Interactive Phylogenetics Module

Gene Id
OsR498G0102541400.01

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsR498G0102541400.01 Oryza sativa ssp. indica HOM04x5M005382 ORTHO04x5M006527 1.8e-285 984.2 600 100.0
OB01G49790 Oryza brachyantha HOM04x5M005382 ORTHO04x5M006527 1.2e-265 918.3 603 93.7
LOC_Os01g67920 Oryza sativa ssp. japonica HOM04x5M005382 ORTHO04x5M006527 3.9e-240 833.6 501 100.0
Bradi2g58077 Brachypodium distachyon HOM04x5M005382 ORTHO04x5M006527 4.0e-237 823.5 602 79.9
Sobic.003G394300 Sorghum bicolor HOM04x5M005382 ORTHO04x5M006527 9.0e-237 822.4 601 75.7
Seita.5G420200 Setaria italica HOM04x5M005382 ORTHO04x5M006527 9.0e-237 822.4 602 79.4
Misin06G362700 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 3.8e-235 817.0 600 75.2
Zm00001d042450 Zea mays B73 HOM04x5M005382 ORTHO04x5M006527 1.4e-234 815.1 553 80.1
Zm00007a00017129 Zea mays B104 HOM04x5M005382 ORTHO04x5M006527 1.4e-234 815.1 553 80.1
LP034953 Lolium perenne HOM04x5M005382 ORTHO04x5M006527 7.9e-233 809.3 559 80.5
Pgl_GLEAN_10010471 Cenchrus americanus HOM04x5M005382 ORTHO04x5M006527 2.3e-232 807.7 573 78.0
TraesCS3D02G383400 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 8.1e-230 799.3 599 78.1
TraesCS3B02G422600 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 2.1e-225 784.6 603 76.6
TraesCS3A02G390800 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 2.5e-223 777.7 604 76.3
HORVU3Hr1G088460 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 4.8e-222 773.5 558 80.6
HORVU3Hr1G088480 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 5.5e-218 760.0 514 81.9
TRITD3Bv1G217010 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 1.3e-216 755.4 605 74.4
TRITD3Av1G230650 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 4.3e-215 750.4 578 74.2
Misin06G412600 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 1.2e-212 742.3 465 85.8
PH01000229G0250 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 4.6e-209 730.3 635 68.2
Zm00008a013007 Zea mays PH207 HOM04x5M005382 ORTHO04x5M006527 7.4e-207 723.0 512 74.8
Sspon.03G0028620-2C Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 9.7e-199 696.0 837 52.8
Aco024203 Ananas comosus HOM04x5M005382 ORTHO04x5M006527 9.1e-197 689.5 510 69.0
evm.TU.AsparagusV1_04.597.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 2.1e-185 651.7 552 60.9
Ma08_g08710 Musa acuminata HOM04x5M005382 ORTHO04x5M006527 6.8e-184 646.7 558 60.0
PEQU_32184 Phalaenopsis equestris HOM04x5M005382 ORTHO04x5M006527 1.2e-172 609.4 510 59.8
Oropetium_20150105_13135 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 1.6e-169 599.0 438 73.1
GSVIVG01007574001 Vitis vinifera HOM04x5M005382 ORTHO04x5M006527 1.8e-168 595.5 580 55.9
Solyc06g071850.2 Solanum lycopersicum HOM04x5M005382 ORTHO04x5M006527 4.1e-157 557.8 565 53.3
PH01000031G1370 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 2.5e-154 548.5 630 54.3
ATR0824G019 Amborella trichopoda HOM04x5M005382 ORTHO04x5M006527 2.4e-149 531.9 590 51.4
CALSI_Maker00005234 Calamus simplicifolius HOM04x5M005382 ORTHO04x5M006527 4.1e-149 531.2 571 53.8
AT5G63200 Arabidopsis thaliana HOM04x5M005382 ORTHO04x5M006527 3.3e-146 521.5 579 54.1
p5.00_sc00130_p0062 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 2.6e-143 511.9 636 48.3
Zosma79g00200 Zostera marina HOM04x5M005382 ORTHO04x5M006527 8.4e-142 506.9 556 50.2
Potri.012G092000 Populus trichocarpa HOM04x5M005382 ORTHO04x5M006527 4.9e-134 481.1 565 48.8
Sspon.03G0028540-1B Saccharum spontaneum HOM04x5M000049 ORTHO04x5M006527 9.9e-119 430.3 352 71.9
gene5094 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 5.5e-117 424.5 478 48.1
gene7444 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 5.5e-117 424.5 478 48.1
ASH_gene1600 Apostasia shenzhenica HOM04x5M005382 ORTHO04x5M006527 1.6e-113 412.9 555 44.5
Mapoly0013s0178 Marchantia polymorpha HOM04x5M005382 ORTHO04x5M006527 1.3e-110 403.3 575 43.3
Spipo4G0035200 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 1.0e-75 287.3 282 53.9
Spipo4G0035300 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 2.6e-66 256.1 244 55.3
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.6e-60 236.9 156 77.6
Oropetium_20150105_13136 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 5.6e-45 185.3 111 86.5
PAB00064933 Picea abies HOM04x5M005382 ORTHO04x5M006527 3.7e-41 172.6 144 60.4
evm.TU.AsparagusV1_05.2410.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 2.5e-37 159.8 138 55.1
Zjn_sc00034.1.g03860.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005382 ORTHO04x5M006527 5.6e-37 158.7 240 50.0
evm.TU.AsparagusV1_08.1960.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 7.3e-37 158.3 130 56.9
PAB00061745 Picea abies HOM04x5M005382 ORTHO04x5M006527 3.6e-28 129.4 122 54.1
evm.TU.AsparagusV1_08.2080.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 8.4e-25 118.2 98 54.1
PAB00034029 Picea abies HOM04x5M005382 ORTHO04x5M006527 3.0e-22 109.8 89 58.4
p5.00_sc00032_p0015 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 2.9e-17 93.2 86 57.0
Sspon.03G0028620-1B Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 1.9e-13 80.5 91 68.1
p5.00_sc00032_p0014 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 4.0e-11 72.8 83 49.4
PAB00026557 Picea abies HOM04x5M005382 ORTHO04x5M006527 8.4e-09 65.1 64 53.1

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (4 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings