Interactive Phylogenetics Module

Gene Id
Pgl_GLEAN_10003488

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pgl_GLEAN_10003488 Cenchrus americanus HOM04x5M005648 ORTHO04x5M006949 1.2e-258 895.2 635 100.0
Seita.3G040000 Setaria italica HOM04x5M005648 ORTHO04x5M006949 5.3e-203 710.3 800 68.5
Sspon.07G0013300-2B Saccharum spontaneum HOM04x5M005648 ORTHO04x5M006949 2.0e-186 655.2 787 60.9
Sobic.009G042100 Sorghum bicolor HOM04x5M005648 ORTHO04x5M006949 2.8e-180 634.8 803 62.1
Misin17G050400 Miscanthus sinensis HOM04x5M005648 ORTHO04x5M006949 4.1e-179 630.9 801 63.9
Misin16G053500 Miscanthus sinensis HOM04x5M005648 ORTHO04x5M006949 3.2e-176 621.3 801 61.2
Sspon.07G0013300-1A Saccharum spontaneum HOM04x5M005648 ORTHO04x5M006949 6.5e-169 597.0 744 62.5
Zjn_sc00025.1.g00280.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005648 ORTHO04x5M006949 2.0e-165 585.5 837 57.0
OB05G13080 Oryza brachyantha HOM04x5M005648 ORTHO04x5M006949 2.2e-161 572.0 805 53.0
Oropetium_20150105_15522 Oropetium thomaeum HOM04x5M005648 ORTHO04x5M006949 1.0e-153 546.6 724 59.7
PH01001556G0330 Phyllostachys edulis HOM04x5M005648 ORTHO04x5M006949 1.0e-150 536.6 709 54.0
TraesCS1A02G109500 Triticum aestivum HOM04x5M005648 ORTHO04x5M006949 9.8e-149 530.0 801 52.4
TraesCS1D02G091200 Triticum aestivum HOM04x5M005648 ORTHO04x5M006949 2.4e-147 525.4 801 52.9
TRITD1Av1G046480 Triticum turgidum HOM04x5M005648 ORTHO04x5M006949 5.4e-147 524.2 732 55.3
Zm00001d024828 Zea mays B73 HOM04x5M005648 ORTHO04x5M006949 1.2e-146 523.1 805 55.5
Zm00007a00006559 Zea mays B104 HOM04x5M005648 ORTHO04x5M006949 1.2e-146 523.1 805 55.5
HORVU1Hr1G019650 Hordeum vulgare HOM04x5M005648 ORTHO04x5M006949 2.9e-145 518.5 801 51.8
Zm00008a037488 Zea mays PH207 HOM04x5M005648 ORTHO04x5M006949 7.2e-144 513.8 802 55.1
TraesCS1B02G109000 Triticum aestivum HOM04x5M005648 ORTHO04x5M006949 2.3e-142 508.8 754 57.4
TRITD1Bv1G043450 Triticum turgidum HOM04x5M005648 ORTHO04x5M006949 2.3e-142 508.8 754 57.4
Bradi3g49040 Brachypodium distachyon HOM04x5M005648 ORTHO04x5M006949 5.7e-133 477.6 517 53.8
LP011593 Lolium perenne HOM04x5M005648 ORTHO04x5M006949 1.8e-131 472.6 516 53.3
OsR498G0509732900.01 Oryza sativa ssp. indica HOM04x5M005648 ORTHO04x5M006949 2.0e-130 469.2 437 62.2
LOC_Os05g05450 Oryza sativa ssp. japonica HOM04x5M005648 ORTHO04x5M006949 3.3e-128 461.8 432 62.0
Aco008026 Ananas comosus HOM04x5M005648 ORTHO04x5M006949 2.5e-120 435.6 726 44.1
p5.00_sc00002_p0274 Elaeis guineensis HOM04x5M005648 ORTHO04x5M006949 3.3e-120 435.3 754 41.1
evm.TU.AsparagusV1_05.3166.V1.1 Asparagus officinalis HOM04x5M005648 ORTHO04x5M006949 4.9e-116 421.4 518 48.6
PEQU_20062 Phalaenopsis equestris HOM04x5M005648 ORTHO04x5M006949 3.7e-108 395.2 434 50.0
ATR0697G033 Amborella trichopoda HOM04x5M005648 ORTHO04x5M006949 2.5e-104 382.5 731 39.3
Solyc03g097280.2 Solanum lycopersicum HOM04x5M005648 ORTHO04x5M006949 4.4e-101 371.7 512 44.1
Ma07_g28810 Musa acuminata HOM04x5M005648 ORTHO04x5M006949 5.8e-101 371.3 797 44.3
Zosma107g00820 Zostera marina HOM04x5M005648 ORTHO04x5M006949 7.6e-101 370.9 439 48.1
GSVIVG01029949001 Vitis vinifera HOM04x5M005648 ORTHO04x5M006949 1.3e-100 370.2 431 48.7
Potri.013G061400 Populus trichocarpa HOM04x5M005648 ORTHO04x5M006949 3.0e-97 359.0 514 42.6
CALSI_Maker00048885 Calamus simplicifolius HOM04x5M005648 ORTHO04x5M006949 1.2e-93 347.1 782 37.1
AT5G17930 Arabidopsis thaliana HOM04x5M005648 ORTHO04x5M006949 5.8e-93 344.7 509 41.3
GSVIVG01027853001 Vitis vinifera HOM04x5M005648 ORTHO04x5M006949 1.1e-86 323.9 431 43.4
Mapoly0135s0015 Marchantia polymorpha HOM04x5M005648 ORTHO04x5M006949 2.1e-79 299.7 444 39.4
Pp3c3_21680 Physcomitrium patens HOM04x5M005648 ORTHO04x5M006949 1.3e-73 280.4 519 34.1
LP021074 Lolium perenne HOM04x5M005648 ORTHO04x5M006949 1.4e-67 260.4 503 53.1
ASH_gene12914 Apostasia shenzhenica HOM04x5M005648 ORTHO04x5M006949 3.5e-66 255.8 686 36.7
gene22609 Selaginella moellendorffii HOM04x5M005648 ORTHO04x5M006949 4.6e-66 255.4 428 37.1
gene18578 Selaginella moellendorffii HOM04x5M005648 ORTHO04x5M006949 6.1e-66 255.0 428 37.1
Bradi2g36200 Brachypodium distachyon HOM04x5M005648 ORTHO04x5M006949 5.9e-61 238.4 177 70.1
p5.00_sc00170_p0008 Elaeis guineensis HOM04x5M005648 ORTHO04x5M006949 2.6e-45 186.4 124 70.2
CALSI_Maker00013565 Calamus simplicifolius HOM04x5M005648 ORTHO04x5M006949 2.5e-43 179.9 212 51.4
Pp3c3_21687 Physcomitrium patens HOM04x5M005648 ORTHO04x5M006949 9.1e-38 161.4 249 39.8
Sspon.07G0013300-3D Saccharum spontaneum HOM04x5M005648 ORTHO04x5M006949 9.1e-38 161.4 152 84.2
Spipo2G0004700 Spirodela polyrhiza HOM04x5M005648 ORTHO04x5M006949 1.4e-30 137.5 150 52.0
Bradi2g36205 Brachypodium distachyon HOM04x5M005648 ORTHO04x5M006949 5.9e-29 132.1 95 71.6
Cre09.g415200 Chlamydomonas reinhardtii HOM04x5M005648 ORTHO04x5M006949 6.8e-17 92.0 492 23.0
MCO03G302 Micromonas commoda HOM04x5M005648 ORTHO04x5M006949 1.2e-13 81.3 449 20.5
p5.00_sc00170_p0009 Elaeis guineensis HOM04x5M005648 ORTHO04x5M006949 7.5e-08 62.0 73 54.8
PAB00028156 Picea abies HOM04x5M005648 ORTHO04x5M006949 2.2e-07 60.5 49 65.3
Zjn_sc00001.1.g00710.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004077 ORTHO04x5M004678 4.9e-07 59.3 80 50.0

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings