Interactive Phylogenetics Module

Gene Id
LOC_Os11g03794

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os11g03794 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 6.8e-266 918.7 444 100.0
OsR498G1119370400.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 6.4e-264 912.1 444 99.5
OsR498G1220875600.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 4.0e-258 892.9 444 96.4
LOC_Os12g03540 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 1.5e-257 891.0 444 96.2
OB11G11590 Oryza brachyantha HOM04x5M004507 ORTHO04x5M005410 9.9e-241 835.1 444 90.8
HORVU5Hr1G045070 Hordeum vulgare HOM04x5M004507 ORTHO04x5M005410 4.5e-233 809.7 444 86.5
TraesCS5D02G152200 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 7.6e-233 808.9 444 86.9
TraesCS5A02G138500 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 1.9e-228 794.3 444 85.6
Sobic.008G017200 Sorghum bicolor HOM04x5M004507 ORTHO04x5M005410 3.3e-228 793.5 445 84.9
Misin15G007600 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 6.2e-227 789.3 445 84.7
Seita.7G310400 Setaria italica HOM04x5M004507 ORTHO04x5M005410 5.7e-220 766.1 444 83.8
LP033593 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 3.1e-218 760.4 444 82.2
Seita.8G003800 Setaria italica HOM04x5M004507 ORTHO04x5M005410 9.0e-218 758.8 445 83.8
MisinT482300 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 2.8e-203 710.7 406 82.8
Zm00008a036332 Zea mays PH207 HOM04x5M004507 ORTHO04x5M005410 4.8e-203 709.9 446 78.5
TraesCS5B02G138600 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 1.0e-200 702.2 444 78.2
TRITD5Bv1G088770 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 1.0e-200 702.2 444 78.2
TRITD5Av1G105920 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 2.5e-199 697.6 444 77.3
Oropetium_20150105_11037 Oropetium thomaeum HOM04x5M004507 ORTHO04x5M005410 6.7e-197 689.5 446 77.8
Sspon.07G0038610-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 6.5e-176 619.8 427 73.8
Potri.016G030400 Populus trichocarpa HOM04x5M004507 ORTHO04x5M005410 6.3e-171 603.2 448 63.2
Ma08_g26840 Musa acuminata HOM04x5M004507 ORTHO04x5M005410 1.5e-167 592.0 443 63.4
p5.00_sc00094_p0061 Elaeis guineensis HOM04x5M004507 ORTHO04x5M005410 3.4e-164 580.9 443 63.2
ASH_gene5141 Apostasia shenzhenica HOM04x5M004507 ORTHO04x5M005410 1.2e-161 572.4 446 60.5
Bradi4g43700 Brachypodium distachyon HOM04x5M004507 ORTHO04x5M005410 1.2e-150 535.8 426 65.3
AT3G56900 Arabidopsis thaliana HOM04x5M004507 ORTHO04x5M005410 3.1e-149 531.2 447 58.8
Zosma6g00180 Zostera marina HOM04x5M004507 ORTHO04x5M005410 8.9e-149 529.6 446 57.4
Pgl_GLEAN_10033199 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 5.4e-146 520.4 427 64.9
CALSI_Maker00048110 Calamus simplicifolius HOM04x5M004507 ORTHO04x5M005410 5.1e-136 487.3 402 60.9
OB12G11930 Oryza brachyantha HOM04x5M004507 ORTHO04x5M006219 1.2e-134 482.6 434 63.1
Sspon.07G0019960-1A Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 1.1e-127 459.5 383 63.2
Sspon.07G0038600-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 1.1e-125 453.0 440 57.3
Aco023948 Ananas comosus HOM04x5M004507 ORTHO04x5M005410 1.8e-125 452.2 407 58.2
Sspon.07G0019960-2C Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 2.5e-111 405.2 420 55.2
Mapoly0010s0124 Marchantia polymorpha HOM04x5M004507 ORTHO04x5M005410 5.8e-108 394.0 480 43.5
Zm00007a00022532 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 1.5e-103 379.4 200 90.0
gene10650 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 2.5e-103 378.6 479 40.9
gene36333 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 2.5e-103 378.6 479 40.9
Zm00001d023264 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 3.3e-103 378.3 229 79.9
Pp3c11_18220 Physcomitrium patens HOM04x5M004507 ORTHO04x5M005410 3.8e-99 364.8 460 41.1
Pgl_GLEAN_10009938 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 4.6e-97 357.8 313 61.7
GSVIVG01025850001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 3.7e-94 348.2 207 72.9
Sspon.07G0019960-1P Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 1.1e-87 326.6 246 68.7
evm.TU.AsparagusV1_02.1443.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 2.0e-87 325.9 198 75.3
ATR0307G134 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 4.8e-86 321.2 198 70.7
Spipo6G0054400 Spirodela polyrhiza HOM04x5M004507 ORTHO04x5M005410 9.4e-82 307.0 198 69.2
gene37195 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 7.9e-81 303.9 242 54.1
evm.TU.AsparagusV1_02.1442.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 1.7e-70 269.6 230 56.5
PEQU_35849 Phalaenopsis equestris HOM04x5M004507 ORTHO04x5M005410 7.2e-66 254.2 330 42.4
ATR0307G100 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 6.8e-56 221.1 234 46.6
Zm00001d023266 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 1.5e-50 203.4 121 85.1
Solyc08g036600.1 Solanum lycopersicum HOM04x5M004507 ORTHO04x5M005410 8.0e-49 197.6 205 46.3
LP035520 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 3.2e-45 185.7 95 88.4
GSVIVG01025851001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 8.0e-41 171.0 178 50.6
OsR498G1220885900.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 1.2e-39 167.2 93 90.3
PAB00036398 Picea abies HOM04x5M004507 ORTHO04x5M005410 1.6e-36 156.8 106 68.9
Zjn_sc00167.1.g00370.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 4.6e-36 155.2 152 57.2
Zjn_sc00067.1.g00340.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 1.8e-32 143.3 147 54.4
Zm00007a00022530 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 1.4e-29 133.7 106 64.2
LOC_Os12g03730 Oryza sativa ssp. japonica HOM04x5M000377 ORTHO04x5M000276 1.1e-24 117.5 176 46.6
MCO12G281 Micromonas commoda HOM04x5M004507 ORTHO04x5M005410 1.2e-20 104.0 223 29.1
LOC_Os12g03601 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 2.3e-19 99.8 54 90.7
Pgl_GLEAN_10018462 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 3.9e-11 72.4 90 48.9

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (4 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (3 genes)
Setaria italica (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings