Interactive Phylogenetics Module

Gene Id
PH01003906G0090

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
PH01003906G0090 Phyllostachys edulis HOM04x5M006888 ORTHO04x5M008419 2.3e-243 844.0 482 100.0
PH01000363G0270 Phyllostachys edulis HOM04x5M006888 ORTHO04x5M002431 7.1e-176 619.8 416 89.4
OB07G24680 Oryza brachyantha HOM04x5M006888 ORTHO04x5M008419 4.0e-171 604.0 462 74.2
LP000741 Lolium perenne HOM04x5M006888 ORTHO04x5M008419 4.1e-131 471.1 612 50.2
Sobic.002G341100 Sorghum bicolor HOM04x5M006888 ORTHO04x5M008419 2.9e-129 464.9 548 53.5
LOC_Os07g37800 Oryza sativa ssp. japonica HOM04x5M006888 ORTHO04x5M008419 8.5e-129 463.4 464 58.8
Seita.2G354700 Setaria italica HOM04x5M006888 ORTHO04x5M008419 1.1e-128 463.0 569 51.8
TraesCS2D02G213000 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 3.0e-126 454.9 585 56.6
Zm00007a00040219 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 5.2e-126 454.1 554 52.0
MisinT311500 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 2.0e-125 452.2 541 52.5
Sspon.02G0005140-1A Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 7.5e-125 450.3 541 52.3
Sspon.02G0005140-2B Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 1.7e-124 449.1 541 52.3
Zm00001d006606 Zea mays B73 HOM04x5M006888 ORTHO04x5M000946 2.3e-118 428.7 552 50.0
TraesCS2B02G229800 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 9.8e-117 423.3 547 55.8
TRITD2Bv1G083420 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 9.8e-117 423.3 547 55.8
TraesCS2A02G202700 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 6.3e-116 420.6 520 57.7
TRITD2Av1G074100 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 6.3e-116 420.6 520 57.7
Bradi1g24580 Brachypodium distachyon HOM04x5M006888 ORTHO04x5M008419 8.3e-116 420.2 594 48.3
Zm00008a029109 Zea mays PH207 HOM04x5M006888 ORTHO04x5M008419 1.1e-115 419.9 519 51.3
Misin03G324100 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 3.1e-115 418.3 541 50.3
Zm00001d021810 Zea mays B73 HOM04x5M000354 ORTHO04x5M008419 1.7e-113 412.5 565 48.7
Pgl_GLEAN_10015811 Cenchrus americanus HOM04x5M000354 ORTHO04x5M002431 1.5e-109 399.4 538 54.3
Zjn_sc00001.1.g06600.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 1.8e-99 365.9 539 45.5
Zm00008a009570 Zea mays PH207 HOM04x5M006888 ORTHO04x5M008419 1.0e-89 333.6 486 46.5
p5.00_sc00154_p0058 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 3.6e-63 245.4 466 38.8
Oropetium_20150105_16539 Oropetium thomaeum HOM04x5M006888 ORTHO04x5M008419 3.6e-63 245.4 242 59.9
Zm00007a00010553 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 1.4e-62 243.4 241 58.1
HORVU2Hr1G039990 Hordeum vulgare HOM04x5M006888 ORTHO04x5M008419 9.0e-62 240.7 404 43.8
Aco009146 Ananas comosus HOM04x5M006888 ORTHO04x5M008419 3.8e-52 208.8 502 41.4
OsR498G0714588000.01 Oryza sativa ssp. indica HOM04x5M006888 ORTHO04x5M008419 1.9e-51 206.5 281 47.7
CALSI_Maker00044427 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 1.1e-48 197.2 474 35.7
Zm00008a026038 Zea mays PH207 HOM04x5M000606 ORTHO04x5M000852 4.9e-44 181.8 213 54.5
Zm00001d031299 Zea mays B73 HOM04x5M006888 ORTHO04x5M008419 5.7e-40 168.3 178 57.3
Zm00001d018373 Zea mays B73 HOM04x5M006888 ORTHO04x5M008419 5.7e-40 168.3 178 57.3
Zm00007a00051158 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 5.7e-40 168.3 178 57.3
Zm00007a00047365 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 5.7e-40 168.3 178 57.3
Potri.004G036900 Populus trichocarpa HOM04x5M006888 ORTHO04x5M008419 2.8e-39 166.0 513 30.0
Spipo14G0058400 Spirodela polyrhiza HOM04x5M006888 ORTHO04x5M008419 8.2e-39 164.5 470 32.1
ATR0693G270 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 2.4e-38 162.9 467 33.0
Solyc10g009160.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 2.9e-36 156.0 397 32.7
AT1G61215 Arabidopsis thaliana HOM04x5M006888 ORTHO04x5M008419 1.9e-35 153.3 480 32.3
CALSI_Maker00019150 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 4.6e-34 148.7 319 38.9
evm.TU.AsparagusV1_03.2223.V1.1 Asparagus officinalis HOM04x5M006888 ORTHO04x5M008419 1.3e-33 147.1 357 34.5
Solyc02g078810.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 5.0e-28 128.6 459 29.4
Zm00008a024306 Zea mays PH207 HOM04x5M000032 ORTHO04x5M008419 3.6e-26 122.5 92 68.5
p5.00_sc00259_p0022 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 4.4e-24 115.5 463 29.2
p5.00_sc00259_p0021 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 2.4e-22 109.8 271 34.3
Zjn_sc00008.1.g10910.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 1.0e-17 94.4 84 66.7
TraesCS7A02G247200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 2.2e-15 86.7 439 25.1
Zm00001d038498 Zea mays B73 HOM04x5M006888 ORTHO04x5M008419 8.2e-15 84.7 117 50.4
p5.00_sc00020_p0160 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.1e-14 84.3 415 24.6
Ma08_g26310 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 2.4e-14 83.2 406 24.9
PAB00018157 Picea abies HOM04x5M002570 ORTHO04x5M002687 5.3e-14 82.0 110 43.6
TraesCS7D02G245800 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 7.0e-14 81.6 436 23.9
HORVU7Hr1G050770 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 9.1e-14 81.3 436 23.9
Seita.6G206100 Setaria italica HOM04x5M002570 ORTHO04x5M002687 1.2e-13 80.9 425 25.9
Zm00001d020947 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 1.2e-13 80.9 500 23.8
Zm00007a00035265 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 1.2e-13 80.9 500 23.8
HORVU5Hr1G073540 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 2.0e-13 80.1 141 36.2
HORVU5Hr1G073580 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 2.0e-13 80.1 141 36.2
TraesCS7B02G144300 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 2.0e-13 80.1 381 23.9
Zm00008a028437 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 2.6e-13 79.7 500 23.6
ASH_gene16039 Apostasia shenzhenica HOM04x5M002570 ORTHO04x5M002687 5.9e-13 78.6 415 22.4
AT2G42150 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 7.7e-13 78.2 378 23.5
GSVIVG01001371001 Vitis vinifera HOM04x5M002570 ORTHO04x5M002687 1.0e-12 77.8 496 22.6
Ma09_g12020 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 1.7e-12 77.0 388 22.7
Bradi3g40060 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 3.8e-12 75.9 123 41.5
Solyc01g073950.2 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 3.8e-12 75.9 401 23.7
Sspon.02G0037080-1B Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 3.8e-12 75.9 121 38.8
p5.00_sc00096_p0028 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 6.5e-12 75.1 422 30.8
CALSI_Maker00014448 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 8.5e-12 74.7 115 38.3
Ma09_g28270 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 1.1e-11 74.3 386 22.0
Seita.2G254700 Setaria italica HOM04x5M002570 ORTHO04x5M002687 1.1e-11 74.3 134 35.1
Zm00001d031454 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 1.1e-11 74.3 131 38.2
Zm00007a00022852 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 1.1e-11 74.3 131 38.2
Sobic.002G248600 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 1.5e-11 73.9 126 36.5
TraesCS5D02G274400 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 1.5e-11 73.9 393 23.2
Bradi4g33820 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 1.9e-11 73.6 131 34.4
Sobic.007G209500 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 1.9e-11 73.6 135 37.0
Sspon.02G0037080-3D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 1.9e-11 73.6 128 35.9
Sspon.02G0037080-2C Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 1.9e-11 73.6 136 34.6
Misin13G182000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 2.5e-11 73.2 136 36.8
MisinT266000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 2.5e-11 73.2 127 36.2
AT3G60110 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 4.2e-11 72.4 416 23.8
Misin07G233600 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 465 26.2
LOC_Os09g31454 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 126 34.9
OsR498G0917730800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 126 34.9
Pp3c17_1160 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 141 37.6
Pp3c17_1175 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 141 37.6
TraesCS5A02G266600 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 395 22.8
TraesCS5B02G266200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 435 23.2
TRITD5Bv1G149570 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 5.5e-11 72.0 435 23.2
p5.00_sc00131_p0015 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 7.2e-11 71.6 120 36.7
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 7.2e-11 71.6 128 35.2
Misin04G229900 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 9.4e-11 71.2 132 33.3
p5.00_sc00037_p0129 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.2e-10 70.9 119 37.0
gene2213 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 1.6e-10 70.5 122 39.3
OB09G21390 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 4.7e-10 68.9 142 34.5
LP013034 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 6.1e-10 68.6 391 25.3
LOC_Os08g39980 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 6.1e-10 68.6 130 35.4
OsR498G0816445800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 6.1e-10 68.6 142 35.9
CALSI_Maker00032927 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 1.4e-09 67.4 119 34.5
gene5260 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 1.4e-09 67.4 122 38.5
Sspon.06G0001740-1A Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 2.3e-09 66.6 136 34.6
Sspon.06G0001740-2D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 2.3e-09 66.6 136 34.6
Aco000751 Ananas comosus HOM04x5M002570 ORTHO04x5M002687 3.0e-09 66.2 118 36.4
Ma09_g18710 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 6.7e-09 65.1 502 24.5
Zjn_sc00695.1.g00010.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 6.7e-09 65.1 46 73.9
ATR0605G388 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 1.5e-08 63.9 128 32.0
Solyc01g006470.1 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 5.7e-08 62.0 136 29.4
Spipo12G0037900 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 5.7e-08 62.0 119 36.1
PAB00022580 Picea abies HOM04x5M002570 ORTHO04x5M002687 7.5e-08 61.6 108 36.1
PAB00062047 Picea abies HOM04x5M002570 ORTHO04x5M002687 7.5e-08 61.6 108 36.1
Potri.001G229300 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 7.5e-08 61.6 518 22.0
Spipo0G0079200 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 7.5e-08 61.6 135 34.1
AT2G44430 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 9.7e-08 61.2 427 29.3
LP030104 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 9.7e-08 61.2 140 33.6
Oropetium_20150105_05500 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 3.7e-07 59.3 124 33.1
TRITD7Av1G092980 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 3.7e-07 59.3 158 31.0
Mapoly0032s0025 Marchantia polymorpha HOM04x5M002570 ORTHO04x5M002687 4.8e-07 58.9 124 31.5
evm.TU.AsparagusV1_05.3091.V1.1 Asparagus officinalis HOM04x5M010342 ORTHO04x5M002687 1.1e-06 57.8 185 29.2
Pgl_GLEAN_10009993 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 1.1e-06 57.8 112 35.7
TRITD5Av1G160060 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 3.1e-06 56.2 393 21.6
PH01000594G0730 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 4.1e-06 55.8 151 29.1
CALSI_Maker00044657 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 7.0e-06 55.1 60 45.0
ATR0605G035 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 9.1e-06 54.7 118 29.7

Amborella trichopoda (3 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (7 genes)
Hordeum vulgare (4 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (9 genes)
Triticum turgidum (5 genes)
Vitis vinifera (1 genes)
Zea mays B73 (7 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (5 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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