.1 407 67.1
Oropetium_20150105_11454 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 1.8e-146 522.7 318 80.2
Oropetium_20150105_11453 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 9.9e-137 490.3 321 71.3
Zm00007a00049707 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 1.8e-130 469.5 332 71.4
PH01000031G0760 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 5.1e-117 424.9 242 83.5
Zm00007a00051183 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 2.7e-110 402.5 264 72.3
Sspon.02G0020200-2B Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 1.7e-96 356.7 195 87.7
Zjn_sc00077.1.g00130.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 8.0e-46 188.3 241 43.2
PH01000031G0750 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 3.3e-39 166.4 120 67.5
Pgl_GLEAN_10033649 Cenchrus americanus HOM04x5M005046 ORTHO04x5M006164 3.9e-24 116.3 66 75.8
evm.TU.AsparagusV1_05.1844.V1.1 Asparagus officinalis HOM04x5M001700 ORTHO04x5M004467 4.3e-23 112.8 66 77.3
Solyc06g071240.1 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 1.1e-21 108.2 130 52.3
PAB00013173 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.2e-20 104.8 64 75.0
Zjn_sc00077.1.g00140.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 1.2e-14 84.7 76 57.9

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings