Interactive Phylogenetics Module

Gene Id
PH01000017G2160

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
PH01000017G2160 Phyllostachys edulis HOM04x5M002239 ORTHO04x5M002625 1.2e-213 745.0 405 100.0
LOC_Os03g02030 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 3.0e-175 617.5 374 82.1
OsR498G0305106600.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 3.9e-175 617.1 374 82.1
Bradi1g77850 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 9.9e-171 602.4 374 79.9
Sobic.001G535500 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 2.1e-168 594.7 374 80.7
Sspon.01G0000640-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.1e-168 594.7 374 80.7
Sspon.01G0000640-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 6.0e-168 593.2 374 80.5
Misin02G507900 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 1.9e-166 588.2 374 79.9
Misin01G518000 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 1.6e-165 585.1 374 79.4
OB03G10890 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 6.2e-165 583.2 374 80.7
Zm00008a036205 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 1.2e-163 578.9 374 78.6
HORVU4Hr1G089590 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 1.5e-163 578.6 375 78.4
TraesCSU02G034000 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 8.4e-162 572.8 375 77.9
TraesCS4B02G392600 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.9e-161 571.6 375 77.9
TRITD5Av1G257300 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.9e-161 571.6 375 77.6
Pgl_GLEAN_10037820 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 2.5e-158 561.2 374 76.7
Zm00001d048514 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 5.6e-158 560.1 401 73.3
Seita.9G571100 Setaria italica HOM04x5M002239 ORTHO04x5M002625 7.3e-158 559.7 374 77.0
Seita.9G200900 Setaria italica HOM04x5M002239 ORTHO04x5M002625 3.0e-143 511.1 375 69.9
LP000959 Lolium perenne HOM04x5M002239 ORTHO04x5M002625 5.1e-143 510.4 374 69.3
Pgl_GLEAN_10021628 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 4.8e-141 503.8 375 69.1
Bradi3g30210 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 8.1e-141 503.1 387 66.7
TraesCS1B02G190700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 2.4e-140 501.5 374 69.0
TRITD1Bv1G112470 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 2.4e-140 501.5 374 69.0
Sspon.01G0020910-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 7.6e-139 496.5 382 68.1
TraesCS1A02G173700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 7.6e-139 496.5 374 68.7
TraesCS1D02G165100 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.4e-137 492.3 375 68.5
TRITD1Av1G111900 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 3.2e-137 491.1 378 68.0
Zm00008a004043 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 3.0e-135 484.6 374 66.0
Sobic.001G201900 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 6.7e-135 483.4 375 65.9
OB10G22100 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 1.5e-134 482.3 375 67.2
Sspon.01G0020910-4D Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 6.9e-132 473.4 358 67.6
Oropetium_20150105_21335 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 2.0e-131 471.9 297 77.8
Aco016849 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 1.7e-130 468.8 377 65.5
LOC_Os10g35940 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 6.1e-128 460.3 374 64.2
Zm00007a00051636 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 2.0e-123 445.3 311 69.8
Sspon.01G0020910-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.1e-121 439.5 365 64.1
p5.00_sc00099_p0002 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 3.0e-119 431.4 378 59.5
Sspon.01G0000640-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 8.8e-119 429.9 374 63.4
Oropetium_20150105_09415 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 4.3e-118 427.6 375 62.4
Ma06_g35910 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 2.9e-114 414.8 389 56.0
Ma09_g03530 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 8.8e-111 403.3 386 55.7
GSVIVG01016464001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 9.1e-108 393.3 404 54.2
ATR0559G016 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 2.7e-104 381.7 418 50.5
evm.TU.AsparagusV1_08.3611.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 4.7e-104 380.9 373 54.4
Solyc05g052920.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 1.0e-103 379.8 404 52.7
Potri.010G197800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 1.4e-103 379.4 408 53.2
ASH_gene15508 Apostasia shenzhenica HOM04x5M002239 ORTHO04x5M002625 3.0e-103 378.3 390 54.6
Misin02G171600 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 3.9e-103 377.9 259 70.7
Potri.008G060600 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 2.8e-101 371.7 408 51.7
PEQU_09314 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 8.2e-101 370.2 396 52.5
Spipo6G0074700 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 6.8e-95 350.5 388 51.3
PH01000012G0660 Phyllostachys edulis HOM04x5M002239 ORTHO04x5M002625 1.3e-93 346.3 374 54.3
AT5G05980 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 1.4e-92 342.8 389 50.4
AT3G55630 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 9.1e-92 340.1 379 50.7
Zosma162g00210 Zostera marina HOM04x5M002239 ORTHO04x5M002625 2.0e-91 339.0 392 48.0
HORVU1Hr1G045670 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 2.7e-91 338.6 260 66.9
Misin01G184500 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 5.9e-91 337.4 260 67.7
CALSI_Maker00015974 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 8.5e-90 333.6 454 47.1
Zosma129g00040 Zostera marina HOM04x5M002239 ORTHO04x5M002625 6.8e-87 323.9 395 47.3
CALSI_Maker00013977 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 3.4e-86 321.6 422 45.7
CALSI_Maker00039217 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.4e-84 316.2 423 44.2
p5.00_sc00032_p0096 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 1.8e-84 315.8 423 44.0
Ma01_g05040 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 3.5e-83 311.6 418 45.0
PEQU_08658 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 1.0e-82 310.1 427 45.4
GSVIVG01033555001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 2.3e-82 308.9 426 43.2
AT3G10160 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 2.5e-81 305.4 413 44.6
ATR0721G042 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 8.0e-80 300.4 423 44.0
Aco002379 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 1.7e-77 292.7 436 43.1
gene16703 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 5.4e-76 287.7 396 44.4
gene29954 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 7.0e-76 287.3 396 44.2
Mapoly0010s0086 Marchantia polymorpha HOM04x5M002239 ORTHO04x5M002625 9.2e-68 260.4 411 39.4
gene7721 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.0e-67 259.2 392 41.1
gene850 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.7e-67 258.8 392 40.8
gene852 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.6e-67 258.1 392 40.8
Pp3c23_670 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 7.8e-67 257.3 342 43.9
gene1317 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 6.6e-66 254.2 386 41.7
Potri.016G041800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 3.3e-65 251.9 352 42.9
gene25554 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 9.5e-65 250.4 386 41.2
Spipo27G0015800 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 3.7e-61 238.4 302 47.7
evm.TU.AsparagusV1_05.14.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 1.1e-60 236.9 296 46.3
Pp3c24_9100 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 2.1e-59 232.6 354 40.4
Potri.006G045400 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 9.9e-54 213.8 256 46.5
Zjn_sc00092.1.g01510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002239 ORTHO04x5M002625 4.9e-53 211.5 175 64.0
evm.TU.AsparagusV1_08.3610.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 1.9e-49 199.5 267 41.9
Solyc04g016550.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 1.4e-47 193.4 345 36.5
MCO10G081 Micromonas commoda HOM04x5M002239 ORTHO04x5M002625 1.3e-45 186.8 415 35.4
PAB00011009 Picea abies HOM04x5M002239 ORTHO04x5M002625 3.1e-39 165.6 228 43.4
OsR498G1019001800.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 5.6e-33 144.8 121 67.8
Sspon.01G0020910-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 9.6e-33 144.1 120 67.5
PAB00050340 Picea abies HOM04x5M002239 ORTHO04x5M002625 2.0e-30 136.3 204 40.2
Cre05.g239100 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 2.5e-20 102.8 377 26.5
Cre05.g239067 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 4.1e-15 85.5 138 37.7
Zm00007a00051220 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 1.1e-12 77.4 82 56.1
Zm00007a00051700 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 1.3e-10 70.5 76 55.3
Oropetium_20150105_21336 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 1.3e-08 63.9 33 97.0
Zm00007a00000670 Zea mays B104 HOM04x5M002239 ORTHO04x5M017154 1.3e-08 63.9 33 97.0
Zm00001d025317 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 4.1e-07 58.9 33 90.9
Mapoly0084s0006 Marchantia polymorpha HOM04x5M004591 ORTHO04x5M005491 9.0e-07 57.8 263 28.1
Aco010714 Ananas comosus HOM04x5M004591 ORTHO04x5M005491 2.0e-06 56.6 257 27.2
ATR0661G386 Amborella trichopoda HOM04x5M004591 ORTHO04x5M005491 7.7e-06 54.7 258 27.5
gene32722 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 7.7e-06 54.7 253 27.7

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (2 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (8 genes)
Setaria italica (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (5 genes)
Triticum turgidum (3 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (4 genes)
Zea mays PH207 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings