Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin02G040400 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 2.3e-161 571.2 375 100.0
Misin01G055600 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 1.8e-142 508.4 375 88.0
Zm00001d034380 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 3.6e-127 457.6 380 83.2
Seita.9G062200 Setaria italica HOM04x5M007573 ORTHO04x5M009717 8.1e-127 456.4 374 77.5
Sobic.001G063100 Sorghum bicolor HOM04x5M007573 ORTHO04x5M009717 2.1e-119 431.8 327 91.4
Zm00001d013100 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 3.6e-111 404.4 325 80.0
Zm00007a00047457 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 3.6e-111 404.4 336 78.0
Zm00008a019244 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 3.6e-111 404.4 336 78.0
Sspon.01G0029910-2D Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 1.1e-107 392.9 336 83.0
Sspon.01G0029910-1A Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 4.6e-106 387.5 336 82.7
Zm00007a00016215 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 3.4e-101 371.3 341 79.8
TraesCS5B02G429000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 6.5e-92 340.5 333 66.1
TRITD5Bv1G212160 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 8.5e-92 340.1 333 66.1
HORVU5Hr1G103790 Hordeum vulgare HOM04x5M007573 ORTHO04x5M009717 5.1e-89 330.9 335 65.1
Bradi1g06250 Brachypodium distachyon HOM04x5M007573 ORTHO04x5M009717 2.2e-84 315.5 331 66.2
Zm00008a005426 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 2.9e-84 315.1 222 86.9
LOC_Os03g57530 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 3.2e-83 311.6 380 55.0
OsR498G0307179400.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 3.2e-83 311.6 380 55.0
TraesCS5A02G427100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.2e-82 309.7 333 59.8
TraesCS5D02G435000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.6e-82 309.3 333 61.6
TRITD5Av1G215750 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 3.6e-82 308.1 333 59.5
PH01000458G0270 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 4.6e-82 307.8 328 61.9
Zjn_sc00014.1.g06900.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 1.4e-81 306.2 343 63.0
LP029224 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 1.1e-72 276.6 337 58.5
Pgl_GLEAN_10033819 Cenchrus americanus HOM04x5M007573 ORTHO04x5M009717 1.5e-72 276.2 233 79.8
Zjn_sc00013.1.g06640.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 1.3e-60 236.5 244 62.7
OB03G43760 Oryza brachyantha HOM04x5M007573 ORTHO04x5M009717 1.9e-59 232.6 284 57.0
LP037141 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 2.9e-52 208.8 328 46.3
TraesCS2A02G248000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 4.4e-40 168.3 342 42.7
TraesCS5B02G259000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 4.3e-35 151.8 342 41.8
OsR498G0713568600.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 1.2e-34 150.2 263 46.0
TraesCS5D02G268100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 2.3e-33 146.0 280 47.9
PH01249411G0010 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 1.0e-28 130.6 140 60.0
Seita.8G028900 Setaria italica HOM04x5M007573 ORTHO04x5M009717 3.4e-24 115.5 292 42.8
evm.TU.AsparagusV1_03.437.V1.1 Asparagus officinalis HOM04x5M001892 ORTHO04x5M002029 2.2e-23 112.8 372 32.5
p5.00_sc02709_p0001 Elaeis guineensis HOM04x5M001892 ORTHO04x5M002029 1.6e-21 106.7 421 29.9
Ma04_g29270 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 2.1e-21 106.3 419 30.1
CALSI_Maker00009579 Calamus simplicifolius HOM04x5M001892 ORTHO04x5M002029 5.1e-20 101.7 423 28.8
LOC_Os07g06810 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 3.3e-19 99.0 218 40.8
ASH_gene16335 Apostasia shenzhenica HOM04x5M001892 ORTHO04x5M002029 1.8e-17 93.2 380 29.2
Zjn_sc00051.1.g01820.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002876 ORTHO04x5M003544 1.8e-17 93.2 230 37.0
Ma03_g15890 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 4.0e-17 92.0 392 28.8
GSVIVG01022511001 Vitis vinifera HOM04x5M001892 ORTHO04x5M002029 6.8e-17 91.3 339 27.7
Aco008758 Ananas comosus HOM04x5M001892 ORTHO04x5M002029 1.5e-16 90.1 331 33.2
Ma08_g27410 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 2.6e-16 89.4 387 28.9
Potri.016G065200 Populus trichocarpa HOM04x5M001892 ORTHO04x5M002029 2.6e-16 89.4 454 26.4
Solyc11g045480.1 Solanum lycopersicum HOM04x5M001892 ORTHO04x5M002029 1.3e-15 87.0 123 38.2
Ma08_g04570 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 7.1e-14 81.3 353 31.7
Aco005147 Ananas comosus HOM04x5M001892 ORTHO04x5M002029 1.2e-13 80.5 147 36.1
ASH_gene10223 Apostasia shenzhenica HOM04x5M001892 ORTHO04x5M002029 1.6e-13 80.1 329 31.9
CALSI_Maker00034293 Calamus simplicifolius HOM04x5M001892 ORTHO04x5M002029 1.6e-13 80.1 110 38.2
Zosma39g00700 Zostera marina HOM04x5M001892 ORTHO04x5M002029 1.6e-13 80.1 386 26.4
AT3G54740 Arabidopsis thaliana HOM04x5M001892 ORTHO04x5M002029 2.1e-13 79.7 380 26.3
evm.TU.AsparagusV1_01.3380.V1.1 Asparagus officinalis HOM04x5M001892 ORTHO04x5M002029 6.0e-13 78.2 122 39.3
TRITD2Av1G133040 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 1.3e-12 77.0 104 51.0
AT5G06560 Arabidopsis thaliana HOM04x5M001892 ORTHO04x5M002029 3.0e-12 75.9 124 33.1
PEQU_13390 Phalaenopsis equestris HOM04x5M001892 ORTHO04x5M002029 5.1e-12 75.1 350 29.7
Potri.006G199000 Populus trichocarpa HOM04x5M001892 ORTHO04x5M002029 5.1e-12 75.1 451 23.7
Pgl_GLEAN_10011558 Cenchrus americanus HOM04x5M001892 ORTHO04x5M002029 1.5e-11 73.6 157 33.8
Sspon.01G0024340-3C Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 1.5e-11 73.6 157 33.1
Sspon.01G0024340-1A Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 1.9e-11 73.2 157 33.1
Zm00001d013658 Zea mays B73 HOM04x5M001892 ORTHO04x5M002029 1.9e-11 73.2 157 32.5
Sobic.001G151900 Sorghum bicolor HOM04x5M001892 ORTHO04x5M002029 2.5e-11 72.8 157 33.1
Sspon.01G0024340-2B Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 3.3e-11 72.4 157 32.5
p5.00_sc00170_p0040 Elaeis guineensis HOM04x5M001892 ORTHO04x5M002029 4.3e-11 72.0 419 26.0
Ma01_g07720 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 4.3e-11 72.0 389 27.0
Zm00001d033504 Zea mays B73 HOM04x5M001892 ORTHO04x5M002029 4.3e-11 72.0 153 34.0
Zm00007a00002583 Zea mays B104 HOM04x5M001892 ORTHO04x5M002029 4.3e-11 72.0 153 34.0
Misin01G148300 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 5.6e-11 71.6 157 32.5
Zm00007a00027739 Zea mays B104 HOM04x5M001892 ORTHO04x5M002029 7.3e-11 71.2 157 31.2
Zm00008a019730 Zea mays PH207 HOM04x5M001892 ORTHO04x5M002029 7.3e-11 71.2 157 31.2
CALSI_Maker00029459 Calamus simplicifolius HOM04x5M001892 ORTHO04x5M002029 1.6e-10 70.1 343 28.3
Zm00008a004810 Zea mays PH207 HOM04x5M001892 ORTHO04x5M002029 1.6e-10 70.1 153 33.3
Misin02G114300 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 2.1e-10 69.7 157 31.2
PH01000005G0580 Phyllostachys edulis HOM04x5M001892 ORTHO04x5M002029 2.1e-10 69.7 119 37.0
ASH_gene3350 Apostasia shenzhenica HOM04x5M001892 ORTHO04x5M002029 2.8e-10 69.3 388 27.8
Bradi4g15750 Brachypodium distachyon HOM04x5M001892 ORTHO04x5M002029 2.8e-10 69.3 390 27.7
Misin09G161400 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 2.8e-10 69.3 119 37.0
Aco021022 Ananas comosus HOM04x5M001892 ORTHO04x5M002029 3.6e-10 68.9 439 26.0
HORVU4Hr1G041430 Hordeum vulgare HOM04x5M001892 ORTHO04x5M002029 4.7e-10 68.6 120 36.7
Zm00001d007503 Zea mays B73 HOM04x5M001892 ORTHO04x5M002029 6.2e-10 68.2 119 37.8
Zm00007a00024927 Zea mays B104 HOM04x5M001892 ORTHO04x5M002029 6.2e-10 68.2 119 37.8
evm.TU.AsparagusV1_05.1641.V1.1 Asparagus officinalis HOM04x5M001892 ORTHO04x5M002029 8.1e-10 67.8 109 40.4
LOC_Os03g44800 Oryza sativa ssp. japonica HOM04x5M001892 ORTHO04x5M002029 1.1e-09 67.4 158 31.6
OsR498G0306680500.01 Oryza sativa ssp. indica HOM04x5M001892 ORTHO04x5M002029 1.1e-09 67.4 158 31.6
OB11G23430 Oryza brachyantha HOM04x5M001892 ORTHO04x5M002029 1.4e-09 67.0 118 35.6
LOC_Os11g36740 Oryza sativa ssp. japonica HOM04x5M001892 ORTHO04x5M002029 1.4e-09 67.0 119 37.0
OsR498G1120396500.01 Oryza sativa ssp. indica HOM04x5M001892 ORTHO04x5M002029 1.4e-09 67.0 119 37.0
Misin10G137400 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 1.8e-09 66.6 120 36.7
Pgl_GLEAN_10029928 Cenchrus americanus HOM04x5M001892 ORTHO04x5M002029 2.4e-09 66.2 140 34.3
Solyc10g081620.1 Solanum lycopersicum HOM04x5M001892 ORTHO04x5M002029 3.1e-09 65.9 446 23.5
Sspon.06G0015780-1A Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 3.1e-09 65.9 119 36.1
Seita.9G153600 Setaria italica HOM04x5M001892 ORTHO04x5M002029 4.0e-09 65.5 157 31.2
HORVU0Hr1G000300 Hordeum vulgare HOM04x5M001892 ORTHO04x5M002029 9.0e-09 64.3 134 34.3
Seita.8G158800 Setaria italica HOM04x5M001892 ORTHO04x5M002029 9.0e-09 64.3 119 34.5
Sobic.008G098098 Sorghum bicolor HOM04x5M001892 ORTHO04x5M002029 1.2e-08 63.9 158 31.0
Seita.3G362500 Setaria italica HOM04x5M001892 ORTHO04x5M002029 1.2e-08 63.9 156 30.8
Ma02_g14640 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 350 26.3
TraesCS1D02G145300 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 134 34.3
TraesCS1A02G147200 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 134 34.3
TraesCS1B02G165300 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 134 34.3
TraesCS4A02G159000 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 337 26.4
TRITD1Av1G090630 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 134 34.3
TRITD1Bv1G094140 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 134 34.3
TRITD4Av1G106670 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 1.5e-08 63.5 337 26.4
Sobic.005G160900 Sorghum bicolor HOM04x5M001892 ORTHO04x5M002029 2.0e-08 63.2 119 35.3
LP005304 Lolium perenne HOM04x5M001892 ORTHO04x5M002029 4.4e-08 62.0 135 31.9
Spipo24G0030700 Spirodela polyrhiza HOM04x5M001892 ORTHO04x5M002029 4.4e-08 62.0 387 26.4
HORVU5Hr1G092270 Hordeum vulgare HOM04x5M001892 ORTHO04x5M002029 9.9e-08 60.8 158 29.7
Misin11G103400 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M117004 1.7e-07 60.1 150 43.3
Bradi1g56922 Brachypodium distachyon HOM04x5M007573 ORTHO04x5M009717 2.9e-07 59.3 89 50.6
PH01000510G0710 Phyllostachys edulis HOM04x5M000670 ORTHO04x5M000562 2.9e-07 59.3 49 67.3
AT3G11850 Arabidopsis thaliana HOM04x5M001892 ORTHO04x5M002029 3.8e-07 58.9 290 24.1
TraesCS5A02G370700 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 3.8e-07 58.9 158 29.1
Bradi4g07197 Brachypodium distachyon HOM04x5M001892 ORTHO04x5M002029 8.4e-07 57.8 135 32.6
Spipo2G0003000 Spirodela polyrhiza HOM04x5M001892 ORTHO04x5M002029 8.4e-07 57.8 331 26.6
Bradi1g13510 Brachypodium distachyon HOM04x5M001892 ORTHO04x5M002029 1.1e-06 57.4 244 26.2
Zjn_sc00055.1.g01090.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M001892 ORTHO04x5M002029 1.1e-06 57.4 96 45.8
Pgl_GLEAN_10015857 Cenchrus americanus HOM04x5M001892 ORTHO04x5M002029 1.4e-06 57.0 130 30.8
LP029679 Lolium perenne HOM04x5M001892 ORTHO04x5M002029 1.9e-06 56.6 253 26.1
CALSI_Maker00004612 Calamus simplicifolius HOM04x5M006438 ORTHO04x5M005516 3.2e-06 55.8 89 48.3
Ma05_g08510 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 3.2e-06 55.8 413 26.4
OB03G35530 Oryza brachyantha HOM04x5M001892 ORTHO04x5M002029 4.2e-06 55.5 158 31.0
TraesCS5B02G373100 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 4.2e-06 55.5 267 24.7
TRITD5Bv1G191030 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 4.2e-06 55.5 267 24.7

Amborella trichopoda (0 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (5 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (4 genes)
Lolium perenne (4 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (7 genes)
Musa acuminata (7 genes)
Oropetium thomaeum (0 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (4 genes)
Oryza sativa ssp. japonica (4 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (5 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (4 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (12 genes)
Triticum turgidum (7 genes)
Vitis vinifera (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (4 genes)