Interactive Phylogenetics Module

Gene Id
OsR498G0101607600.01

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsR498G0101607600.01 Oryza sativa ssp. indica HOM04x5M005494 ORTHO04x5M007414 5.2e-83 309.7 158 100.0
LOC_Os01g44980 Oryza sativa ssp. japonica HOM04x5M005494 ORTHO04x5M007414 1.8e-67 258.1 129 100.0
LOC_Os01g45070 Oryza sativa ssp. japonica HOM04x5M005494 ORTHO04x5M007414 5.2e-67 256.5 129 99.2
OsR498G0101612800.01 Oryza sativa ssp. indica HOM04x5M005494 ORTHO04x5M007414 5.2e-67 256.5 129 99.2
OB01G33320 Oryza brachyantha HOM04x5M005494 ORTHO04x5M007414 2.2e-65 251.1 133 94.0
TRITD3Av1G152270 Triticum turgidum HOM04x5M005494 ORTHO04x5M007414 1.5e-61 238.4 156 76.9
Zjn_sc00133.1.g00840.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005494 ORTHO04x5M007414 1.5e-61 238.4 129 89.9
Seita.5G239200 Setaria italica HOM04x5M005494 ORTHO04x5M007414 2.1e-60 234.6 129 89.1
TraesCS3A02G225700 Triticum aestivum HOM04x5M005494 ORTHO04x5M007414 2.8e-60 234.2 129 89.1
TraesCS3D02G223800 Triticum aestivum HOM04x5M005494 ORTHO04x5M007414 4.7e-60 233.4 129 89.1
Sobic.003G232700 Sorghum bicolor HOM04x5M005494 ORTHO04x5M007414 6.1e-60 233.0 129 88.4
Sspon.03G0010470-1A Saccharum spontaneum HOM04x5M005494 ORTHO04x5M007414 6.1e-60 233.0 129 88.4
Sspon.03G0010470-3C Saccharum spontaneum HOM04x5M005494 ORTHO04x5M007414 6.1e-60 233.0 129 88.4
Sspon.03G0010470-2B Saccharum spontaneum HOM04x5M005494 ORTHO04x5M007414 6.1e-60 233.0 129 88.4
Zm00001d011445 Zea mays B73 HOM04x5M005494 ORTHO04x5M007414 6.1e-60 233.0 129 87.6
Zm00007a00018395 Zea mays B104 HOM04x5M005494 ORTHO04x5M003247 6.1e-60 233.0 139 82.0
Zm00008a032154 Zea mays PH207 HOM04x5M005494 ORTHO04x5M007414 6.1e-60 233.0 129 87.6
TraesCS3B02G258700 Triticum aestivum HOM04x5M005494 ORTHO04x5M007414 8.0e-60 232.6 129 88.4
Misin06G211500 Miscanthus sinensis HOM04x5M005494 ORTHO04x5M007414 1.4e-59 231.9 129 88.4
TRITD3Bv1G134610 Triticum turgidum HOM04x5M005494 ORTHO04x5M007414 1.4e-59 231.9 129 88.4
MisinT208100 Miscanthus sinensis HOM04x5M005494 ORTHO04x5M007414 1.8e-59 231.5 129 87.6
Bradi2g44760 Brachypodium distachyon HOM04x5M005494 ORTHO04x5M007414 6.8e-59 229.6 129 85.3
LP024116 Lolium perenne HOM04x5M005494 ORTHO04x5M007414 1.1e-56 222.2 129 85.3
Pgl_GLEAN_10022167 Cenchrus americanus HOM04x5M005494 ORTHO04x5M007414 1.9e-53 211.5 158 70.3
ATR1091G073 Amborella trichopoda HOM04x5M005494 ORTHO04x5M007414 7.3e-53 209.5 129 76.0
p5.00_sc00008_p0267 Elaeis guineensis HOM04x5M005494 ORTHO04x5M007414 9.5e-53 209.1 129 77.5
evm.TU.AsparagusV1_05.1339.V1.1 Asparagus officinalis HOM04x5M005494 ORTHO04x5M007414 1.6e-52 208.4 129 78.3
Aco005384 Ananas comosus HOM04x5M005494 ORTHO04x5M007414 2.8e-52 207.6 129 76.7
Ma04_g24520 Musa acuminata HOM04x5M005494 ORTHO04x5M007414 3.6e-52 207.2 129 76.7
Oropetium_20150105_11834 Oropetium thomaeum HOM04x5M005494 ORTHO04x5M007414 1.0e-51 205.7 112 89.3
PEQU_15781 Phalaenopsis equestris HOM04x5M005494 ORTHO04x5M007414 1.0e-51 205.7 129 75.2
Sspon.03G0010470-4D Saccharum spontaneum HOM04x5M005494 ORTHO04x5M007414 4.4e-50 200.3 109 89.0
Potri.001G346700 Populus trichocarpa HOM04x5M005494 ORTHO04x5M007414 9.8e-50 199.1 129 73.6
GSVIVG01032450001 Vitis vinifera HOM04x5M005494 ORTHO04x5M007414 9.8e-50 199.1 129 72.1
Zosma67g00400 Zostera marina HOM04x5M005494 ORTHO04x5M007414 1.4e-48 195.3 125 70.4
AT5G14660 Arabidopsis thaliana HOM04x5M005494 ORTHO04x5M007414 7.0e-48 193.0 129 69.8
Spipo18G0023100 Spirodela polyrhiza HOM04x5M005494 ORTHO04x5M007414 9.2e-48 192.6 129 71.3
ASH_gene9750 Apostasia shenzhenica HOM04x5M005494 ORTHO04x5M007414 2.0e-47 191.4 142 67.6
Solyc02g086680.2 Solanum lycopersicum HOM04x5M005494 ORTHO04x5M007414 1.0e-46 189.1 128 68.0
CALSI_Maker00032789 Calamus simplicifolius HOM04x5M005494 ORTHO04x5M007414 4.3e-45 183.7 118 74.6
Mapoly0058s0077 Marchantia polymorpha HOM04x5M005494 ORTHO04x5M007414 2.4e-40 167.9 128 59.4
Pp3c24_20 Physcomitrium patens HOM04x5M005494 ORTHO04x5M007414 5.6e-37 156.8 139 54.0
MCO01G286 Micromonas commoda HOM04x5M005494 ORTHO04x5M007414 6.2e-36 153.3 125 56.0
gene7321 Selaginella moellendorffii HOM04x5M005494 ORTHO04x5M007414 1.3e-33 145.6 128 51.6
Cre01.g039750 Chlamydomonas reinhardtii HOM04x5M005494 ORTHO04x5M007414 2.3e-30 134.8 129 52.7
p5.00_sc00167_p0022 Elaeis guineensis HOM04x5M005494 ORTHO04x5M007414 3.9e-30 134.0 129 54.3
Cre01.g039650 Chlamydomonas reinhardtii HOM04x5M005494 ORTHO04x5M007414 1.1e-27 125.9 132 49.2
PEQU_40007 Phalaenopsis equestris HOM04x5M005494 ORTHO04x5M007414 7.6e-26 119.8 71 80.3
gene7292 Selaginella moellendorffii HOM04x5M005494 ORTHO04x5M007414 3.2e-24 114.4 140 45.7
Sobic.002G396200 Sorghum bicolor HOM04x5M006181 ORTHO04x5M007276 6.4e-17 90.1 130 39.2
Oropetium_20150105_25076 Oropetium thomaeum HOM04x5M006181 ORTHO04x5M007276 2.4e-16 88.2 130 37.7
Seita.5G195300 Setaria italica HOM04x5M006181 ORTHO04x5M007276 2.4e-16 88.2 130 39.2
Zjn_sc00104.1.g00870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006181 ORTHO04x5M007276 2.4e-16 88.2 130 36.9
Bradi2g41027 Brachypodium distachyon HOM04x5M006181 ORTHO04x5M007276 5.4e-16 87.0 130 36.9
Zm00008a029511 Zea mays PH207 HOM04x5M006181 ORTHO04x5M007276 5.4e-16 87.0 130 36.2
Pgl_GLEAN_10036950 Cenchrus americanus HOM04x5M006181 ORTHO04x5M007276 7.1e-16 86.7 116 40.5
Pp3s46_10 Physcomitrium patens HOM04x5M006230 ORTHO04x5M008096 7.1e-16 86.7 114 41.2
OB01G29090 Oryza brachyantha HOM04x5M006181 ORTHO04x5M007276 2.1e-15 85.1 130 37.7
LP029947 Lolium perenne HOM04x5M006181 ORTHO04x5M007276 2.7e-15 84.7 130 37.7
HORVU3Hr1G047870 Hordeum vulgare HOM04x5M006181 ORTHO04x5M007276 3.5e-15 84.3 130 36.9
TraesCS3D02G205000 Triticum aestivum HOM04x5M006181 ORTHO04x5M007276 6.0e-15 83.6 130 36.9
TraesCS3B02G234300 Triticum aestivum HOM04x5M006181 ORTHO04x5M007276 7.8e-15 83.2 130 36.9
TRITD3Bv1G116770 Triticum turgidum HOM04x5M006181 ORTHO04x5M007276 7.8e-15 83.2 130 36.9
LOC_Os01g37510 Oryza sativa ssp. japonica HOM04x5M006181 ORTHO04x5M007276 1.0e-14 82.8 130 36.9
OsR498G0101312600.01 Oryza sativa ssp. indica HOM04x5M006181 ORTHO04x5M007276 1.0e-14 82.8 130 36.9
Zm00007a00050728 Zea mays B104 HOM04x5M006181 ORTHO04x5M007276 1.3e-14 82.4 136 34.6
TraesCS3A02G204000 Triticum aestivum HOM04x5M006181 ORTHO04x5M007276 2.3e-14 81.6 130 36.2
TRITD3Av1G127660 Triticum turgidum HOM04x5M006181 ORTHO04x5M007276 2.3e-14 81.6 130 36.2
Spipo14G0000600 Spirodela polyrhiza HOM04x5M006181 ORTHO04x5M007276 3.9e-14 80.9 130 34.6
Solyc07g015860.2 Solanum lycopersicum HOM04x5M006181 ORTHO04x5M007276 5.1e-14 80.5 131 33.6
PEQU_31243 Phalaenopsis equestris HOM04x5M006181 ORTHO04x5M007276 1.5e-13 79.0 130 33.8
AT1G15390 Arabidopsis thaliana HOM04x5M006181 ORTHO04x5M007276 1.9e-13 78.6 130 35.4
p5.00_sc00105_p0080 Elaeis guineensis HOM04x5M006181 ORTHO04x5M007276 1.9e-13 78.6 130 35.4
Potri.001G171800 Populus trichocarpa HOM04x5M006181 ORTHO04x5M007276 2.5e-13 78.2 130 36.2
Aco022290 Ananas comosus HOM04x5M006181 ORTHO04x5M007276 3.3e-13 77.8 130 34.6
Ma04_g25130 Musa acuminata HOM04x5M006181 ORTHO04x5M007276 3.3e-13 77.8 130 36.2
ASH_gene13549 Apostasia shenzhenica HOM04x5M006181 ORTHO04x5M007276 4.3e-13 77.4 130 33.8
gene19700 Selaginella moellendorffii HOM04x5M005494 ORTHO04x5M007414 9.6e-13 76.3 71 56.3
Pp3c2_27110 Physcomitrium patens HOM04x5M006181 ORTHO04x5M007276 2.1e-12 75.1 131 34.4
ATR1156G012 Amborella trichopoda HOM04x5M006181 ORTHO04x5M007276 4.8e-12 73.9 130 32.3
CALSI_Maker00029113 Calamus simplicifolius HOM04x5M006181 ORTHO04x5M007276 4.8e-12 73.9 131 34.4
GSVIVG01017280001 Vitis vinifera HOM04x5M006181 ORTHO04x5M007276 4.8e-12 73.9 130 33.1
Cre03.g172100 Chlamydomonas reinhardtii HOM04x5M006181 ORTHO04x5M007276 8.1e-12 73.2 136 33.8
gene15087 Selaginella moellendorffii HOM04x5M006181 ORTHO04x5M007276 8.1e-12 73.2 129 31.8
Zosma154g00140 Zostera marina HOM04x5M006181 ORTHO04x5M007276 1.4e-11 72.4 130 32.3
Pp3c1_9250 Physcomitrium patens HOM04x5M006181 ORTHO04x5M007276 4.0e-11 70.9 131 33.6
evm.TU.AsparagusV1_08.745.V1.1 Asparagus officinalis HOM04x5M006181 ORTHO04x5M007276 5.3e-11 70.5 129 28.7
CALSI_Maker00037405 Calamus simplicifolius HOM04x5M006181 ORTHO04x5M007276 1.2e-10 69.3 126 33.3
Mapoly0285s0003 Marchantia polymorpha HOM04x5M006181 ORTHO04x5M007276 4.5e-10 67.4 131 32.1
Mapoly0061s0037 Marchantia polymorpha HOM04x5M006181 ORTHO04x5M007276 4.5e-10 67.4 131 32.1
gene25762 Selaginella moellendorffii HOM04x5M006181 ORTHO04x5M007276 7.6e-10 66.6 147 29.3
gene13937 Selaginella moellendorffii HOM04x5M006181 ORTHO04x5M007276 2.2e-09 65.1 105 37.1
gene30671 Selaginella moellendorffii HOM04x5M006181 ORTHO04x5M007276 2.9e-09 64.7 105 37.1
PH01001166G0090 Phyllostachys edulis HOM04x5M006181 ORTHO04x5M007276 2.1e-07 58.5 140 28.6
MCO13G487 Micromonas commoda HOM04x5M006181 ORTHO04x5M007276 1.8e-06 55.5 130 28.5
PAB00040195 Picea abies HOM04x5M006181 ORTHO04x5M007276 8.7e-06 53.1 78 33.3

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (4 genes)
Picea abies (1 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (7 genes)
Setaria italica (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (2 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings