Monocots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Misin01G218400	Miscanthus sinensis	HOM04x5M004429	ORTHO04x5M003410	1.2e-110	402.1	251	100.0
Misin02G212200	Miscanthus sinensis	HOM04x5M004429	ORTHO04x5M003410	9.3e-95	349.4	254	90.6
Sspon.01G0018460-3D	Saccharum spontaneum	HOM04x5M004429	ORTHO04x5M003410	2.6e-81	304.7	250	84.8
Sspon.01G0018460-1A	Saccharum spontaneum	HOM04x5M004429	ORTHO04x5M003410	7.7e-81	303.1	253	83.8
Sspon.01G0018460-2C	Saccharum spontaneum	HOM04x5M004429	ORTHO04x5M003410	7.7e-81	303.1	253	83.8
Sobic.001G240900	Sorghum bicolor	HOM04x5M004429	ORTHO04x5M003410	7.7e-73	276.6	250	80.0
Zm00001d032903	Zea mays B73	HOM04x5M004429	ORTHO04x5M003410	1.1e-68	262.7	271	75.3
Zm00007a00037808	Zea mays B104	HOM04x5M004429	ORTHO04x5M003410	1.1e-68	262.7	271	75.3
Seita.9G245400	Setaria italica	HOM04x5M004429	ORTHO04x5M003410	1.4e-58	229.2	254	69.3
Zm00008a004326	Zea mays PH207	HOM04x5M004429	ORTHO04x5M003410	6.5e-56	220.3	260	64.6
Zjn_sc00020.1.g06840.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M004429	ORTHO04x5M003410	4.5e-41	171.0	252	45.2
Oropetium_20150105_25824	Oropetium thomaeum	HOM04x5M004429	ORTHO04x5M003410	6.6e-40	167.2	251	44.2
TRITD4Bv1G001520	Triticum turgidum	HOM04x5M004429	ORTHO04x5M003410	2.4e-34	148.7	251	49.8
TraesCS4D02G001100	Triticum aestivum	HOM04x5M004429	ORTHO04x5M003410	2.0e-33	145.6	256	48.4
TraesCS4B02G002200	Triticum aestivum	HOM04x5M004429	ORTHO04x5M003410	5.0e-32	141.0	242	49.2
HORVU4Hr1G000710	Hordeum vulgare	HOM04x5M004429	ORTHO04x5M003410	5.6e-31	137.5	209	45.0
TRITD4Av1G001550	Triticum turgidum	HOM04x5M004429	ORTHO04x5M003410	5.8e-28	127.5	251	43.4
LOC_Os10g29610	Oryza sativa ssp. japonica	HOM04x5M004429	ORTHO04x5M003410	1.7e-27	125.9	196	52.0
Bradi3g27170	Brachypodium distachyon	HOM04x5M004429	ORTHO04x5M003410	2.2e-27	125.6	170	48.8
TraesCS4A02G001200	Triticum aestivum	HOM04x5M004429	ORTHO04x5M003410	1.1e-26	123.2	168	47.0
Pgl_GLEAN_10033489	Cenchrus americanus	HOM04x5M004429	ORTHO04x5M003410	4.4e-20	101.3	65	80.0
LOC_Os03g06350	Oryza sativa ssp. japonica	HOM04x5M004429	ORTHO04x5M003410	1.7e-16	89.4	167	40.7
OsR498G0305258600.01	Oryza sativa ssp. indica	HOM04x5M004429	ORTHO04x5M003410	1.7e-16	89.4	167	40.7
LP014237	Lolium perenne	HOM04x5M004429	ORTHO04x5M003410	3.3e-15	85.1	159	40.9
HORVU4Hr1G073070	Hordeum vulgare	HOM04x5M004429	ORTHO04x5M003410	4.3e-15	84.7	171	37.4
Sspon.01G0003400-2B	Saccharum spontaneum	HOM04x5M004429	ORTHO04x5M003410	4.3e-15	84.7	164	40.9
Seita.9G533600	Setaria italica	HOM04x5M004429	ORTHO04x5M003410	1.6e-14	82.8	164	40.2
TraesCS4D02G273800	Triticum aestivum	HOM04x5M004429	ORTHO04x5M003410	1.6e-14	82.8	171	38.6
TRITD4Av1G010250	Triticum turgidum	HOM04x5M004429	ORTHO04x5M003410	1.6e-14	82.8	171	38.6
Zm00008a000405	Zea mays PH207	HOM04x5M004429	ORTHO04x5M003410	1.6e-14	82.8	170	35.3
TraesCS4B02G275200	Triticum aestivum	HOM04x5M004429	ORTHO04x5M003410	2.8e-14	82.0	177	38.4
TRITD4Bv1G163410	Triticum turgidum	HOM04x5M004429	ORTHO04x5M003410	2.8e-14	82.0	177	38.4
TraesCS4A02G030800	Triticum aestivum	HOM04x5M004429	ORTHO04x5M003410	4.7e-14	81.3	158	39.9
Misin01G476200	Miscanthus sinensis	HOM04x5M004429	ORTHO04x5M003410	6.2e-14	80.9	164	40.2
PH01000081G0900	Phyllostachys edulis	HOM04x5M004429	ORTHO04x5M003410	2.4e-13	79.0	158	38.0
Sobic.001G497800	Sorghum bicolor	HOM04x5M004429	ORTHO04x5M003410	2.4e-13	79.0	164	38.4
Sspon.01G0003400-1A	Saccharum spontaneum	HOM04x5M004429	ORTHO04x5M003410	4.0e-13	78.2	164	37.2
Bradi1g74520	Brachypodium distachyon	HOM04x5M004429	ORTHO04x5M003410	5.2e-13	77.8	171	35.1
Zjn_sc00040.1.g05280.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M000463	ORTHO04x5M003410	6.8e-13	77.4	103	50.5
Zjn_sc00003.1.g11750.1.sm.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M004429	ORTHO04x5M003410	1.5e-12	76.3	170	37.6
Ma04_g07560	Musa acuminata	HOM04x5M004429	ORTHO04x5M003410	2.0e-12	75.9	171	37.4
Misin02G468900	Miscanthus sinensis	HOM04x5M004429	ORTHO04x5M003410	2.0e-12	75.9	155	38.7
p5.00_sc00217_p0007	Elaeis guineensis	HOM04x5M004429	ORTHO04x5M003410	3.4e-12	75.1	156	38.5
Zjn_sc00002.1.g13910.1.sm.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M004429	ORTHO04x5M003410	4.4e-12	74.7	171	38.0
p5.00_sc00041_p0028	Elaeis guineensis	HOM04x5M004429	ORTHO04x5M003410	7.6e-12	73.9	158	38.0
CALSI_Maker00005213	Calamus simplicifolius	HOM04x5M004429	ORTHO04x5M003410	4.9e-11	71.2	156	37.2
CALSI_Maker00005207	Calamus simplicifolius	HOM04x5M004429	ORTHO04x5M003410	4.9e-11	71.2	156	37.2
Zm00001d027739	Zea mays B73	HOM04x5M004429	ORTHO04x5M003410	1.4e-10	69.7	66	56.1
Zm00007a00027151	Zea mays B104	HOM04x5M004429	ORTHO04x5M003410	1.4e-10	69.7	66	56.1
Aco004275	Ananas comosus	HOM04x5M004429	ORTHO04x5M003410	1.2e-09	66.6	158	35.4
Ma03_g32150	Musa acuminata	HOM04x5M004429	ORTHO04x5M003410	1.2e-09	66.6	164	40.2
Oropetium_20150105_00137	Oropetium thomaeum	HOM04x5M004429	ORTHO04x5M003410	2.7e-09	65.5	63	54.0
PEQU_38616	Phalaenopsis equestris	HOM04x5M004429	ORTHO04x5M003410	3.5e-09	65.1	151	33.8
PEQU_31986	Phalaenopsis equestris	HOM04x5M004429	ORTHO04x5M003410	3.5e-09	65.1	151	33.8
ASH_gene9119	Apostasia shenzhenica	HOM04x5M004429	ORTHO04x5M003410	4.3e-07	58.2	244	27.0
PEQU_41045	Phalaenopsis equestris	HOM04x5M004429	ORTHO04x5M003410	2.1e-06	55.8	169	33.1
CALSI_Maker00033485	Calamus simplicifolius	HOM04x5M004429	ORTHO04x5M003410	2.8e-06	55.5	49	61.2
Potri.002G051200	Populus trichocarpa	HOM04x5M000843	ORTHO04x5M003410	4.7e-06	54.7	182	27.5

External Sequences (optional)

External Sequences Type

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MSA algorithm
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