Interactive Phylogenetics Module

Gene Id
PAB00023953

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
PAB00023953 Picea abies HOM04x5M001304 ORTHO04x5M002223 0.0e+00 2672.1 1496 100.0
Pp3c19_3610 Physcomitrium patens HOM04x5M001304 ORTHO04x5M002223 1.5e-296 1022.3 1182 48.4
Zosma39g00230 Zostera marina HOM04x5M001304 ORTHO04x5M002223 8.9e-294 1013.1 1187 47.1
AT3G23890 Arabidopsis thaliana HOM04x5M001304 ORTHO04x5M002223 1.5e-293 1012.3 1202 47.6
Potri.001G264000 Populus trichocarpa HOM04x5M001304 ORTHO04x5M002223 1.3e-292 1009.2 1182 47.7
Potri.009G058900 Populus trichocarpa HOM04x5M001304 ORTHO04x5M002223 1.9e-291 1005.4 1183 47.3
p5.00_sc00075_p0055 Elaeis guineensis HOM04x5M001304 ORTHO04x5M002223 1.6e-290 1002.3 1193 47.4
Spipo8G0027100 Spirodela polyrhiza HOM04x5M001304 ORTHO04x5M002223 4.6e-290 1000.7 1170 47.4
Ma06_g02860 Musa acuminata HOM04x5M001304 ORTHO04x5M002223 7.8e-290 1000.0 1175 46.5
gene30687 Selaginella moellendorffii HOM04x5M001304 ORTHO04x5M002223 7.8e-290 1000.0 1171 47.4
ATR0332G038 Amborella trichopoda HOM04x5M001304 ORTHO04x5M002223 1.3e-289 999.2 1164 47.4
Ma05_g03540 Musa acuminata HOM04x5M001304 ORTHO04x5M002223 7.3e-288 993.4 1165 47.1
GSVIVG01032138001 Vitis vinifera HOM04x5M001304 ORTHO04x5M002223 7.3e-288 993.4 1178 48.2
Solyc01g087500.2 Solanum lycopersicum HOM04x5M001304 ORTHO04x5M002223 9.6e-288 993.0 1176 47.1
Mapoly0050s0134 Marchantia polymorpha HOM04x5M001304 ORTHO04x5M002223 2.1e-287 991.9 1184 47.2
PEQU_07444 Phalaenopsis equestris HOM04x5M001304 ORTHO04x5M002223 2.1e-287 991.9 1180 47.0
Pgl_GLEAN_10010689 Cenchrus americanus HOM04x5M001304 ORTHO04x5M002223 1.8e-286 988.8 1159 47.1
gene13922 Selaginella moellendorffii HOM04x5M001304 ORTHO04x5M002223 1.8e-286 988.8 1188 46.8
Pp3c18_20261 Physcomitrium patens HOM04x5M001304 ORTHO04x5M002223 2.4e-286 988.4 1168 47.9
Pp3c18_20260 Physcomitrium patens HOM04x5M001304 ORTHO04x5M002223 2.4e-286 988.4 1168 47.9
Cre01.g009250 Chlamydomonas reinhardtii HOM04x5M001304 ORTHO04x5M002223 6.9e-286 986.9 1168 45.8
Sobic.004G271300 Sorghum bicolor HOM04x5M001304 ORTHO04x5M002223 1.3e-284 982.6 1161 46.7
Misin08G251500 Miscanthus sinensis HOM04x5M001304 ORTHO04x5M002223 6.4e-284 980.3 1162 46.5
LP016242 Lolium perenne HOM04x5M001304 ORTHO04x5M002223 8.4e-284 979.9 1192 45.8
MCO05G739 Micromonas commoda HOM04x5M001304 ORTHO04x5M002223 4.2e-283 977.6 1170 46.1
HORVU6Hr1G067930 Hordeum vulgare HOM04x5M001304 ORTHO04x5M002223 7.1e-283 976.9 1191 46.0
Seita.1G284800 Setaria italica HOM04x5M001304 ORTHO04x5M002223 3.5e-282 974.5 1153 46.1
TraesCS6B02G295700 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 6.0e-282 973.8 1190 45.7
TraesCS6A02G268600 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 1.3e-281 972.6 1206 45.4
TraesCS1B02G271100 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 1.7e-281 972.2 1181 45.9
TRITD1Bv1G150840 Triticum turgidum HOM04x5M001304 ORTHO04x5M002223 1.7e-281 972.2 1181 45.9
evm.TU.AsparagusV1_04.918.V1.1 Asparagus officinalis HOM04x5M001304 ORTHO04x5M002223 3.0e-281 971.5 1125 48.0
Bradi3g52470 Brachypodium distachyon HOM04x5M001304 ORTHO04x5M002223 3.9e-281 971.1 1195 46.5
TraesCS1D02G260500 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 1.1e-280 969.5 1183 45.8
TRITD6Av1G170670 Triticum turgidum HOM04x5M001304 ORTHO04x5M002223 1.1e-280 969.5 1210 45.2
PH01000690G0430 Phyllostachys edulis HOM04x5M001304 ORTHO04x5M002223 4.3e-280 967.6 1182 46.0
TRITD6Bv1G156950 Triticum turgidum HOM04x5M001304 ORTHO04x5M002223 4.3e-280 967.6 1190 45.5
TraesCS6D02G246300 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 5.6e-280 967.2 1194 45.6
Misin07G455800 Miscanthus sinensis HOM04x5M001304 ORTHO04x5M002223 7.4e-280 966.8 1159 45.6
TraesCS1A02G260500 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 1.3e-279 966.1 1187 45.6
TRITD1Av1G165100 Triticum turgidum HOM04x5M001304 ORTHO04x5M002223 1.3e-279 966.1 1187 45.6
Sspon.04G0005560-3C Saccharum spontaneum HOM04x5M001304 ORTHO04x5M002223 2.8e-279 964.9 1195 45.4
PAB00050433 Picea abies HOM04x5M001304 ORTHO04x5M002223 3.6e-279 964.5 1165 46.8
OsR498G0204598600.01 Oryza sativa ssp. indica HOM04x5M001304 ORTHO04x5M002223 6.2e-279 963.8 1183 45.8
PAB00022221 Picea abies HOM04x5M001304 ORTHO04x5M002223 6.2e-279 963.8 1125 47.9
LOC_Os02g47150 Oryza sativa ssp. japonica HOM04x5M001304 ORTHO04x5M002223 8.1e-279 963.4 1183 45.8
Zm00007a00022230 Zea mays B104 HOM04x5M001304 ORTHO04x5M002223 3.1e-278 961.4 1157 46.2
Aco015983 Ananas comosus HOM04x5M001304 ORTHO04x5M002223 1.3e-276 956.1 1109 48.1
Zm00007a00017380 Zea mays B104 HOM04x5M001304 ORTHO04x5M002223 1.3e-276 956.1 1172 45.6
Zm00008a022725 Zea mays PH207 HOM04x5M001304 ORTHO04x5M002223 1.3e-276 956.1 1172 45.6
ASH_gene4260 Apostasia shenzhenica HOM04x5M001304 ORTHO04x5M002223 1.7e-276 955.7 1171 46.9
Zm00001d017720 Zea mays B73 HOM04x5M001304 ORTHO04x5M002223 3.8e-276 954.5 1172 45.6
OB02G36210 Oryza brachyantha HOM04x5M001304 ORTHO04x5M002223 6.0e-274 947.2 1177 45.6
Sspon.04G0005560-4D Saccharum spontaneum HOM04x5M001304 ORTHO04x5M002223 8.4e-268 926.8 1165 45.5
PH01001295G0450 Phyllostachys edulis HOM04x5M001304 ORTHO04x5M002223 1.6e-258 896.0 1357 40.1
Zm00001d051542 Zea mays B73 HOM04x5M001304 ORTHO04x5M002223 1.8e-254 882.5 874 52.7
Zm00008a017029 Zea mays PH207 HOM04x5M001304 ORTHO04x5M002223 1.8e-254 882.5 874 52.7
Sspon.04G0023350-1B Saccharum spontaneum HOM04x5M001304 ORTHO04x5M002223 5.7e-248 860.9 1161 43.2
gene37683 Selaginella moellendorffii HOM04x5M001304 ORTHO04x5M002223 6.1e-234 814.3 1002 46.3
Sspon.04G0005560-1A Saccharum spontaneum HOM04x5M001304 ORTHO04x5M002223 8.8e-233 810.4 1161 41.4
CALSI_Maker00031687 Calamus simplicifolius HOM04x5M001304 ORTHO04x5M002223 1.3e-162 577.4 1199 34.4
Zjn_sc00007.1.g07940.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M001304 ORTHO04x5M002223 2.1e-141 506.9 733 42.4
Zjn_sc00033.1.g00820.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M001304 ORTHO04x5M002223 1.6e-133 480.7 734 40.3
Misin16G182500 Miscanthus sinensis HOM04x5M001304 ORTHO04x5M002223 1.7e-130 470.7 716 39.2
TraesCS5B02G062800 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 1.0e-79 302.0 384 45.1
