Interactive Phylogenetics Module

Gene Id
LOC_Os09g10690

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os09g10690 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 7.3e-93 343.2 275 100.0
OsR498G0916902900.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 2.8e-92 341.3 275 99.6
HORVU5Hr1G053060 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 4.3e-53 211.1 276 54.0
TraesCS5B02G170300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 2.4e-51 205.3 275 53.5
TRITD5Bv1G106560 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 2.4e-51 205.3 275 53.5
TraesCS5D02G177400 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 2.9e-49 198.4 275 52.7
TraesCS5A02G172900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 4.2e-48 194.5 275 51.6
PH01001791G0500 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 3.0e-30 135.2 160 78.1
Ma04_g25960 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 1.3e-17 93.2 229 34.9
CALSI_Maker00035014 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 1.8e-14 82.8 254 28.3
CALSI_Maker00024525 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 1.8e-14 82.8 254 28.3
p5.00_sc00037_p0128 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 3.0e-14 82.0 254 28.3
Aco000750 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 8.9e-14 80.5 251 28.3
Spipo0G0076700 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 2.0e-13 79.3 222 30.6
Ma05_g24710 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 2.6e-13 79.0 246 29.7
CALSI_Maker00032976 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 1.3e-12 76.6 251 27.1
AT3G57990 Arabidopsis thaliana HOM04x5M002412 ORTHO04x5M002551 1.7e-12 76.3 238 27.7
Ma09_g12010 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 4.9e-12 74.7 238 29.0
evm.TU.AsparagusV1_04.1736.V1.1 Asparagus officinalis HOM04x5M002412 ORTHO04x5M002551 6.3e-12 74.3 199 36.7
OsR498G0816446400.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 8.3e-12 73.9 238 28.2
LOC_Os08g39990 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 1.1e-11 73.6 238 28.2
Ma06_g38250 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 4.1e-11 71.6 128 39.8
MisinT266100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 4.1e-11 71.6 251 32.7
Potri.006G191800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 4.1e-11 71.6 248 25.8
PH01001573G0110 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 7.0e-11 70.9 246 27.6
TraesCS5D02G274500 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 7.0e-11 70.9 246 27.2
Zm00007a00028357 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 7.0e-11 70.9 253 27.7
PEQU_14985 Phalaenopsis equestris HOM04x5M002412 ORTHO04x5M002551 9.2e-11 70.5 237 27.0
TraesCS5A02G266700 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 9.2e-11 70.5 251 27.9
TraesCS5B02G266300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 9.2e-11 70.5 246 27.2
TRITD5Bv1G149550 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 9.2e-11 70.5 246 27.2
p5.00_sc00131_p0014 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 1.2e-10 70.1 236 28.0
Sobic.002G248700 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 1.2e-10 70.1 251 27.5
Spipo12G0038000 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 1.2e-10 70.1 121 36.4
Sspon.06G0001760-3C Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.2e-10 70.1 247 27.1
Sspon.06G0001760-1P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.2e-10 70.1 251 31.5
Sspon.06G0001760-2P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.2e-10 70.1 251 31.5
HORVU5Hr1G073600 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 1.6e-10 69.7 246 27.2
Mapoly0061s0112 Marchantia polymorpha HOM04x5M002412 ORTHO04x5M002551 2.0e-10 69.3 121 37.2
LP013033 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 2.7e-10 68.9 223 26.9
Misin04G230000 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 2.7e-10 68.9 251 31.5
Zm00001d045948 Zea mays B73 HOM04x5M000039 ORTHO04x5M002551 2.7e-10 68.9 249 26.1
Zm00007a00028008 Zea mays B104 HOM04x5M000039 ORTHO04x5M002551 2.7e-10 68.9 249 26.1
Bradi3g40070 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 3.5e-10 68.6 237 27.0
Bradi4g33830 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 3.5e-10 68.6 250 27.2
Potri.T110800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 4.5e-10 68.2 244 25.4
Zm00008a009131 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 5.9e-10 67.8 251 27.1
LP030105 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 7.8e-10 67.4 240 27.1
Sobic.007G209400 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 7.8e-10 67.4 120 36.7
Sspon.06G0001760-4D Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 7.8e-10 67.4 247 26.7
Zm00001d052895 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 7.8e-10 67.4 238 27.3
Zm00007a00029929 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 7.8e-10 67.4 238 27.3
Zm00001d020948 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 1.0e-09 67.0 251 32.3
Zm00007a00035266 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 1.0e-09 67.0 251 32.3
Zm00001d006031 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 1.3e-09 66.6 253 26.9
Potri.016G046900 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 1.7e-09 66.2 244 25.0
Sspon.06G0001760-1A Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.7e-09 66.2 246 26.4
Misin13G182100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 2.3e-09 65.9 246 26.4
OB09G12140 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 2.3e-09 65.9 50 72.0
Zm00008a018045 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 2.3e-09 65.9 199 31.7
Pp3c4_23000 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 2.9e-09 65.5 123 36.6
Pp3c26_2720 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 3.8e-09 65.1 123 38.2
Sspon.06G0001760-2B Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 3.8e-09 65.1 247 26.3
TraesCS7B02G144200 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 5.0e-09 64.7 120 35.8
Aco018516 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 6.6e-09 64.3 247 25.5
ATR0049G071 Amborella trichopoda HOM04x5M002412 ORTHO04x5M002551 8.6e-09 63.9 229 27.1
TraesCS7A02G247300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.5e-08 63.2 239 25.9
TRITD7Av1G093150 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.5e-08 63.2 239 25.9
GSVIVG01033512001 Vitis vinifera HOM04x5M002412 ORTHO04x5M002551 1.5e-08 63.2 121 36.4
TRITD7Bv1G067520 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.9e-08 62.8 120 35.0
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 2.5e-08 62.4 120 35.8
TraesCS7D02G245900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 4.3e-08 61.6 239 25.9
OB08G26970 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 5.6e-08 61.2 246 28.9
Spipo5G0060300 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 5.6e-08 61.2 231 28.6
LOC_Os09g31458 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 1.2e-07 60.1 122 34.4
OsR498G0917731000.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 1.6e-07 59.7 122 33.6
Ma08_g25090 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 2.8e-07 58.9 248 24.6
CALSI_Maker00040825 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 3.6e-07 58.5 80 48.8
Zm00008a028438 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 3.6e-07 58.5 119 35.3
TRITD5Av1G160070 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.4e-06 56.6 251 25.9
PAB00042622 Picea abies HOM04x5M002412 ORTHO04x5M002551 1.8e-06 56.2 121 33.1

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (0 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (0 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (0 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (9 genes)
Triticum turgidum (5 genes)
Vitis vinifera (1 genes)
Zea mays B73 (4 genes)
Zea mays B104 (4 genes)
Zea mays PH207 (3 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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