Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Mapoly0001s0484	Marchantia polymorpha	HOM04x5M009911	ORTHO04x5M012287	0.0e+00	1166.8	584	100.0
gene34055	Selaginella moellendorffii	HOM04x5M009911	ORTHO04x5M012287	1.2e-129	466.5	510	48.8
gene34127	Selaginella moellendorffii	HOM04x5M009911	ORTHO04x5M012287	1.6e-129	466.1	510	48.4
Pp3c22_18880	Physcomitrium patens	HOM04x5M009911	ORTHO04x5M012287	7.9e-129	463.8	507	49.9
Aco019296	Ananas comosus	HOM04x5M009911	ORTHO04x5M012287	1.3e-110	403.3	507	44.0
GSVIVG01034385001	Vitis vinifera	HOM04x5M009911	ORTHO04x5M012287	1.0e-107	393.7	499	43.7
Solyc04g008880.2	Solanum lycopersicum	HOM04x5M009911	ORTHO04x5M012287	2.1e-105	386.0	503	41.9
PEQU_15255	Phalaenopsis equestris	HOM04x5M009911	ORTHO04x5M012287	3.3e-103	378.6	494	42.7
ASH_gene21398	Apostasia shenzhenica	HOM04x5M009911	ORTHO04x5M012287	2.0e-100	369.4	508	41.9
CALSI_Maker00014129	Calamus simplicifolius	HOM04x5M009911	ORTHO04x5M012287	4.2e-82	308.5	411	43.8
CALSI_Maker00012862	Calamus simplicifolius	HOM04x5M009911	ORTHO04x5M012287	2.6e-71	272.7	267	49.4
PAB00050768	Picea abies	HOM04x5M009911	ORTHO04x5M012287	2.5e-58	229.6	235	47.7
PAB00022572	Picea abies	HOM04x5M009911	ORTHO04x5M012287	4.9e-46	188.7	265	41.5
Pp3s92_70	Physcomitrium patens	HOM04x5M009911	ORTHO04x5M172849	2.5e-18	96.7	393	25.7
gene13859	Selaginella moellendorffii	HOM04x5M003355	ORTHO04x5M004677	2.2e-09	67.0	305	24.9
gene30760	Selaginella moellendorffii	HOM04x5M003355	ORTHO04x5M004677	2.2e-09	67.0	305	24.9
PEQU_17496	Phalaenopsis equestris	HOM04x5M003355	ORTHO04x5M004677	4.8e-09	65.9	233	27.0
ASH_gene14768	Apostasia shenzhenica	HOM04x5M003355	ORTHO04x5M004677	8.2e-09	65.1	217	25.8
p5.00_sc00017_p0168	Elaeis guineensis	HOM04x5M003355	ORTHO04x5M004677	8.2e-09	65.1	220	28.6
Solyc08g081170.2	Solanum lycopersicum	HOM04x5M003355	ORTHO04x5M004677	3.1e-08	63.2	383	25.3
evm.TU.AsparagusV1_Unassigned.218.V1.1	Asparagus officinalis	HOM04x5M003355	ORTHO04x5M004677	6.9e-08	62.0	144	29.9
Pp3c23_15810	Physcomitrium patens	HOM04x5M003355	ORTHO04x5M004677	4.5e-07	59.3	290	24.5
p5.00_sc00197_p0046	Elaeis guineensis	HOM04x5M003355	ORTHO04x5M004677	5.9e-07	58.9	224	28.6
Ma10_g07880	Musa acuminata	HOM04x5M003355	ORTHO04x5M004677	5.9e-07	58.9	222	25.7
Spipo1G0029900	Spirodela polyrhiza	HOM04x5M003355	ORTHO04x5M004677	2.9e-06	56.6	166	28.9
evm.TU.AsparagusV1_07.2214.V1.1	Asparagus officinalis	HOM04x5M003355	ORTHO04x5M004677	6.5e-06	55.5	222	26.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment