Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin03G324100 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 1.1e-220 768.8 513 100.0
MisinT311500 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 9.6e-212 739.2 532 94.9
Sspon.02G0005140-2B Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 4.7e-211 736.9 532 94.7
Sspon.02G0005140-1A Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 4.7e-211 736.9 532 94.7
Sobic.002G341100 Sorghum bicolor HOM04x5M006888 ORTHO04x5M008419 5.2e-210 733.4 532 94.4
Zm00001d006606 Zea mays B73 HOM04x5M006888 ORTHO04x5M000946 2.2e-192 674.9 534 88.6
Zm00007a00040219 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 1.1e-191 672.5 532 87.4
Zm00001d021810 Zea mays B73 HOM04x5M000354 ORTHO04x5M008419 3.1e-186 654.4 567 82.0
Zm00008a029109 Zea mays PH207 HOM04x5M006888 ORTHO04x5M008419 3.1e-186 654.4 522 87.2
Seita.2G354700 Setaria italica HOM04x5M006888 ORTHO04x5M008419 5.1e-165 583.9 562 78.5
Zm00008a009570 Zea mays PH207 HOM04x5M006888 ORTHO04x5M008419 3.1e-162 574.7 498 85.5
Zm00007a00010553 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 5.4e-122 441.0 365 93.7
Pgl_GLEAN_10015811 Cenchrus americanus HOM04x5M000354 ORTHO04x5M002431 4.3e-119 431.4 529 70.5
OB07G24680 Oryza brachyantha HOM04x5M006888 ORTHO04x5M008419 6.8e-117 424.1 539 50.1
PH01003906G0090 Phyllostachys edulis HOM04x5M006888 ORTHO04x5M008419 7.8e-113 410.6 541 50.3
Bradi1g24580 Brachypodium distachyon HOM04x5M006888 ORTHO04x5M008419 1.4e-101 373.2 456 50.9
Zjn_sc00001.1.g06600.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 1.1e-98 363.6 522 51.9
LP000741 Lolium perenne HOM04x5M006888 ORTHO04x5M008419 6.0e-97 357.8 441 51.5
PH01000363G0270 Phyllostachys edulis HOM04x5M006888 ORTHO04x5M002431 4.0e-93 345.1 503 46.7
TraesCS2B02G229800 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 5.3e-85 318.2 463 50.8
TRITD2Bv1G083420 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 5.3e-85 318.2 463 50.8
TraesCS2A02G202700 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 5.8e-84 314.7 439 52.2
TRITD2Av1G074100 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 5.8e-84 314.7 439 52.2
TraesCS2D02G213000 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 2.9e-83 312.4 439 51.9
LOC_Os07g37800 Oryza sativa ssp. japonica HOM04x5M006888 ORTHO04x5M008419 4.5e-76 288.5 537 40.4
Zm00001d031299 Zea mays B73 HOM04x5M006888 ORTHO04x5M008419 8.8e-56 221.1 174 71.3
Zm00001d018373 Zea mays B73 HOM04x5M006888 ORTHO04x5M008419 8.8e-56 221.1 174 71.3
Zm00007a00051158 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 8.8e-56 221.1 174 71.3
Zm00007a00047365 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 8.8e-56 221.1 174 71.3
Zm00008a026038 Zea mays PH207 HOM04x5M000606 ORTHO04x5M000852 3.3e-55 219.2 178 70.2
p5.00_sc00154_p0058 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 3.4e-52 209.1 537 33.5
Oropetium_20150105_16539 Oropetium thomaeum HOM04x5M006888 ORTHO04x5M008419 1.2e-41 174.1 224 48.7
Aco009146 Ananas comosus HOM04x5M006888 ORTHO04x5M008419 2.8e-38 162.9 568 30.5
HORVU2Hr1G039990 Hordeum vulgare HOM04x5M006888 ORTHO04x5M008419 2.9e-35 152.9 238 51.3
CALSI_Maker00044427 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 3.8e-35 152.5 545 29.7
Potri.004G036900 Populus trichocarpa HOM04x5M006888 ORTHO04x5M008419 2.7e-33 146.4 529 27.6
Zm00008a024306 Zea mays PH207 HOM04x5M000032 ORTHO04x5M008419 1.4e-32 144.1 96 79.2
AT1G61215 Arabidopsis thaliana HOM04x5M006888 ORTHO04x5M008419 5.2e-32 142.1 533 27.4
CALSI_Maker00019150 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 8.8e-32 141.4 408 33.3
Zm00001d038498 Zea mays B73 HOM04x5M006888 ORTHO04x5M008419 2.7e-28 129.8 113 67.3
evm.TU.AsparagusV1_03.2223.V1.1 Asparagus officinalis HOM04x5M006888 ORTHO04x5M008419 7.7e-28 128.3 460 30.7
OsR498G0714588000.01 Oryza sativa ssp. indica HOM04x5M006888 ORTHO04x5M008419 7.7e-28 128.3 366 32.5
ATR0693G270 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 1.6e-25 120.6 528 26.5
Spipo14G0058400 Spirodela polyrhiza HOM04x5M006888 ORTHO04x5M008419 2.6e-23 113.2 435 26.4
Solyc10g009160.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 2.8e-22 109.8 456 27.2
Solyc02g078810.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 1.3e-19 100.9 447 26.4
Zjn_sc00008.1.g10910.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 4.7e-17 92.4 53 84.9
Zm00007a00037760 Zea mays B104 HOM04x5M003042 ORTHO04x5M008419 5.2e-16 89.0 62 75.8
p5.00_sc00259_p0022 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 3.4e-15 86.3 458 25.3
p5.00_sc00259_p0021 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 2.7e-12 76.6 361 26.3
PAB00018157 Picea abies HOM04x5M002570 ORTHO04x5M002687 2.7e-12 76.6 101 44.6
Sspon.02G0037080-1B Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 1.3e-11 74.3 109 40.4
Bradi3g40060 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 2.9e-11 73.2 110 40.9
Sspon.02G0037080-2C Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 5.0e-11 72.4 124 36.3
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 2.5e-10 70.1 116 36.2
Bradi4g33820 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 1.6e-09 67.4 174 31.6
p5.00_sc00096_p0028 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.6e-09 67.4 109 37.6
LOC_Os08g39980 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 1.6e-09 67.4 122 36.1
OsR498G0816445800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 1.6e-09 67.4 122 36.1
Seita.2G254700 Setaria italica HOM04x5M002570 ORTHO04x5M002687 1.6e-09 67.4 148 33.1
PAB00022580 Picea abies HOM04x5M002570 ORTHO04x5M002687 2.8e-09 66.6 204 30.4
PAB00062047 Picea abies HOM04x5M002570 ORTHO04x5M002687 2.8e-09 66.6 204 30.4
Sobic.002G248600 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 2.8e-09 66.6 144 34.7
Sspon.02G0037080-3D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 3.6e-09 66.2 146 34.2
MisinT266000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 4.7e-09 65.9 145 34.5
Seita.6G206100 Setaria italica HOM04x5M002570 ORTHO04x5M002687 4.7e-09 65.9 121 36.4
gene2213 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 8.0e-09 65.1 105 39.0
p5.00_sc00020_p0160 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.0e-08 64.7 202 31.2
Misin04G229900 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 1.0e-08 64.7 149 32.9
Zjn_sc00695.1.g00010.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 1.0e-08 64.7 37 86.5
Ma08_g26310 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 1.4e-08 64.3 113 34.5
p5.00_sc00037_p0129 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 2.3e-08 63.5 107 37.4
OB09G21390 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 2.3e-08 63.5 122 32.8
TraesCS7A02G247200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 2.3e-08 63.5 161 32.3
TraesCS7B02G144300 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 3.1e-08 63.2 161 32.9
TraesCS7D02G245800 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 3.1e-08 63.2 161 32.9
TraesCS5B02G266200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 4.0e-08 62.8 179 31.8
TRITD5Bv1G149570 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 4.0e-08 62.8 179 31.8
Zm00001d020947 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 5.2e-08 62.4 185 29.2
Zm00007a00035265 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 5.2e-08 62.4 185 29.2
Zm00008a028437 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 5.2e-08 62.4 185 29.2
HORVU7Hr1G050770 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 6.8e-08 62.0 162 32.7
Oropetium_20150105_05500 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 6.8e-08 62.0 105 36.2
AT2G42150 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 8.9e-08 61.6 107 33.6
Potri.003G212500 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 8.9e-08 61.6 99 38.4
gene5260 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 1.2e-07 61.2 128 30.5
Zm00001d031454 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 1.5e-07 60.8 109 36.7
Zm00007a00022852 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 1.5e-07 60.8 109 36.7
CALSI_Maker00032927 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 2.0e-07 60.5 111 34.2
Solyc01g006470.1 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 2.6e-07 60.1 89 34.8
CALSI_Maker00038910 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 3.4e-07 59.7 101 34.7
LOC_Os09g31454 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 3.4e-07 59.7 161 31.1
OsR498G0917730800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 3.4e-07 59.7 161 31.1
Sobic.007G209500 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 3.4e-07 59.7 112 34.8
p5.00_sc00131_p0015 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 5.8e-07 58.9 133 31.6
Misin07G233600 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 5.8e-07 58.9 123 34.1
Misin13G182000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 5.8e-07 58.9 120 34.2
HORVU5Hr1G073540 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 7.5e-07 58.5 172 30.2
HORVU5Hr1G073580 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 7.5e-07 58.5 172 30.2
Pp3c17_1160 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 7.5e-07 58.5 175 34.3
Pp3c17_1175 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 7.5e-07 58.5 175 34.3
Potri.001G013600 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 7.5e-07 58.5 95 33.7
TraesCS5D02G274400 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 7.5e-07 58.5 180 30.6
LP013034 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 1.3e-06 57.8 158 30.4
TraesCS5A02G266600 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 1.3e-06 57.8 182 30.2
PH01000594G0730 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 1.7e-06 57.4 129 31.0
PH01000150G0150 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 1.7e-06 57.4 118 30.5
Ma09_g12020 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 2.2e-06 57.0 461 33.0
ATR0605G388 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 3.7e-06 56.2 120 31.7
Pgl_GLEAN_10009993 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 4.9e-06 55.8 100 37.0
Sspon.06G0001740-1A Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 4.9e-06 55.8 120 32.5
Sspon.06G0001740-2D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 4.9e-06 55.8 120 32.5
GSVIVG01001371001 Vitis vinifera HOM04x5M002570 ORTHO04x5M002687 4.9e-06 55.8 114 33.3
LP030104 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 6.4e-06 55.5 123 31.7
Spipo0G0079200 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 6.4e-06 55.5 169 33.1

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (7 genes)
Hordeum vulgare (4 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (3 genes)
Vitis vinifera (1 genes)
Zea mays B73 (7 genes)
Zea mays B104 (7 genes)
Zea mays PH207 (5 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (4 genes)