Interactive Phylogenetics Module

Gene Id
Pgl_GLEAN_10004734

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.0e-220 768.5 393 100.0
Seita.8G134100 Setaria italica HOM04x5M001523 ORTHO04x5M001589 3.6e-202 706.8 411 90.3
Sobic.005G129400 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 7.3e-195 682.6 411 86.9
Misin09G134700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.5e-192 674.9 411 85.9
Misin10G109400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 2.6e-192 674.1 411 85.9
Zm00001d049273 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 2.7e-189 664.1 411 84.4
Sspon.06G0014630-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.2e-183 644.4 462 76.2
Zm00007a00011305 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 3.3e-179 630.6 411 81.5
Oropetium_20150105_21536 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 5.8e-176 619.8 430 78.1
TRITD4Av1G154160 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 4.6e-173 610.1 424 76.4
OB11G21770 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 7.8e-173 609.4 407 78.1
TraesCS4A02G192600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.8e-173 609.4 421 76.7
HORVU4Hr1G023390 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 2.3e-172 607.8 424 75.9
LOC_Os11g31950 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 2.3e-172 607.8 409 77.3
TRITD4Bv1G050480 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 5.1e-172 606.7 424 75.9
TraesCS4B02G122700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 8.7e-172 605.9 421 76.2
Bradi4g17917 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 2.5e-171 604.4 413 76.8
TraesCS4D02G120700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.3e-171 602.8 421 76.0
Sspon.06G0014630-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-169 599.0 410 77.6
LP038183 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 1.5e-168 595.1 407 76.9
Sspon.06G0014630-3C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 9.3e-166 585.9 405 77.0
Sspon.06G0014630-4D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 6.2e-162 573.2 411 75.7
OsR498G1120235900.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 1.7e-127 458.8 324 75.6
Aco027227 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.4e-92 342.8 411 49.4
Solyc03g118390.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 8.3e-90 333.6 404 48.3
Zosma69g00810 Zostera marina HOM04x5M001523 ORTHO04x5M001589 3.3e-86 321.6 353 50.4
LOC_Os01g70320 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 3.9e-79 298.1 236 63.1
OB01G51640 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 5.0e-79 297.7 236 63.1
p5.00_sc01766_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 1.1e-78 296.6 224 65.6
p5.00_sc00057_p0063 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 1.1e-78 296.6 236 63.1
ATR0582G200 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 1.9e-78 295.8 227 67.4
Zjn_sc00186.1.g00130.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.9e-78 295.8 382 49.2
LP009590 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 2.5e-78 295.4 224 62.9
Aco015077 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 4.3e-78 294.7 224 65.2
Ma09_g01020 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 9.5e-78 293.5 395 43.8
Misin05G403900 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 2.1e-77 292.4 224 62.9
Sobic.003G412300 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 1.4e-76 289.7 224 62.5
Bradi2g59510 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 4.0e-76 288.1 225 62.2
HORVU3Hr1G096450 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 8.9e-76 287.0 226 61.9
Misin06G371400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 8.9e-76 287.0 224 61.6
Seita.5G438400 Setaria italica HOM04x5M001523 ORTHO04x5M001589 8.9e-76 287.0 224 62.9
TraesCS3B02G476100 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 8.9e-76 287.0 227 61.7
TraesCS3D02G435000 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 8.9e-76 287.0 226 61.9
Potri.003G164100 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.2e-75 286.6 387 42.9
TraesCS3A02G442300 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.2e-75 286.6 231 61.0
TRITD3Av1G250250 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.2e-75 286.6 231 61.0
GSVIVG01008631001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 2.0e-75 285.8 289 57.1
ASH_gene19761 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 3.4e-75 285.0 238 61.8
TRITD3Bv1G242080 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 3.4e-75 285.0 231 60.6
Potri.012G105400 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.3e-74 283.1 270 56.3
Potri.001G065800 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.2e-74 282.3 274 54.0
GSVIVG01004935001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 2.2e-74 282.3 352 46.0
PEQU_07858 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 4.9e-74 281.2 234 62.8
Sspon.03G0027700-2C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 6.4e-74 280.8 224 61.6
Aco006674 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.1e-73 280.0 259 56.4
Zosma27g00300 Zostera marina HOM04x5M001523 ORTHO04x5M001589 5.4e-73 277.7 224 61.2
Spipo4G0061800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 7.1e-73 277.3 220 62.7
Potri.015G104600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.2e-72 276.6 263 55.5
Sspon.03G0027700-1P Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 3.5e-72 275.0 216 62.5
Oropetium_20150105_09846 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 6.6e-71 270.8 225 60.4
CALSI_Maker00018832 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 1.1e-70 270.0 464 39.2
PEQU_08641 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 1.1e-70 270.0 225 60.9
Ma04_g00060 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 2.5e-70 268.9 226 62.4
CALSI_Maker00037144 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 8.9e-68 260.4 312 47.4
AT4G25070 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 4.4e-67 258.1 225 56.0
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 9.9e-67 256.9 344 45.1
gene4642 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 2.2e-66 255.8 226 58.0
AT3G48860 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.9e-66 255.4 276 50.7
gene16812 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 4.9e-66 254.6 226 57.5
Ma02_g03510 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 6.4e-66 254.2 232 53.9
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 6.4e-66 254.2 357 40.6
Aco007293 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 8.3e-66 253.8 220 57.7
ATR0706G100 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 8.3e-66 253.8 254 53.9
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 7.1e-65 250.8 406 39.2
AT5G13260 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.7e-64 248.8 221 58.4
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 1.3e-63 246.5 355 40.6
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 1.7e-63 246.1 393 38.9
Potri.005G044600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.3e-63 245.7 234 53.4
Pp3c19_9680 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.5e-62 242.3 226 55.8
AT4G08630 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 7.3e-62 240.7 273 48.0
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 7.3e-62 240.7 318 43.1
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 9.6e-62 240.4 338 40.8
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 1.6e-61 239.6 356 41.3
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.6e-61 239.6 355 40.6
AT5G23700 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.8e-61 238.8 238 53.8
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 2.8e-61 238.8 377 41.1
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 2.8e-61 238.8 377 41.1
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 3.6e-61 238.4 351 41.0
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.1e-60 236.9 377 40.8
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 3.1e-60 235.3 360 40.3
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 4.0e-60 235.0 362 40.1
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 8.9e-60 233.8 379 41.4
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 8.9e-60 233.8 379 41.4
Pp3c22_21290 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.0e-59 232.6 226 54.0
Pp3c22_21255 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.0e-59 232.6 226 54.0
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 3.4e-59 231.9 331 41.7
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.3e-58 229.9 360 40.0
Mapoly0101s0059 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 1.2e-56 223.4 226 52.2
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.5e-54 216.5 325 40.0
Spipo7G0049800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 2.5e-54 215.7 225 52.4
Zjn_sc00009.1.g01850.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.8e-52 209.5 224 50.9
CALSI_Maker00016663 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 3.1e-52 208.8 258 45.7
Pgl_GLEAN_10000952 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 9.0e-52 207.2 179 56.4
Zm00007a00002495 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 4.9e-50 201.4 166 59.0
Zm00008a012853 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 4.9e-50 201.4 166 59.0
PH01000002G3240 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 8.4e-50 200.7 399 36.6
CALSI_Maker00048189 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 4.6e-48 194.9 211 47.9
GSVIVG01021962001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 3.9e-47 191.8 194 53.1
Mapoly0013s0021 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 2.6e-43 179.1 225 44.9
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 1.3e-42 176.8 372 32.3
Zosma5g01040 Zostera marina HOM04x5M001523 ORTHO04x5M001589 5.4e-41 171.4 218 41.7
evm.TU.AsparagusV1_09.1475.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 6.9e-36 154.5 115 66.1
PAB00042674 Picea abies HOM04x5M001523 ORTHO04x5M001589 2.2e-34 149.4 129 58.1
Pgl_GLEAN_10000785 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.6e-32 143.3 150 51.3
Zjn_sc00034.1.g02320.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 7.9e-32 141.0 120 60.0
Zm00001d042262 Zea mays B73 HOM04x5M000360 ORTHO04x5M000256 2.3e-31 139.4 336 33.3
p5.00_sc00211_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 4.8e-29 131.7 221 37.6
evm.TU.AsparagusV1_04.1549.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.2e-27 127.1 120 56.7
Solyc10g037930.1 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 1.5e-27 126.7 143 47.6
Zm00008a015371 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 5.0e-26 121.7 196 46.9
PH01083440G0010 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 3.0e-23 112.5 65 84.6
PEQU_04259 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 9.7e-22 107.5 159 39.0
OsR498G0509736400.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 8.2e-21 104.4 110 49.1
evm.TU.AsparagusV1_Unassigned.393.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.2e-19 100.5 69 66.7
ASH_gene8570 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 2.0e-19 99.8 96 50.0
PH01002160G0250 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 7.7e-19 97.8 58 74.1
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 6.5e-18 94.7 244 34.8
Solyc05g023770.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 1.4e-17 93.6 221 31.7
Aco021763 Ananas comosus HOM04x5M001523 ORTHO04x5M009652 5.5e-17 91.7 72 63.9
PAB00048619 Picea abies HOM04x5M001523 ORTHO04x5M001589 1.8e-15 86.7 107 50.5
MCO12G428 Micromonas commoda HOM04x5M001523 ORTHO04x5M001589 1.3e-13 80.5 318 27.4
Aco028088 Ananas comosus HOM04x5M000382 ORTHO04x5M000270 2.0e-11 73.2 69 53.6
Cre03.g161578 Chlamydomonas reinhardtii HOM04x5M001523 ORTHO04x5M001589 2.0e-11 73.2 245 25.7
Zm00001d024833 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 3.4e-11 72.4 121 34.7
PH01002160G0270 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 6.5e-10 68.2 143 35.0
PAB00006093 Picea abies HOM04x5M001523 ORTHO04x5M001589 1.1e-09 67.4 54 63.0
Sspon.07G0013220-3D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 6.7e-07 58.2 114 30.7
GSVIVG01021966001 Vitis vinifera HOM04x5M001523 ORTHO04x5M016727 3.3e-06 55.8 51 54.9

Amborella trichopoda (2 genes)
Ananas comosus (6 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (4 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (4 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (3 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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