TRITD5Bv1G026240 Triticum turgidum HOM04x5M001304 ORTHO04x5M002223 1.0e-79 302.0 384 45.1
TraesCS5B02G062600 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 3.0e-79 300.4 396 43.4
TRITD5Bv1G026150 Triticum turgidum HOM04x5M001304 ORTHO04x5M002223 4.7e-77 293.1 345 47.0
TraesCS5D02G064800 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 1.1e-76 292.0 393 43.3
TraesCS7A02G157900 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 2.9e-74 283.9 401 42.4
PH01001711G0340 Phyllostachys edulis HOM04x5M001304 ORTHO04x5M002223 2.3e-71 274.2 398 40.2
OB06G13830 Oryza brachyantha HOM04x5M001304 ORTHO04x5M002223 1.1e-68 265.4 385 40.5
Pgl_GLEAN_10007784 Cenchrus americanus HOM04x5M002170 ORTHO04x5M002516 5.8e-67 259.6 403 40.0
TraesCS7A02G157800 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 1.6e-61 241.5 353 40.8
TraesCS5B02G062900 Triticum aestivum HOM04x5M001304 ORTHO04x5M002223 3.6e-61 240.4 488 33.8
OB06G13680 Oryza brachyantha HOM04x5M001304 ORTHO04x5M002223 8.1e-61 239.2 380 38.4
LOC_Os01g13310 Oryza sativa ssp. japonica HOM04x5M001304 ORTHO04x5M002223 6.0e-56 223.0 398 35.9
Sspon.08G0005790-1A Saccharum spontaneum HOM04x5M001304 ORTHO04x5M002223 2.3e-55 221.1 359 37.3
Misin16G253600 Miscanthus sinensis HOM04x5M001304 ORTHO04x5M002223 2.4e-49 201.1 361 34.6
ASH_gene8619 Apostasia shenzhenica HOM04x5M005388 ORTHO04x5M007148 1.8e-36 158.3 627 27.3
Sobic.010G141400 Sorghum bicolor HOM04x5M001304 ORTHO04x5M002223 3.1e-36 157.5 148 54.1
LOC_Os01g16290 Oryza sativa ssp. japonica HOM04x5M005388 ORTHO04x5M007148 2.0e-35 154.8 688 24.7
OsR498G0100627500.01 Oryza sativa ssp. indica HOM04x5M005388 ORTHO04x5M007148 2.0e-35 154.8 688 24.7
Ma10_g12880 Musa acuminata HOM04x5M005388 ORTHO04x5M007148 3.4e-35 154.1 686 25.9
Oropetium_20150105_09653 Oropetium thomaeum HOM04x5M005388 ORTHO04x5M007148 3.4e-35 154.1 629 26.4
Seita.5G048400 Setaria italica HOM04x5M005388 ORTHO04x5M007148 4.5e-35 153.7 662 25.5
Aco014991 Ananas comosus HOM04x5M005388 ORTHO04x5M007148 2.2e-34 151.4 663 27.6
evm.TU.AsparagusV1_07.1717.V1.1 Asparagus officinalis HOM04x5M005388 ORTHO04x5M007148 3.8e-34 150.6 626 28.1
OB01G20820 Oryza brachyantha HOM04x5M005388 ORTHO04x5M007148 3.8e-34 150.6 659 25.3
ATR0759G018 Amborella trichopoda HOM04x5M005388 ORTHO04x5M007148 6.5e-34 149.8 667 25.8
LP034073 Lolium perenne HOM04x5M005388 ORTHO04x5M007148 8.4e-34 149.4 637 25.3
Spipo29G0006100 Spirodela polyrhiza HOM04x5M005388 ORTHO04x5M007148 8.4e-34 149.4 612 27.3
Zm00007a00011064 Zea mays B104 HOM04x5M005388 ORTHO04x5M007148 8.4e-34 149.4 687 25.0
Bradi2g10040 Brachypodium distachyon HOM04x5M005388 ORTHO04x5M007148 3.2e-33 147.5 666 25.4
Sobic.003G125900 Sorghum bicolor HOM04x5M005388 ORTHO04x5M007148 5.5e-33 146.7 683 24.9
HORVU3Hr1G038050 Hordeum vulgare HOM04x5M005388 ORTHO04x5M007148 7.1e-33 146.4 690 24.8
Pgl_GLEAN_10008109 Cenchrus americanus HOM04x5M001304 ORTHO04x5M002223 1.2e-32 145.6 355 29.3
Misin06G107400 Miscanthus sinensis HOM04x5M005388 ORTHO04x5M007148 1.2e-32 145.6 683 24.9
TraesCS3D02G188800 Triticum aestivum HOM04x5M005388 ORTHO04x5M007148 1.6e-32 145.2 637 25.4
Misin05G123900 Miscanthus sinensis HOM04x5M005388 ORTHO04x5M007148 3.5e-32 144.1 653 25.3
TRITD3Bv1G092550 Triticum turgidum HOM04x5M005388 ORTHO04x5M007148 3.5e-32 144.1 637 25.4
TraesCS3B02G214600 Triticum aestivum HOM04x5M005388 ORTHO04x5M007148 4.6e-32 143.7 637 25.3
CALSI_Maker00044897 Calamus simplicifolius HOM04x5M005388 ORTHO04x5M007148 6.0e-32 143.3 700 26.3
TraesCS3A02G184800 Triticum aestivum HOM04x5M005388 ORTHO04x5M007148 5.1e-31 140.2 663 25.0
GSVIVG01033639001 Vitis vinifera HOM04x5M005388 ORTHO04x5M007148 1.1e-30 139.0 693 24.5
PEQU_33484 Phalaenopsis equestris HOM04x5M005388 ORTHO04x5M007148 2.5e-30 137.9 636 25.0
Pp3c22_3710 Physcomitrium patens HOM04x5M005388 ORTHO04x5M007148 4.3e-30 137.1 671 25.3
Zosma62g00210 Zostera marina HOM04x5M005388 ORTHO04x5M007148 4.3e-30 137.1 725 25.2
AT3G10270 Arabidopsis thaliana HOM04x5M005388 ORTHO04x5M007148 5.7e-30 136.7 713 25.0
Sspon.03G0016850-1A Saccharum spontaneum HOM04x5M005388 ORTHO04x5M007148 5.7e-30 136.7 671 24.0
AT5G04130 Arabidopsis thaliana HOM04x5M005388 ORTHO04x5M007148 7.4e-30 136.3 658 25.5
Pp3c19_5200 Physcomitrium patens HOM04x5M005388 ORTHO04x5M007148 7.4e-30 136.3 805 25.3
Bradi3g38850 Brachypodium distachyon HOM04x5M001304 ORTHO04x5M002223 2.2e-29 134.8 336 28.9
Solyc12g021230.1 Solanum lycopersicum HOM04x5M005388 ORTHO04x5M007148 3.1e-28 131.0 724 24.4
Pgl_GLEAN_10018499 Cenchrus americanus HOM04x5M001304 ORTHO04x5M002223 1.5e-27 128.6 414 27.3
Potri.006G039400 Populus trichocarpa HOM04x5M005388 ORTHO04x5M007148 5.9e-27 126.7 648 25.0
Mapoly0001s0398 Marchantia polymorpha HOM04x5M005388 ORTHO04x5M007148 3.8e-26 124.0 644 26.4
gene34990 Selaginella moellendorffii HOM04x5M005388 ORTHO04x5M007148 1.6e-24 118.6 691 23.9
gene4693 Selaginella moellendorffii HOM04x5M005388 ORTHO04x5M007148 6.1e-24 116.7 691 23.7
Sspon.03G0016850-2B Saccharum spontaneum HOM04x5M005388 ORTHO04x5M007148 3.0e-23 114.4 511 25.0
LP006554 Lolium perenne HOM04x5M005388 ORTHO04x5M007148 5.1e-23 113.6 648 23.6
CALSI_Maker00039251 Calamus simplicifolius HOM04x5M001304 ORTHO04x5M002223 1.1e-22 112.5 95 50.5
MCO09G035 Micromonas commoda HOM04x5M005388 ORTHO04x5M007148 5.7e-22 110.2 590 24.2
Misin01G498800 Miscanthus sinensis HOM04x5M001304 ORTHO04x5M002223 5.7e-22 110.2 153 43.8
Misin08G195200 Miscanthus sinensis HOM04x5M001304 ORTHO04x5M002223 1.8e-20 105.1 197 34.0
Sobic.001G520600 Sorghum bicolor HOM04x5M001304 ORTHO04x5M002223 3.4e-19 100.9 127 44.1
PH01001176G0410 Phyllostachys edulis HOM04x5M001304 ORTHO04x5M002223 7.2e-17 93.2 145 40.0
Bradi3g38860 Brachypodium distachyon HOM04x5M001304 ORTHO04x5M002223 6.1e-16 90.1 295 26.4
PAB00001853 Picea abies HOM04x5M001304 ORTHO04x5M002223 1.4e-15 89.0 89 49.4
Pgl_GLEAN_10012862 Cenchrus americanus HOM04x5M001304 ORTHO04x5M002223 1.1e-14 85.9 291 23.7
Zm00007a00034619 Zea mays B104 HOM04x5M001304 ORTHO04x5M002223 2.6e-14 84.7 217 27.6
Zm00008a017262 Zea mays PH207 HOM04x5M001304 ORTHO04x5M002223 2.6e-14 84.7 217 27.6
LP022376 Lolium perenne HOM04x5M001304 ORTHO04x5M002223 9.7e-14 82.8 189 27.5
Potri.010G247000 Populus trichocarpa HOM04x5M005523 ORTHO04x5M008710 2.2e-13 81.6 166 31.9
CALSI_Maker00039237 Calamus simplicifolius HOM04x5M001304 ORTHO04x5M002223 6.3e-13 80.1 79 53.2
Cre04.g221650 Chlamydomonas reinhardtii HOM04x5M005523 ORTHO04x5M008710 2.4e-12 78.2 173 31.2
gene21749 Selaginella moellendorffii HOM04x5M005523 ORTHO04x5M008710 3.1e-12 77.8 174 31.0
gene30020 Selaginella moellendorffii HOM04x5M005523 ORTHO04x5M008710 3.1e-12 77.8 174 31.0
Cre10.g440750 Chlamydomonas reinhardtii HOM04x5M005388 ORTHO04x5M007148 4.1e-12 77.4 355 24.2
AT3G10690 Arabidopsis thaliana HOM04x5M005523 ORTHO04x5M008710 1.2e-11 75.9 166 30.1
CALSI_Maker00002073 Calamus simplicifolius HOM04x5M005523 ORTHO04x5M008710 2.0e-11 75.1 174 29.9
PAB00013877 Picea abies HOM04x5M005388 ORTHO04x5M007148 2.6e-11 74.7 204 30.4
ATR0068G093 Amborella trichopoda HOM04x5M005523 ORTHO04x5M008710 4.5e-11 73.9 166 30.7
Solyc01g096900.2 Solanum lycopersicum HOM04x5M005523 ORTHO04x5M008710 7.7e-11 73.2 173 30.1
MCO10G205 Micromonas commoda HOM04x5M005523 ORTHO04x5M008710 1.3e-10 72.4 368 24.2
PEQU_07476 Phalaenopsis equestris HOM04x5M001304 ORTHO04x5M002223 2.2e-10 71.6 53 54.7
Mapoly0010s0185 Marchantia polymorpha HOM04x5M005523 ORTHO04x5M008710 2.9e-10 71.2 174 29.3
p5.00_sc00003_p0422 Elaeis guineensis HOM04x5M005523 ORTHO04x5M008710 3.8e-10 70.9 172 30.8
Pp3c8_18800 Physcomitrium patens HOM04x5M005523 ORTHO04x5M008710 1.1e-09 69.3 166 30.1
Ma05_g24160 Musa acuminata HOM04x5M005523 ORTHO04x5M008710 1.9e-09 68.6 173 28.3
Zjn_sc00006.1.g04090.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M001304 ORTHO04x5M002223 1.9e-09 68.6 93 45.2
Zm00008a011552 Zea mays PH207 HOM04x5M005388 ORTHO04x5M007148 2.5e-09 68.2 184 29.3
CALSI_Maker00039230 Calamus simplicifolius HOM04x5M001304 ORTHO04x5M002223 4.2e-09 67.4 138 31.9
Zm00001d051817 Zea mays B73 HOM04x5M001304 ORTHO04x5M002223 9.4e-09 66.2 171 26.9
Pgl_GLEAN_10021283 Cenchrus americanus HOM04x5M005388 ORTHO04x5M007148 2.7e-08 64.7 288 25.0
Potri.016G036166 Populus trichocarpa HOM04x5M005388 ORTHO04x5M007148 3.0e-07 61.2 136 31.6
Zjn_sc00043.1.g02500.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005388 ORTHO04x5M007148 9.7e-06 56.2 146 27.4

Amborella trichopoda (3 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (4 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (6 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (4 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (3 genes)
Miscanthus sinensis (8 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (4 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (6 genes)
Picea abies (5 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (7 genes)
Setaria italica (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (4 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (15 genes)
Triticum turgidum (7 genes)
Vitis vinifera (2 genes)
Zea mays B73 (3 genes)
Zea mays B104 (4 genes)
Zea mays PH207 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

Program Settings