Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 3.1e-246 853.6 519 100.0
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.5e-182 641.3 553 75.6
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.9e-179 631.7 583 72.7
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 3.7e-178 627.5 579 71.8
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-177 625.9 578 72.5
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 6.9e-177 623.2 577 72.1
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 3.6e-173 610.9 584 70.0
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 6.1e-173 610.1 584 71.4
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 4.1e-169 597.4 548 73.7
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 7.7e-168 593.2 418 76.1
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 3.8e-167 590.9 433 73.9
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 4.1e-161 570.9 578 70.4
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 4.2e-150 534.3 466 65.9
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.3e-143 512.7 579 66.7
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.1e-142 509.6 579 66.5
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.1e-142 509.6 579 66.5
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.4e-140 502.7 579 65.3
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 9.5e-118 426.8 404 62.4
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 3.6e-117 424.9 410 60.7
Zm00001d024833 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 1.7e-98 362.8 335 80.3
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 2.5e-94 349.0 456 47.4
Solyc03g118390.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 7.1e-81 304.3 442 43.2
Sspon.07G0013220-3D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.2e-80 303.5 335 73.4
Aco007293 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 5.1e-79 298.1 439 44.0
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 2.9e-74 282.3 282 62.1
Ma02_g03510 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 4.6e-72 275.0 221 62.0
Zosma69g00810 Zostera marina HOM04x5M001523 ORTHO04x5M001589 2.6e-67 259.2 426 39.0
Seita.8G134100 Setaria italica HOM04x5M001523 ORTHO04x5M001589 2.9e-66 255.8 433 38.1
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 3.8e-66 255.4 357 40.6
GSVIVG01004935001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.4e-65 253.4 461 39.7
Potri.005G044600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.2e-64 250.4 225 57.3
TraesCS4A02G192600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.2e-64 250.4 433 39.5
ATR0706G100 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 2.7e-64 249.2 224 57.1
Zm00007a00011305 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.7e-64 249.2 423 36.6
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 4.6e-64 248.4 442 39.4
LOC_Os11g31950 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 7.9e-64 247.7 424 38.4
TraesCS4D02G120700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.0e-63 247.3 433 39.3
TraesCS4B02G122700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.0e-63 247.3 437 39.6
Bradi4g17917 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 1.3e-63 246.9 438 38.4
Misin10G109400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.3e-63 246.9 434 37.1
TRITD4Av1G154160 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.3e-63 246.9 416 39.7
ATR0582G200 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 1.8e-63 246.5 226 58.4
HORVU4Hr1G023390 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 1.8e-63 246.5 416 39.4
Misin09G134700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.8e-63 246.5 437 37.8
p5.00_sc01766_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 3.0e-63 245.7 240 56.2
Sobic.005G129400 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 5.1e-63 245.0 437 35.9
Ma09_g01020 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 6.7e-63 244.6 444 39.2
LP038183 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 1.1e-62 243.8 410 40.5
TRITD4Bv1G050480 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.1e-62 243.8 420 39.8
Oropetium_20150105_21536 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 1.5e-62 243.4 470 37.0
Aco027227 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.9e-62 243.0 416 39.2
OB11G21770 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 2.5e-62 242.7 427 38.4
Zm00001d049273 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 3.3e-62 242.3 437 35.2
Ma04_g00060 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 5.7e-62 241.5 209 61.2
Aco015077 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.6e-61 240.0 235 54.5
Zosma27g00300 Zostera marina HOM04x5M001523 ORTHO04x5M001589 2.8e-61 239.2 229 55.0
LP009590 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 3.7e-61 238.8 225 55.1
PEQU_08641 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 3.7e-61 238.8 228 55.3
GSVIVG01008631001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 8.2e-61 237.7 256 53.1
Oropetium_20150105_09846 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 1.8e-60 236.5 216 56.9
Potri.015G104600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.8e-60 236.5 266 50.8
Bradi2g59510 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 2.4e-60 236.1 226 54.9
gene4642 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 2.4e-60 236.1 236 53.8
Potri.001G065800 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 4.1e-60 235.3 274 49.3
p5.00_sc00057_p0063 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 5.3e-60 235.0 226 54.9
gene16812 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 5.3e-60 235.0 236 53.4
PEQU_07858 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 6.9e-60 234.6 224 54.9
OB01G51640 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 3.4e-59 232.3 230 53.9
LOC_Os01g70320 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 3.4e-59 232.3 229 53.7
Potri.012G105400 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 5.9e-59 231.5 265 48.3
AT4G08630 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.3e-58 230.3 406 37.7
Potri.003G164100 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.9e-58 229.2 436 38.1
Aco006674 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 3.8e-58 228.8 257 50.2
Pp3c22_21290 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 3.8e-58 228.8 218 55.5
Pp3c22_21255 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 3.8e-58 228.8 218 55.5
Pp3c19_9680 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 5.0e-58 228.4 220 55.0
Sobic.003G412300 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 6.5e-58 228.0 227 52.4
HORVU3Hr1G096450 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 8.5e-58 227.6 227 53.7
TraesCS3D02G435000 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 8.5e-58 227.6 227 53.7
Misin05G403900 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.4e-57 226.9 227 52.0
TraesCS3B02G476100 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.9e-57 226.5 229 54.1
TraesCS3A02G442300 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.9e-57 226.5 232 53.4
TRITD3Av1G250250 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.9e-57 226.5 232 53.4
Misin06G371400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 3.2e-57 225.7 227 51.5
Spipo4G0061800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 3.2e-57 225.7 230 53.5
Sspon.06G0014630-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 5.5e-57 224.9 484 32.2
TRITD3Bv1G242080 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 5.5e-57 224.9 232 53.0
CALSI_Maker00048189 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 7.2e-57 224.6 220 55.5
Seita.5G438400 Setaria italica HOM04x5M001523 ORTHO04x5M001589 9.4e-57 224.2 227 52.4
Sspon.03G0027700-2C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.2e-56 223.8 226 53.5
AT4G25070 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 3.6e-56 222.2 226 50.9
ASH_gene19761 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 4.6e-56 221.9 438 37.9
Sspon.06G0014630-4D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 6.1e-56 221.5 398 36.7
Mapoly0101s0059 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 1.0e-55 220.7 205 54.6
AT3G48860 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.3e-55 219.5 269 48.3
Sspon.03G0027700-1P Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 3.9e-55 218.8 217 54.4
AT5G13260 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 5.1e-55 218.4 221 53.8
AT5G23700 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 8.8e-55 217.6 255 49.4
Sspon.06G0014630-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-54 217.2 406 36.0
CALSI_Maker00037144 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 3.3e-54 215.7 307 43.0
CALSI_Maker00018832 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 6.3e-53 211.5 504 34.7
Sspon.06G0014630-3C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.8e-52 209.9 389 36.0
Spipo7G0049800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 1.3e-50 203.8 231 50.6
GSVIVG01021962001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.3e-50 203.8 192 56.2
CALSI_Maker00016663 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 7.0e-44 181.4 257 43.6
Zjn_sc00009.1.g01850.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 7.7e-43 177.9 214 46.7
PH01000002G3240 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 2.2e-42 176.4 472 32.8
Zosma5g01040 Zostera marina HOM04x5M001523 ORTHO04x5M001589 4.2e-41 172.2 217 43.8
OsR498G0509736400.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 2.1e-40 169.9 114 74.6
Mapoly0013s0021 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 2.7e-40 169.5 202 43.6
OsR498G1120235900.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 2.2e-37 159.8 345 35.9
p5.00_sc00211_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 1.1e-36 157.5 119 64.7
Zm00007a00002495 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 7.0e-36 154.8 163 52.1
Zm00008a012853 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 7.0e-36 154.8 163 52.1
Pgl_GLEAN_10000952 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 5.9e-35 151.8 178 46.6
PAB00042674 Picea abies HOM04x5M001523 ORTHO04x5M001589 2.5e-33 146.4 163 52.8
Solyc10g037930.1 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 4.7e-32 142.1 130 58.5
Zjn_sc00034.1.g02320.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.4e-28 130.6 190 43.7
evm.TU.AsparagusV1_04.1549.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 2.9e-26 122.9 137 51.1
PEQU_04259 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 3.8e-26 122.5 106 60.4
evm.TU.AsparagusV1_09.1475.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 3.2e-25 119.4 111 55.0
Zm00001d042262 Zea mays B73 HOM04x5M000360 ORTHO04x5M000256 1.6e-24 117.1 303 29.4
Zjn_sc00186.1.g00130.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 8.0e-24 114.8 116 50.0
Pgl_GLEAN_10000785 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 6.8e-23 111.7 85 63.5
ASH_gene8570 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 2.2e-21 106.7 97 58.8
PH01000258G0390 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 2.4e-20 103.2 108 63.0
Solyc05g023770.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 6.6e-18 95.1 274 32.5
p5.00_sc00211_p0002 Elaeis guineensis HOM04x5M001523 ORTHO04x5M016727 1.2e-14 84.3 120 51.7
ASH_gene8571 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M016727 1.7e-13 80.5 118 50.8
PH01002160G0250 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.7e-13 80.5 58 62.1
evm.TU.AsparagusV1_Unassigned.393.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 2.2e-13 80.1 60 61.7
MCO12G428 Micromonas commoda HOM04x5M001523 ORTHO04x5M001589 1.4e-12 77.4 347 24.2
PAB00006093 Picea abies HOM04x5M001523 ORTHO04x5M001589 1.2e-11 74.3 57 57.9
Aco028088 Ananas comosus HOM04x5M000382 ORTHO04x5M000270 6.6e-10 68.6 83 43.4
Aco021763 Ananas comosus HOM04x5M001523 ORTHO04x5M009652 1.5e-09 67.4 58 53.4
CALSI_Maker00048187 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M016727 3.3e-09 66.2 101 45.5
PH01002160G0270 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.2e-08 64.3 104 39.4
Cre03.g161578 Chlamydomonas reinhardtii HOM04x5M001523 ORTHO04x5M001589 8.0e-08 61.6 295 23.4
PAB00048619 Picea abies HOM04x5M001523 ORTHO04x5M001589 2.3e-07 60.1 95 37.9
PH01083440G0010 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 8.9e-07 58.2 47 57.4

Amborella trichopoda (2 genes)
Ananas comosus (6 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (4 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (3 genes)