Interactive Phylogenetics Module

Gene Id
Pgl_GLEAN_10002113

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pgl_GLEAN_10002113 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 7.4e-176 619.8 436 100.0
Seita.6G206100 Setaria italica HOM04x5M002570 ORTHO04x5M002687 7.5e-128 460.3 476 67.0
HORVU7Hr1G050770 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 1.7e-79 299.7 497 51.7
Zjn_sc00015.1.g05520.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 3.9e-76 288.5 592 45.3
TraesCS7D02G245800 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 3.4e-72 275.4 490 49.6
TraesCS7A02G247200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 2.9e-71 272.3 491 49.1
Zm00001d031454 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 9.6e-67 257.3 504 49.8
Zm00007a00022852 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 9.6e-67 257.3 504 49.8
Sobic.007G209500 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 1.6e-66 256.5 590 44.9
Misin13G182000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 1.5e-64 250.0 585 44.6
OB08G26960 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 6.7e-60 234.6 387 56.8
Misin07G233600 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 1.7e-55 219.9 482 47.9
LP013034 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 2.2e-55 219.5 483 45.8
TraesCS7B02G144300 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 1.4e-54 216.9 490 44.9
Sspon.06G0001740-1A Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 6.1e-53 211.5 607 41.5
PH01000594G0730 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 1.3e-52 210.3 453 46.6
PH01000150G0150 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 1.8e-52 209.9 261 61.7
TRITD7Av1G092980 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 6.7e-52 208.0 450 46.2
Zm00008a003238 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 5.5e-46 188.3 451 47.5
Sspon.06G0001740-2D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 9.4e-46 187.6 588 41.2
LOC_Os08g39980 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 1.3e-42 177.2 486 42.4
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 3.7e-42 175.6 396 44.2
Bradi3g40060 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 4.8e-42 175.3 459 45.3
Zm00001d020947 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 1.4e-41 173.7 431 38.7
Zm00007a00035265 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 1.4e-41 173.7 431 38.7
Zm00008a028437 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 1.8e-41 173.3 432 38.7
Sobic.002G248600 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 4.1e-41 172.2 469 43.1
Seita.2G254700 Setaria italica HOM04x5M002570 ORTHO04x5M002687 5.9e-40 168.3 406 44.1
PH01000770G0030 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 7.2e-38 161.4 412 43.9
Bradi4g33820 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 8.8e-36 154.5 275 42.2
TraesCS5B02G266200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 8.8e-36 154.5 279 44.1
TRITD5Bv1G149570 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 8.8e-36 154.5 279 44.1
TRITD7Bv1G067710 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 1.1e-35 154.1 449 41.9
Misin04G229900 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 2.6e-35 152.9 437 41.4
TraesCS5D02G274400 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 2.6e-35 152.9 284 43.7
TraesCS5A02G266600 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 4.4e-35 152.1 276 44.2
TRITD5Av1G160060 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 1.8e-33 146.7 272 43.8
HORVU5Hr1G073540 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 7.0e-33 144.8 283 41.3
HORVU5Hr1G073580 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 7.0e-33 144.8 283 41.3
PH01001573G0060 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 9.1e-33 144.4 464 42.7
Sspon.02G0037080-3D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 3.5e-32 142.5 440 41.1
MisinT266000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 1.9e-30 136.7 437 39.8
Ma09_g18710 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 3.2e-30 136.0 508 31.9
Ma09_g28270 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 1.0e-28 131.0 329 35.3
OsR498G0917730800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 8.8e-28 127.9 444 37.6
CALSI_Maker00038910 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 5.7e-27 125.2 277 37.9
PEQU_14986 Phalaenopsis equestris HOM04x5M002570 ORTHO04x5M002687 7.5e-27 124.8 391 32.5
p5.00_sc00131_p0015 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 4.8e-26 122.1 521 34.5
Ma08_g26310 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 6.3e-26 121.7 326 32.5
Sspon.02G0037080-2C Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 2.4e-25 119.8 422 38.4
GSVIVG01001371001 Vitis vinifera HOM04x5M002570 ORTHO04x5M002687 1.2e-24 117.5 286 38.5
p5.00_sc00037_p0129 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 5.9e-24 115.2 387 32.0
p5.00_sc00020_p0160 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.0e-23 114.4 402 31.8
Sspon.02G0037080-1B Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 3.8e-23 112.5 299 33.4
ASH_gene16039 Apostasia shenzhenica HOM04x5M002570 ORTHO04x5M002687 2.5e-22 109.8 538 28.8
Oropetium_20150105_20233 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 5.5e-22 108.6 230 39.6
CALSI_Maker00014448 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 1.0e-20 104.4 414 28.0
Ma09_g12020 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 1.0e-20 104.4 509 34.8
LP030104 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 5.2e-20 102.1 277 35.7
OsR498G0816445800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 5.2e-20 102.1 238 36.1
AT2G44430 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 6.8e-20 101.7 331 32.6
Potri.001G229300 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 4.4e-19 99.0 458 29.7
Solyc01g073950.2 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 4.4e-19 99.0 371 28.0
p5.00_sc00096_p0028 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 9.8e-19 97.8 341 30.2
CALSI_Maker00032927 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 3.7e-18 95.9 344 31.1
AT2G42150 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 1.8e-17 93.6 346 30.9
ATR0693G270 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 1.6e-16 90.5 274 31.4
Potri.003G212500 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 1.3e-15 87.4 130 36.9
Pgl_GLEAN_10009993 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 1.7e-15 87.0 310 43.5
AT3G60110 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 3.8e-15 85.9 328 30.8
Potri.001G013600 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 5.0e-15 85.5 130 36.9
Zosma16g01780 Zostera marina HOM04x5M002570 ORTHO04x5M002687 8.5e-15 84.7 116 42.2
CALSI_Maker00014450 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 1.1e-14 84.3 122 48.4
gene2213 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 1.5e-14 84.0 109 40.4
gene5260 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 1.5e-14 84.0 119 37.8
OB09G21390 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 3.2e-14 82.8 54 75.9
evm.TU.AsparagusV1_05.3091.V1.1 Asparagus officinalis HOM04x5M010342 ORTHO04x5M002687 1.2e-13 80.9 250 32.8
PAB00018157 Picea abies HOM04x5M002570 ORTHO04x5M002687 1.2e-13 80.9 111 45.9
AT3G57980 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 2.1e-13 80.1 500 29.0
p5.00_sc00259_p0022 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 2.1e-13 80.1 89 48.3
p5.00_sc00259_p0021 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 2.1e-13 80.1 89 48.3
evm.TU.AsparagusV1_03.2223.V1.1 Asparagus officinalis HOM04x5M006888 ORTHO04x5M008419 1.4e-12 77.4 311 27.3
LOC_Os09g31454 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 4.0e-12 75.9 468 31.4
ATR0605G035 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 5.2e-12 75.5 132 40.2
p5.00_sc00154_p0058 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 8.8e-12 74.7 301 28.2
AT1G61215 Arabidopsis thaliana HOM04x5M006888 ORTHO04x5M008419 1.5e-11 73.9 91 41.8
Spipo0G0079200 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 1.5e-11 73.9 112 51.8
PAB00022580 Picea abies HOM04x5M002570 ORTHO04x5M002687 2.0e-11 73.6 111 38.7
PAB00062047 Picea abies HOM04x5M002570 ORTHO04x5M002687 2.0e-11 73.6 111 38.7
CALSI_Maker00044662 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 3.4e-11 72.8 116 43.1
Zm00007a00029926 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 4.4e-11 72.4 95 54.7
Spipo0G0079100 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 5.7e-11 72.0 235 36.6
Aco000751 Ananas comosus HOM04x5M002570 ORTHO04x5M002687 2.2e-10 70.1 115 51.3
Spipo14G0058400 Spirodela polyrhiza HOM04x5M006888 ORTHO04x5M008419 2.2e-10 70.1 199 34.2
Aco009146 Ananas comosus HOM04x5M006888 ORTHO04x5M008419 6.3e-10 68.6 294 29.6
CALSI_Maker00044427 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 6.3e-10 68.6 281 28.5
Solyc10g009160.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 6.3e-10 68.6 300 27.3
Pp3c17_1160 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 8.3e-10 68.2 74 50.0
Pp3c17_1175 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 8.3e-10 68.2 74 50.0
Spipo12G0037900 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 1.4e-09 67.4 111 46.8
Solyc02g078810.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 2.4e-09 66.6 354 25.4
Mapoly0032s0025 Marchantia polymorpha HOM04x5M002570 ORTHO04x5M002687 3.1e-09 66.2 107 35.5
Solyc01g006470.1 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 9.2e-09 64.7 85 37.6
Potri.004G036900 Populus trichocarpa HOM04x5M006888 ORTHO04x5M008419 1.6e-08 63.9 191 30.9
Oropetium_20150105_05500 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 4.5e-08 62.4 60 60.0
Pgl_GLEAN_10015811 Cenchrus americanus HOM04x5M000354 ORTHO04x5M002431 1.0e-07 61.2 111 35.1
Spipo12G0037800 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 1.3e-07 60.8 90 38.9
TraesCS2B02G229800 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 1.7e-07 60.5 99 36.4
TRITD2Bv1G083420 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 1.7e-07 60.5 99 36.4
HORVU2Hr1G039990 Hordeum vulgare HOM04x5M006888 ORTHO04x5M008419 2.3e-07 60.1 69 40.6
TraesCS2A02G202700 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 6.6e-07 58.5 69 39.1
TraesCS2D02G213000 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 6.6e-07 58.5 69 39.1
TRITD2Av1G074100 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 6.6e-07 58.5 69 39.1
ATR0605G388 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 1.1e-06 57.8 34 82.4
LOC_Os07g37800 Oryza sativa ssp. japonica HOM04x5M006888 ORTHO04x5M008419 1.1e-06 57.8 116 34.5
Seita.2G354700 Setaria italica HOM04x5M006888 ORTHO04x5M008419 1.1e-06 57.8 111 31.5
OB07G24680 Oryza brachyantha HOM04x5M006888 ORTHO04x5M008419 1.9e-06 57.0 81 37.0
Potri.009G023100 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 1.9e-06 57.0 138 34.8
Bradi1g24580 Brachypodium distachyon HOM04x5M006888 ORTHO04x5M008419 3.3e-06 56.2 284 25.0
PH01000363G0270 Phyllostachys edulis HOM04x5M006888 ORTHO04x5M002431 5.6e-06 55.5 102 34.3

Amborella trichopoda (3 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (7 genes)
Hordeum vulgare (4 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings