Interactive Phylogenetics Module

Gene Id
PH01000017G1140

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
PH01000017G1140 Phyllostachys edulis HOM04x5M003314 ORTHO04x5M003993 2.7e-246 853.6 442 100.0
LOC_Os03g02540 Oryza sativa ssp. japonica HOM04x5M003314 ORTHO04x5M003993 7.6e-225 782.3 442 90.7
OsR498G0305122600.01 Oryza sativa ssp. indica HOM04x5M003314 ORTHO04x5M003993 7.6e-225 782.3 442 90.7
Seita.9G567600 Setaria italica HOM04x5M003314 ORTHO04x5M003993 4.2e-223 776.5 443 90.5
Pgl_GLEAN_10037791 Cenchrus americanus HOM04x5M003314 ORTHO04x5M003993 7.1e-223 775.8 443 90.7
Misin01G511700 Miscanthus sinensis HOM04x5M003314 ORTHO04x5M003993 1.9e-220 767.7 444 89.6
Sspon.01G0000970-3D Saccharum spontaneum HOM04x5M003314 ORTHO04x5M003993 7.3e-220 765.8 446 89.2
Misin02G489000 Miscanthus sinensis HOM04x5M003314 ORTHO04x5M003993 1.6e-219 764.6 444 89.4
Sobic.001G532100 Sorghum bicolor HOM04x5M003314 ORTHO04x5M003993 1.6e-219 764.6 444 89.2
OB03G11270 Oryza brachyantha HOM04x5M003314 ORTHO04x5M003993 3.6e-219 763.5 447 88.6
Sspon.01G0000970-2C Saccharum spontaneum HOM04x5M003314 ORTHO04x5M003993 3.6e-219 763.5 446 88.8
Sspon.01G0000970-1A Saccharum spontaneum HOM04x5M003314 ORTHO04x5M003993 8.1e-219 762.3 446 88.8
Bradi1g77440 Brachypodium distachyon HOM04x5M003314 ORTHO04x5M003993 1.1e-215 751.9 444 86.3
TraesCS5A02G525900 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 2.3e-213 744.2 444 86.9
TRITD5Av1G248300 Triticum turgidum HOM04x5M003314 ORTHO04x5M003993 2.3e-213 744.2 444 86.9
Zm00001d027359 Zea mays B73 HOM04x5M003314 ORTHO04x5M003993 3.8e-208 726.9 446 84.8
LP030288 Lolium perenne HOM04x5M003314 ORTHO04x5M003993 3.2e-207 723.8 445 83.6
TraesCS4D02G350200 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 1.2e-206 721.8 416 88.2
TraesCS4B02G356500 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 1.8e-205 718.0 415 88.0
TRITD4Bv1G197430 Triticum turgidum HOM04x5M003314 ORTHO04x5M003993 8.7e-205 715.7 415 87.7
HORVU4Hr1G086160 Hordeum vulgare HOM04x5M003314 ORTHO04x5M003993 4.8e-203 709.9 419 85.9
Zm00007a00047666 Zea mays B104 HOM04x5M003314 ORTHO04x5M003993 1.8e-202 708.0 446 83.4
HORVU1Hr1G048620 Hordeum vulgare HOM04x5M003314 ORTHO04x5M003993 4.8e-195 683.3 442 79.0
TraesCS1B02G196500 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 9.0e-194 679.1 440 79.5
TRITD1Bv1G116550 Triticum turgidum HOM04x5M003314 ORTHO04x5M003993 5.0e-192 673.3 440 79.1
Oropetium_20150105_21369 Oropetium thomaeum HOM04x5M003314 ORTHO04x5M003993 4.2e-191 670.2 382 90.6
Bradi3g31500 Brachypodium distachyon HOM04x5M003314 ORTHO04x5M003993 9.4e-191 669.1 442 77.4
LP006310 Lolium perenne HOM04x5M003314 ORTHO04x5M003993 2.7e-190 667.5 442 76.5
TRITD1Av1G123950 Triticum turgidum HOM04x5M003314 ORTHO04x5M003993 3.6e-190 667.2 440 78.6
PH01001621G0320 Phyllostachys edulis HOM04x5M003314 ORTHO04x5M003993 7.9e-190 666.0 497 73.0
TraesCS1A02G188800 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 3.0e-189 664.1 442 78.1
CALSI_Maker00046162 Calamus simplicifolius HOM04x5M003314 ORTHO04x5M003993 1.5e-188 661.8 428 77.1
Aco013882 Ananas comosus HOM04x5M003314 ORTHO04x5M003993 7.4e-188 659.4 444 76.1
ASH_gene20835 Apostasia shenzhenica HOM04x5M003314 ORTHO04x5M003993 2.0e-185 651.4 454 73.1
p5.00_sc00016_p0124 Elaeis guineensis HOM04x5M003314 ORTHO04x5M003993 1.9e-183 644.8 455 72.5
PEQU_16331 Phalaenopsis equestris HOM04x5M003314 ORTHO04x5M003993 9.4e-183 642.5 452 71.9
Ma11_g15940 Musa acuminata HOM04x5M003314 ORTHO04x5M003993 2.0e-180 634.8 406 77.8
Ma08_g11670 Musa acuminata HOM04x5M003314 ORTHO04x5M003993 7.0e-178 626.3 453 70.9
Ma11_g03120 Musa acuminata HOM04x5M003314 ORTHO04x5M003993 7.7e-177 622.9 410 75.4
Solyc01g091650.2 Solanum lycopersicum HOM04x5M003314 ORTHO04x5M003993 2.2e-176 621.3 439 70.6
GSVIVG01027510001 Vitis vinifera HOM04x5M003314 ORTHO04x5M003993 2.2e-176 621.3 441 70.1
Zosma21g00790 Zostera marina HOM04x5M003314 ORTHO04x5M003993 8.5e-176 619.4 419 72.8
TraesCS1D02G187600 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 6.7e-173 609.8 384 80.7
Mapoly0035s0029 Marchantia polymorpha HOM04x5M003314 ORTHO04x5M003993 9.7e-172 605.9 400 74.8
PAB00046468 Picea abies HOM04x5M003314 ORTHO04x5M003993 2.2e-171 604.7 414 72.0
Potri.002G154500 Populus trichocarpa HOM04x5M003314 ORTHO04x5M003993 1.4e-170 602.1 420 71.0
Pp3c11_20980 Physcomitrium patens HOM04x5M003314 ORTHO04x5M003993 1.8e-170 601.7 421 71.7
Potri.014G075500 Populus trichocarpa HOM04x5M003314 ORTHO04x5M003993 3.1e-170 600.9 435 69.4
AT3G61140 Arabidopsis thaliana HOM04x5M003314 ORTHO04x5M003993 1.2e-169 599.0 423 70.4
gene35429 Selaginella moellendorffii HOM04x5M003314 ORTHO04x5M003993 2.3e-165 584.7 415 70.8
gene32953 Selaginella moellendorffii HOM04x5M003314 ORTHO04x5M003993 2.3e-165 584.7 415 70.8
Zjn_sc00003.1.g14720.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003314 ORTHO04x5M003993 1.3e-152 542.3 442 67.4
ATR0757G035 Amborella trichopoda HOM04x5M003314 ORTHO04x5M003993 1.0e-149 532.7 356 73.6
Zosma21g00780 Zostera marina HOM04x5M003314 ORTHO04x5M003993 1.4e-149 532.3 414 63.8
Zjn_sc00002.1.g16850.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003314 ORTHO04x5M003993 2.1e-134 481.9 442 62.4
Sspon.01G0000970-1P Saccharum spontaneum HOM04x5M003314 ORTHO04x5M003993 1.5e-132 475.7 265 92.8
Zm00008a000106 Zea mays PH207 HOM04x5M003314 ORTHO04x5M003993 8.9e-125 449.9 308 77.6
Cre05.g234300 Chlamydomonas reinhardtii HOM04x5M003314 ORTHO04x5M003993 9.9e-124 446.4 416 55.8
CALSI_Maker00019818 Calamus simplicifolius HOM04x5M003314 ORTHO04x5M003993 2.2e-123 445.3 316 72.5
CALSI_Maker00019836 Calamus simplicifolius HOM04x5M003314 ORTHO04x5M003993 3.2e-122 441.4 310 72.3
MCO11G248 Micromonas commoda HOM04x5M003314 ORTHO04x5M003993 3.0e-112 408.3 400 52.2
Pp3c7_5660 Physcomitrium patens HOM04x5M003314 ORTHO04x5M003993 5.3e-109 397.5 272 69.5
HORVU6Hr1G027500 Hordeum vulgare HOM04x5M003314 ORTHO04x5M003993 1.2e-108 396.4 231 88.3
p5.00_sc00002_p0347 Elaeis guineensis HOM04x5M003314 ORTHO04x5M003993 4.2e-106 387.9 285 69.1
TraesCS7B02G257700 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 4.2e-106 387.9 384 54.7
TraesCS5D02G238500 Triticum aestivum HOM04x5M003314 ORTHO04x5M003993 8.7e-96 353.6 323 59.4
evm.TU.AsparagusV1_04.3089.V1.1 Asparagus officinalis HOM04x5M003314 ORTHO04x5M003993 2.2e-91 339.0 200 81.5
Spipo0G0147100 Spirodela polyrhiza HOM04x5M003314 ORTHO04x5M003993 1.1e-87 326.6 236 70.8
Zm00007a00037152 Zea mays B104 HOM04x5M003314 ORTHO04x5M003993 5.3e-77 291.2 237 69.2
Zm00001d048502 Zea mays B73 HOM04x5M003314 ORTHO04x5M003993 1.1e-61 240.4 158 79.1
evm.TU.AsparagusV1_10.1104.V1.1 Asparagus officinalis HOM04x5M003314 ORTHO04x5M003993 2.2e-51 206.1 213 49.8
evm.TU.AsparagusV1_10.1103.V1.1 Asparagus officinalis HOM04x5M003314 ORTHO04x5M003993 7.2e-50 201.1 197 54.8
HORVU0Hr1G029090 Hordeum vulgare HOM04x5M003314 ORTHO04x5M003993 4.8e-46 188.3 109 87.2
Zm00007a00040785 Zea mays B104 HOM04x5M003314 ORTHO04x5M003993 1.1e-42 177.2 94 91.5
Zjn_sc00085.1.g00890.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003314 ORTHO04x5M245506 2.7e-36 156.0 105 78.1
CALSI_Maker00047551 Calamus simplicifolius HOM04x5M003314 ORTHO04x5M003993 1.6e-28 130.2 83 79.5
Zm00008a000105 Zea mays PH207 HOM04x5M003314 ORTHO04x5M003993 5.9e-28 128.3 77 85.7
p5.00_sc00073_p0001 Elaeis guineensis HOM04x5M002554 ORTHO04x5M003484 8.6e-19 97.8 370 24.6
Aco008135 Ananas comosus HOM04x5M002554 ORTHO04x5M003484 2.5e-18 96.3 405 24.0
Ma08_g19050 Musa acuminata HOM04x5M002554 ORTHO04x5M003484 2.5e-18 96.3 370 24.3
Oropetium_20150105_02670 Oropetium thomaeum HOM04x5M002554 ORTHO04x5M003484 5.6e-18 95.1 371 25.1
Pp3c12_14600 Physcomitrium patens HOM04x5M002554 ORTHO04x5M003484 1.6e-17 93.6 384 24.0
Ma06_g13560 Musa acuminata HOM04x5M002554 ORTHO04x5M003484 4.7e-17 92.0 384 23.4
Zosma236g00080 Zostera marina HOM04x5M002554 ORTHO04x5M003484 4.7e-17 92.0 372 24.5
gene10033 Selaginella moellendorffii HOM04x5M002554 ORTHO04x5M003484 1.1e-16 90.9 198 28.3
Sobic.004G204800 Sorghum bicolor HOM04x5M002554 ORTHO04x5M003484 1.8e-16 90.1 240 27.1
gene15351 Selaginella moellendorffii HOM04x5M002554 ORTHO04x5M003484 2.3e-16 89.7 198 27.8
Potri.012G093500 Populus trichocarpa HOM04x5M002554 ORTHO04x5M003484 5.2e-16 88.6 240 26.2
Sspon.04G0008920-4D Saccharum spontaneum HOM04x5M002554 ORTHO04x5M003484 5.2e-16 88.6 367 23.2
TraesCS6B02G242700 Triticum aestivum HOM04x5M002554 ORTHO04x5M003484 5.2e-16 88.6 240 26.2
TRITD6Bv1G126300 Triticum turgidum HOM04x5M002554 ORTHO04x5M003484 5.2e-16 88.6 240 26.2
Zm00001d017117 Zea mays B73 HOM04x5M002554 ORTHO04x5M003484 5.2e-16 88.6 240 27.1
Zm00007a00032385 Zea mays B104 HOM04x5M002554 ORTHO04x5M003484 5.2e-16 88.6 240 27.1
ASH_gene1172 Apostasia shenzhenica HOM04x5M002554 ORTHO04x5M003484 6.8e-16 88.2 251 26.7
Misin07G393400 Miscanthus sinensis HOM04x5M002554 ORTHO04x5M003484 6.8e-16 88.2 240 26.7
Sspon.04G0008920-1A Saccharum spontaneum HOM04x5M002554 ORTHO04x5M003484 6.8e-16 88.2 240 26.7
TraesCS6D02G195300 Triticum aestivum HOM04x5M002554 ORTHO04x5M003484 6.8e-16 88.2 240 26.2
Misin08G190400 Miscanthus sinensis HOM04x5M002554 ORTHO04x5M003484 8.9e-16 87.8 240 26.7
PAB00007692 Picea abies HOM04x5M002554 ORTHO04x5M003484 8.9e-16 87.8 240 26.7
TraesCS6A02G212300 Triticum aestivum HOM04x5M002554 ORTHO04x5M003484 8.9e-16 87.8 240 26.2
TRITD6Av1G131880 Triticum turgidum HOM04x5M002554 ORTHO04x5M003484 8.9e-16 87.8 240 26.2
Sspon.04G0008920-2B Saccharum spontaneum HOM04x5M002554 ORTHO04x5M003484 1.2e-15 87.4 199 28.6
Sspon.04G0008920-1P Saccharum spontaneum HOM04x5M002554 ORTHO04x5M003484 1.2e-15 87.4 199 28.6
HORVU6Hr1G054100 Hordeum vulgare HOM04x5M002554 ORTHO04x5M003484 1.5e-15 87.0 240 26.2
LOC_Os02g38810 Oryza sativa ssp. japonica HOM04x5M002554 ORTHO04x5M003484 1.5e-15 87.0 240 25.8
OsR498G0204247700.01 Oryza sativa ssp. indica HOM04x5M002554 ORTHO04x5M003484 1.5e-15 87.0 240 25.8
Oropetium_20150105_11935 Oropetium thomaeum HOM04x5M002554 ORTHO04x5M003484 2.0e-15 86.7 240 25.8
LP025831 Lolium perenne HOM04x5M002554 ORTHO04x5M003484 2.6e-15 86.3 240 26.2
Pp3c10_7470 Physcomitrium patens HOM04x5M002554 ORTHO04x5M003484 2.6e-15 86.3 371 23.2
Seita.1G221200 Setaria italica HOM04x5M002554 ORTHO04x5M003484 2.6e-15 86.3 240 26.2
GSVIVG01007538001 Vitis vinifera HOM04x5M002554 ORTHO04x5M003484 2.6e-15 86.3 251 27.1
OB04G23880 Oryza brachyantha HOM04x5M002554 ORTHO04x5M003484 3.4e-15 85.9 312 23.4
LOC_Os04g40850 Oryza sativa ssp. japonica HOM04x5M002554 ORTHO04x5M003484 3.4e-15 85.9 367 22.9
PH01002852G0200 Phyllostachys edulis HOM04x5M002554 ORTHO04x5M003484 3.4e-15 85.9 240 25.8
Sspon.04G0008920-3C Saccharum spontaneum HOM04x5M002554 ORTHO04x5M003484 3.4e-15 85.9 367 23.7
PH01002064G0040 Phyllostachys edulis HOM04x5M002554 ORTHO04x5M003484 4.4e-15 85.5 240 25.4
OsR498G0408787500.01 Oryza sativa ssp. indica HOM04x5M002554 ORTHO04x5M003484 5.8e-15 85.1 240 26.7
OB02G30360 Oryza brachyantha HOM04x5M002554 ORTHO04x5M003484 7.5e-15 84.7 371 23.5
PH01000020G1340 Phyllostachys edulis HOM04x5M002554 ORTHO04x5M003484 7.5e-15 84.7 240 26.2
Bradi3g47880 Brachypodium distachyon HOM04x5M002554 ORTHO04x5M003484 1.3e-14 84.0 240 26.2
Pgl_GLEAN_10017771 Cenchrus americanus HOM04x5M002554 ORTHO04x5M003484 1.3e-14 84.0 239 25.9
Pgl_GLEAN_10025636 Cenchrus americanus HOM04x5M002554 ORTHO04x5M003484 1.7e-14 83.6 240 25.8
Sobic.006G126000 Sorghum bicolor HOM04x5M002554 ORTHO04x5M003484 1.7e-14 83.6 239 26.4
Sspon.05G0025010-1B Saccharum spontaneum HOM04x5M002554 ORTHO04x5M003484 1.7e-14 83.6 239 26.4
HORVU0Hr1G004970 Hordeum vulgare HOM04x5M002554 ORTHO04x5M003484 2.2e-14 83.2 240 25.8
HORVU2Hr1G083860 Hordeum vulgare HOM04x5M002554 ORTHO04x5M003484 2.2e-14 83.2 371 23.2
Seita.7G143500 Setaria italica HOM04x5M002554 ORTHO04x5M003484 2.2e-14 83.2 370 23.2
Misin11G118700 Miscanthus sinensis HOM04x5M002554 ORTHO04x5M003484 3.7e-14 82.4 239 26.4
Spipo15G0006700 Spirodela polyrhiza HOM04x5M002554 ORTHO04x5M003484 3.7e-14 82.4 251 26.3
PEQU_26885 Phalaenopsis equestris HOM04x5M002554 ORTHO04x5M003484 4.9e-14 82.0 251 25.5
Zm00001d003257 Zea mays B73 HOM04x5M002554 ORTHO04x5M003484 4.9e-14 82.0 239 25.9
Zm00007a00004820 Zea mays B104 HOM04x5M002554 ORTHO04x5M003484 4.9e-14 82.0 239 25.9
Zm00008a007053 Zea mays PH207 HOM04x5M002554 ORTHO04x5M003484 4.9e-14 82.0 239 25.9
AT4G24820 Arabidopsis thaliana HOM04x5M002554 ORTHO04x5M003484 6.4e-14 81.6 316 23.4
CALSI_Maker00047487 Calamus simplicifolius HOM04x5M002554 ORTHO04x5M003484 6.4e-14 81.6 239 25.5
CALSI_Maker00025444 Calamus simplicifolius HOM04x5M002554 ORTHO04x5M003484 6.4e-14 81.6 239 25.5
CALSI_Maker00016328 Calamus simplicifolius HOM04x5M002554 ORTHO04x5M003484 6.4e-14 81.6 239 25.5
Misin12G122000 Miscanthus sinensis HOM04x5M002554 ORTHO04x5M003484 8.3e-14 81.3 239 25.9
Mapoly0014s0216 Marchantia polymorpha HOM04x5M002554 ORTHO04x5M003484 4.1e-13 79.0 388 22.4
MCO04G155 Micromonas commoda HOM04x5M002554 ORTHO04x5M003484 5.4e-13 78.6 327 21.1
HORVU7Hr1G069880 Hordeum vulgare HOM04x5M003314 ORTHO04x5M003993 9.2e-13 77.8 42 95.2
Zm00008a022240 Zea mays PH207 HOM04x5M002554 ORTHO04x5M003484 2.7e-12 76.3 150 30.0
Cre13.g581450 Chlamydomonas reinhardtii HOM04x5M002554 ORTHO04x5M003484 2.3e-11 73.2 342 20.8
AT3G12850 Arabidopsis thaliana HOM04x5M003314 ORTHO04x5M046033 3.0e-11 72.8 373 24.1
CALSI_Maker00040674 Calamus simplicifolius HOM04x5M002554 ORTHO04x5M003484 3.4e-07 59.3 136 26.5
Zjn_sc00006.1.g00360.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002554 ORTHO04x5M003484 4.4e-07 58.9 136 27.2
Zjn_sc00037.1.g02380.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002554 ORTHO04x5M003484 9.9e-07 57.8 136 26.5

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (8 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (2 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (8 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (4 genes)
Picea abies (2 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (3 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (11 genes)
Triticum turgidum (6 genes)
Vitis vinifera (2 genes)
Zea mays B73 (4 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (5 genes)

Program Settings