Interactive Phylogenetics Module

Gene Id
Oropetium_20150105_15433

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oropetium_20150105_27053 Oropetium thomaeum HOM04x5M006384 ORTHO04x5M004979 1.4e-84 315.5 236 100.0
Oropetium_20150105_15433 Oropetium thomaeum HOM04x5M006384 ORTHO04x5M004979 1.4e-84 315.5 236 100.0
Seita.3G051200 Setaria italica HOM04x5M006384 ORTHO04x5M004979 3.2e-44 181.4 236 74.2
Pgl_GLEAN_10004865 Cenchrus americanus HOM04x5M006384 ORTHO04x5M004979 3.5e-43 177.9 230 75.2
Misin16G043800 Miscanthus sinensis HOM04x5M006384 ORTHO04x5M004979 2.3e-42 175.3 232 73.3
OsR498G0509671900.01 Oryza sativa ssp. indica HOM04x5M006384 ORTHO04x5M004979 2.3e-42 175.3 245 69.0
OB05G12170 Oryza brachyantha HOM04x5M006384 ORTHO04x5M004979 8.6e-42 173.3 244 71.3
Sspon.07G0014140-1A Saccharum spontaneum HOM04x5M006384 ORTHO04x5M004979 1.5e-41 172.6 233 72.5
Zm00001d010940 Zea mays B73 HOM04x5M006384 ORTHO04x5M004979 3.3e-41 171.4 237 71.3
Zm00007a00012321 Zea mays B104 HOM04x5M006384 ORTHO04x5M004979 3.3e-41 171.4 237 71.3
Zm00008a031781 Zea mays PH207 HOM04x5M006384 ORTHO04x5M004979 3.3e-41 171.4 237 71.3
Sspon.07G0014140-4D Saccharum spontaneum HOM04x5M006384 ORTHO04x5M004979 4.3e-41 171.0 233 72.5
Sspon.07G0014140-3C Saccharum spontaneum HOM04x5M006384 ORTHO04x5M004979 1.6e-40 169.1 226 73.5
LOC_Os05g04150 Oryza sativa ssp. japonica HOM04x5M006384 ORTHO04x5M004979 1.4e-39 166.0 245 67.8
Bradi2g38470 Brachypodium distachyon HOM04x5M006384 ORTHO04x5M004979 4.4e-38 161.0 225 71.6
Sobic.009G031200 Sorghum bicolor HOM04x5M006384 ORTHO04x5M004979 2.4e-36 155.2 228 71.9
LP039018 Lolium perenne HOM04x5M006384 ORTHO04x5M004979 9.2e-36 153.3 223 72.6
TraesCS1D02G077400 Triticum aestivum HOM04x5M006384 ORTHO04x5M004979 6.0e-35 150.6 227 70.0
TRITD1Bv1G035350 Triticum turgidum HOM04x5M006384 ORTHO04x5M004979 1.0e-34 149.8 227 70.0
TraesCS1A02G074800 Triticum aestivum HOM04x5M006384 ORTHO04x5M004979 2.3e-34 148.7 227 69.6
TRITD1Av1G026100 Triticum turgidum HOM04x5M006384 ORTHO04x5M004979 2.3e-34 148.7 227 69.6
TraesCS1B02G093400 Triticum aestivum HOM04x5M006384 ORTHO04x5M004979 8.6e-34 146.7 227 69.2
Zjn_sc00129.1.g00560.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006384 ORTHO04x5M004979 1.1e-33 146.4 224 68.3
Misin17G035400 Miscanthus sinensis HOM04x5M006384 ORTHO04x5M004979 1.5e-33 146.0 225 70.7
HORVU1Hr1G016170 Hordeum vulgare HOM04x5M006384 ORTHO04x5M004979 1.9e-33 145.6 225 69.3
Zm00007a00031833 Zea mays B104 HOM04x5M006384 ORTHO04x5M004979 4.0e-31 137.9 243 67.9
Zm00001d024722 Zea mays B73 HOM04x5M006384 ORTHO04x5M004979 3.4e-30 134.8 223 71.3
Zm00008a037400 Zea mays PH207 HOM04x5M006384 ORTHO04x5M004979 3.4e-30 134.8 223 71.3
Sspon.07G0014140-2B Saccharum spontaneum HOM04x5M006384 ORTHO04x5M004979 7.8e-27 123.6 193 74.1
Zjn_sc00016.1.g05120.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006384 ORTHO04x5M004979 4.0e-23 111.3 206 66.5
PH01000445G0940 Phyllostachys edulis HOM04x5M006384 ORTHO04x5M004979 9.0e-23 110.2 183 73.8
OB01G22280 Oryza brachyantha HOM04x5M006384 ORTHO04x5M004979 6.9e-15 84.0 245 55.9
LOC_Os01g19410 Oryza sativa ssp. japonica HOM04x5M006384 ORTHO04x5M004979 2.6e-14 82.0 241 56.0
OsR498G0100737600.01 Oryza sativa ssp. indica HOM04x5M006384 ORTHO04x5M004979 5.8e-14 80.9 241 56.0
CALSI_Maker00043194 Calamus simplicifolius HOM04x5M006384 ORTHO04x5M004979 9.9e-14 80.1 232 52.6
Ma02_g08960 Musa acuminata HOM04x5M006384 ORTHO04x5M004979 1.0e-10 70.1 66 51.5
Ma11_g04720 Musa acuminata HOM04x5M006384 ORTHO04x5M004979 2.3e-10 68.9 69 52.2
Sspon.03G0015600-2C Saccharum spontaneum HOM04x5M010415 ORTHO04x5M004979 2.3e-10 68.9 224 53.6
Zm00001d009131 Zea mays B73 HOM04x5M010415 ORTHO04x5M004979 2.3e-10 68.9 224 53.6
PH01005609G0060 Phyllostachys edulis HOM04x5M006384 ORTHO04x5M004979 3.9e-10 68.2 232 56.9
Sspon.03G0015600-1A Saccharum spontaneum HOM04x5M010415 ORTHO04x5M004979 3.9e-10 68.2 217 54.4
Seita.5G028300 Setaria italica HOM04x5M010415 ORTHO04x5M004979 7.4e-09 63.9 228 53.9
p5.00_sc00007_p0237 Elaeis guineensis HOM04x5M006384 ORTHO04x5M004979 9.6e-09 63.5 237 50.2
evm.TU.AsparagusV1_05.198.V1.1 Asparagus officinalis HOM04x5M006384 ORTHO04x5M004979 2.8e-08 62.0 61 45.9
Aco006370 Ananas comosus HOM04x5M006384 ORTHO04x5M004979 3.7e-08 61.6 71 46.5
p5.00_sc00033_p0216 Elaeis guineensis HOM04x5M006384 ORTHO04x5M004979 1.8e-07 59.3 232 50.4
Ma01_g17490 Musa acuminata HOM04x5M013494 ORTHO04x5M004979 9.0e-07 57.0 70 44.3
Zm00007a00014048 Zea mays B104 HOM04x5M006384 ORTHO04x5M004979 2.0e-06 55.8 116 89.7
Zosma127g00240 Zostera marina HOM04x5M006384 ORTHO04x5M004979 7.6e-06 53.9 71 36.6

Amborella trichopoda (0 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (0 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (2 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (0 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings