Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
PH01000674G0520	Phyllostachys edulis	HOM04x5M002748	ORTHO04x5M005073	2.3e-62	241.1	158	100.0
PH01003461G0070	Phyllostachys edulis	HOM04x5M002748	ORTHO04x5M003002	8.7e-22	106.3	86	70.9
PH01000514G0830	Phyllostachys edulis	HOM04x5M000164	ORTHO04x5M000320	1.9e-21	105.1	83	81.9
PH01000966G0330	Phyllostachys edulis	HOM04x5M003027	ORTHO04x5M005073	1.6e-20	102.1	83	71.1
PH01006982G0020	Phyllostachys edulis	HOM04x5M003027	ORTHO04x5M005073	8.1e-20	99.8	83	68.7
PH01000123G1100	Phyllostachys edulis	HOM04x5M004281	ORTHO04x5M005601	3.1e-19	97.8	88	67.0
PH01000253G0200	Phyllostachys edulis	HOM04x5M000791	ORTHO04x5M005073	2.6e-18	94.7	81	66.7
PH01000382G0160	Phyllostachys edulis	HOM04x5M003081	ORTHO04x5M003528	4.4e-18	94.0	83	66.3
PH01001591G0160	Phyllostachys edulis	HOM04x5M002345	ORTHO04x5M002512	7.1e-16	86.7	80	80.0
PH01000000G4350	Phyllostachys edulis	HOM04x5M004667	ORTHO04x5M005073	2.3e-14	81.6	125	45.6
PH01001692G0230	Phyllostachys edulis	HOM04x5M002295	ORTHO04x5M002718	6.6e-14	80.1	88	68.2
PH01001558G0110	Phyllostachys edulis	HOM04x5M002748	ORTHO04x5M005073	3.6e-12	74.3	83	69.9
PH01001167G0570	Phyllostachys edulis	HOM04x5M003965	ORTHO04x5M004669	9.0e-11	69.7	78	61.5
PH01000014G2470	Phyllostachys edulis	HOM04x5M000199	ORTHO04x5M003768	7.6e-10	66.6	83	51.8
PH01001115G0600	Phyllostachys edulis	HOM04x5M000002	ORTHO04x5M001986	3.8e-09	64.3	81	53.1
PH01000667G0040	Phyllostachys edulis	HOM04x5M001041	ORTHO04x5M003440	2.4e-08	61.6	78	53.8
PH01000914G0330	Phyllostachys edulis	HOM04x5M000683	ORTHO04x5M000561	4.2e-08	60.8	48	81.2
PH01000064G2190	Phyllostachys edulis	HOM04x5M003027	ORTHO04x5M162309	3.0e-06	54.7	74	51.4

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment