Monocots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Pgl_GLEAN_10009993	Cenchrus americanus	HOM04x5M002570	ORTHO04x5M002687	6.9e-149	530.0	449	100.0
Seita.2G254700	Setaria italica	HOM04x5M002570	ORTHO04x5M002687	2.3e-75	285.8	631	57.1
Sobic.002G248600	Sorghum bicolor	HOM04x5M002570	ORTHO04x5M002687	2.1e-57	226.1	638	46.2
Zm00008a028437	Zea mays PH207	HOM04x5M002570	ORTHO04x5M002687	3.4e-55	218.8	613	38.8
Zm00001d020947	Zea mays B73	HOM04x5M002570	ORTHO04x5M002687	1.7e-54	216.5	612	39.2
Zm00007a00035265	Zea mays B104	HOM04x5M002570	ORTHO04x5M002687	1.7e-54	216.5	612	39.2
Zjn_sc00008.1.g09320.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M002412	ORTHO04x5M002551	5.4e-53	211.5	466	44.8
Misin04G229900	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	2.1e-52	209.5	630	44.6
Sspon.02G0037080-3D	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	2.3e-51	206.1	536	42.4
MisinT266000	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	1.2e-47	193.7	631	44.2
Sspon.02G0037080-2C	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	8.7e-43	177.6	176	63.1
Sspon.02G0037080-1B	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	1.6e-41	173.3	178	62.4
Bradi4g33820	Brachypodium distachyon	HOM04x5M002570	ORTHO04x5M002687	1.3e-38	163.7	213	48.8
TraesCS7B02G144300	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	2.4e-32	142.9	176	52.8
OsR498G0917730800.01	Oryza sativa ssp. indica	HOM04x5M002570	ORTHO04x5M002687	4.0e-32	142.1	532	34.0
HORVU7Hr1G050770	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	5.3e-32	141.7	195	48.2
OB09G21390	Oryza brachyantha	HOM04x5M002570	ORTHO04x5M002687	9.0e-32	141.0	160	54.4
TraesCS7A02G247200	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	1.5e-31	140.2	195	47.7
HORVU5Hr1G073540	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	5.8e-31	138.3	259	41.3
HORVU5Hr1G073580	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	5.8e-31	138.3	259	41.3
TraesCS7D02G245800	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	7.6e-31	137.9	176	51.1
PH01001573G0060	Phyllostachys edulis	HOM04x5M002570	ORTHO04x5M002687	1.3e-30	137.1	521	39.3
TraesCS5D02G274400	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	2.2e-30	136.3	260	43.8
TraesCS5B02G266200	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	2.5e-29	132.9	259	39.8
TRITD5Bv1G149570	Triticum turgidum	HOM04x5M002570	ORTHO04x5M002687	2.5e-29	132.9	259	39.8
TraesCS5A02G266600	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	4.2e-29	132.1	262	39.7
LOC_Os09g31454	Oryza sativa ssp. japonica	HOM04x5M002570	ORTHO04x5M002687	3.5e-28	129.0	176	48.3
TRITD5Av1G160060	Triticum turgidum	HOM04x5M002570	ORTHO04x5M002687	3.5e-28	129.0	247	45.3
PH01000770G0030	Phyllostachys edulis	HOM04x5M002570	ORTHO04x5M002687	2.5e-26	122.9	380	47.4
Misin13G182000	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	7.4e-26	121.3	155	50.3
Oropetium_20150105_05500	Oropetium thomaeum	HOM04x5M002570	ORTHO04x5M002687	9.6e-26	120.9	266	38.3
Sobic.007G209500	Sorghum bicolor	HOM04x5M002570	ORTHO04x5M002687	6.3e-25	118.2	209	41.6
Zm00001d031454	Zea mays B73	HOM04x5M002570	ORTHO04x5M002687	9.0e-24	114.4	165	48.5
Zm00007a00022852	Zea mays B104	HOM04x5M002570	ORTHO04x5M002687	9.0e-24	114.4	165	48.5
Sspon.06G0001740-1A	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	3.4e-23	112.5	155	48.4
Sspon.06G0001740-2D	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	3.4e-23	112.5	155	48.4
Seita.6G206100	Setaria italica	HOM04x5M002570	ORTHO04x5M002687	5.9e-23	111.7	180	48.3
LP013034	Lolium perenne	HOM04x5M002570	ORTHO04x5M002687	1.1e-21	107.5	143	49.0
OsR498G0816445800.01	Oryza sativa ssp. indica	HOM04x5M002570	ORTHO04x5M002687	1.9e-21	106.7	135	49.6
Ma09_g12020	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	3.6e-20	102.4	175	44.0
Bradi3g40060	Brachypodium distachyon	HOM04x5M002570	ORTHO04x5M002687	1.3e-19	100.5	148	45.3
Ma08_g26310	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	1.8e-19	100.1	133	47.4
Misin07G233600	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	2.3e-19	99.8	210	41.4
LP030104	Lolium perenne	HOM04x5M002570	ORTHO04x5M002687	3.0e-19	99.4	156	42.3
Ma09_g18710	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	3.9e-19	99.0	247	35.2
LOC_Os08g39980	Oryza sativa ssp. japonica	HOM04x5M002570	ORTHO04x5M002687	3.9e-19	99.0	127	48.8
Ma09_g28270	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	1.9e-18	96.7	207	38.2
CALSI_Maker00014448	Calamus simplicifolius	HOM04x5M002570	ORTHO04x5M002687	4.3e-18	95.5	137	46.0
p5.00_sc00131_p0015	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	4.8e-17	92.0	143	43.4
Pgl_GLEAN_10002113	Cenchrus americanus	HOM04x5M002570	ORTHO04x5M002687	1.4e-16	90.5	310	43.5
p5.00_sc00096_p0028	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	1.8e-16	90.1	134	44.0
CALSI_Maker00032927	Calamus simplicifolius	HOM04x5M002570	ORTHO04x5M002687	3.1e-16	89.4	117	47.9
AT2G42150	Arabidopsis thaliana	HOM04x5M002570	ORTHO04x5M002687	6.9e-16	88.2	175	39.4
Spipo0G0079200	Spirodela polyrhiza	HOM04x5M002570	ORTHO04x5M002687	9.1e-16	87.8	151	42.4
ASH_gene16039	Apostasia shenzhenica	HOM04x5M002570	ORTHO04x5M002687	2.6e-15	86.3	135	40.7
Aco000751	Ananas comosus	HOM04x5M002570	ORTHO04x5M002687	2.9e-14	82.8	150	43.3
Potri.003G212500	Populus trichocarpa	HOM04x5M002570	ORTHO04x5M002687	1.4e-13	80.5	116	45.7
p5.00_sc00020_p0160	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	3.2e-13	79.3	194	35.1
OB08G26960	Oryza brachyantha	HOM04x5M002570	ORTHO04x5M002687	3.2e-13	79.3	58	69.0
AT3G57980	Arabidopsis thaliana	HOM04x5M002570	ORTHO04x5M002687	5.5e-13	78.6	153	38.6
p5.00_sc00037_p0129	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	1.6e-12	77.0	117	43.6
Spipo12G0037900	Spirodela polyrhiza	HOM04x5M002570	ORTHO04x5M002687	3.6e-12	75.9	150	37.3
AT2G44430	Arabidopsis thaliana	HOM04x5M002570	ORTHO04x5M002687	6.1e-12	75.1	133	41.4
GSVIVG01001371001	Vitis vinifera	HOM04x5M002570	ORTHO04x5M002687	3.0e-11	72.8	139	36.7
Solyc01g073950.2	Solanum lycopersicum	HOM04x5M002570	ORTHO04x5M002687	3.9e-11	72.4	153	35.9
AT3G60110	Arabidopsis thaliana	HOM04x5M002570	ORTHO04x5M002687	6.7e-11	71.6	130	38.5
p5.00_sc00154_p0058	Elaeis guineensis	HOM04x5M006888	ORTHO04x5M008419	6.7e-11	71.6	104	40.4
ATR0693G270	Amborella trichopoda	HOM04x5M002570	ORTHO04x5M002687	1.5e-10	70.5	131	38.2
Potri.001G013600	Populus trichocarpa	HOM04x5M002570	ORTHO04x5M002687	1.5e-10	70.5	112	42.9
CALSI_Maker00019150	Calamus simplicifolius	HOM04x5M006888	ORTHO04x5M008419	2.2e-09	66.6	95	42.1
CALSI_Maker00038910	Calamus simplicifolius	HOM04x5M002570	ORTHO04x5M002687	3.7e-09	65.9	151	34.4
Solyc02g078810.2	Solanum lycopersicum	HOM04x5M006888	ORTHO04x5M008419	4.8e-09	65.5	127	36.2
Zm00007a00040219	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	6.3e-09	65.1	112	38.4
PAB00018157	Picea abies	HOM04x5M002570	ORTHO04x5M002687	8.2e-09	64.7	147	32.0
Zosma54g00430	Zostera marina	HOM04x5M002570	ORTHO04x5M002687	1.1e-08	64.3	121	38.8
Solyc10g009160.2	Solanum lycopersicum	HOM04x5M006888	ORTHO04x5M008419	1.4e-08	63.9	99	34.3
LP000741	Lolium perenne	HOM04x5M006888	ORTHO04x5M008419	1.8e-08	63.5	137	38.0
Potri.001G229300	Populus trichocarpa	HOM04x5M002570	ORTHO04x5M002687	1.8e-08	63.5	160	35.0
ATR0605G388	Amborella trichopoda	HOM04x5M002570	ORTHO04x5M002687	4.1e-08	62.4	130	35.4
Bradi1g24580	Brachypodium distachyon	HOM04x5M006888	ORTHO04x5M008419	4.1e-08	62.4	171	29.2
Pp3c17_1160	Physcomitrium patens	HOM04x5M002570	ORTHO04x5M002687	4.1e-08	62.4	143	30.8
Pp3c17_1175	Physcomitrium patens	HOM04x5M002570	ORTHO04x5M002687	4.1e-08	62.4	143	30.8
Zm00008a003238	Zea mays PH207	HOM04x5M002570	ORTHO04x5M002687	6.9e-08	61.6	116	39.7
PEQU_14986	Phalaenopsis equestris	HOM04x5M002570	ORTHO04x5M002687	9.1e-08	61.2	49	61.2
OB07G24680	Oryza brachyantha	HOM04x5M006888	ORTHO04x5M008419	1.2e-07	60.8	102	36.3
PH01003906G0090	Phyllostachys edulis	HOM04x5M006888	ORTHO04x5M008419	1.5e-07	60.5	112	35.7
Zjn_sc00015.1.g05520.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M002412	ORTHO04x5M002551	2.0e-07	60.1	234	29.5
Zosma16g01780	Zostera marina	HOM04x5M002570	ORTHO04x5M002687	1.7e-06	57.0	167	31.7
CALSI_Maker00044427	Calamus simplicifolius	HOM04x5M006888	ORTHO04x5M008419	2.2e-06	56.6	98	37.8
TraesCS2A02G202700	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	2.2e-06	56.6	94	37.2
TRITD2Av1G074100	Triticum turgidum	HOM04x5M006888	ORTHO04x5M008419	2.2e-06	56.6	94	37.2
Potri.004G036900	Populus trichocarpa	HOM04x5M006888	ORTHO04x5M008419	2.9e-06	56.2	141	34.8
TraesCS2B02G229800	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	2.9e-06	56.2	94	37.2
TraesCS2D02G213000	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	2.9e-06	56.2	94	37.2
TRITD2Bv1G083420	Triticum turgidum	HOM04x5M006888	ORTHO04x5M008419	2.9e-06	56.2	94	37.2
Aco009146	Ananas comosus	HOM04x5M006888	ORTHO04x5M008419	5.0e-06	55.5	137	29.9
Misin03G324100	Miscanthus sinensis	HOM04x5M006888	ORTHO04x5M008419	6.5e-06	55.1	100	37.0
MisinT311500	Miscanthus sinensis	HOM04x5M006888	ORTHO04x5M008419	6.5e-06	55.1	100	37.0
Sobic.002G341100	Sorghum bicolor	HOM04x5M006888	ORTHO04x5M008419	6.5e-06	55.1	100	37.0
Zm00001d006606	Zea mays B73	HOM04x5M006888	ORTHO04x5M000946	8.5e-06	54.7	100	36.0
Zm00007a00010553	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	8.5e-06	54.7	100	36.0

External Sequences (optional)

External Sequences Type

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