Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HORVU6Hr1G063100 Hordeum vulgare HOM04x5M003245 ORTHO04x5M005668 2.0e-279 963.8 477 100.0
TraesCS6A02G249800 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 7.6e-271 935.3 476 96.8
TRITD6Av1G159240 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 7.6e-271 935.3 476 96.8
TraesCS6B02G275600 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 2.2e-270 933.7 476 96.6
TRITD6Bv1G145190 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 2.2e-270 933.7 476 96.6
TraesCS6D02G231500 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 8.9e-264 911.8 476 94.7
Bradi3g50726 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M005668 1.8e-248 860.9 476 90.1
LP006587 Lolium perenne HOM04x5M003245 ORTHO04x5M005668 3.1e-240 833.6 479 86.8
OB02G33900 Oryza brachyantha HOM04x5M003245 ORTHO04x5M005668 5.0e-222 773.1 478 82.2
Zm00007a00015682 Zea mays B104 HOM04x5M003245 ORTHO04x5M005668 1.4e-221 771.5 483 82.0
Zm00001d017492 Zea mays B73 HOM04x5M003245 ORTHO04x5M005668 4.2e-221 770.0 482 81.7
Seita.1G260300 Setaria italica HOM04x5M003245 ORTHO04x5M005668 5.5e-221 769.6 467 83.5
Sspon.01G0000930-1P Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 9.4e-221 768.8 466 83.5
OsR498G0204455800.01 Oryza sativa ssp. indica HOM04x5M003245 ORTHO04x5M005668 7.9e-220 765.8 480 81.2
LOC_Os02g44104 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M005668 1.1e-218 761.9 481 80.7
Oropetium_20150105_21240 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M005668 8.2e-217 755.7 480 80.8
Misin08G230600 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 2.9e-214 747.3 446 84.8
Misin07G434300 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 1.9e-213 744.6 422 88.2
Sspon.01G0000930-3D Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 9.4e-213 742.3 468 81.6
Sspon.01G0000930-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.4e-211 738.4 468 81.0
PH01000995G0530 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 2.6e-207 724.2 388 91.8
PH01003305G0030 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 2.2e-201 704.5 595 64.7
Sobic.004G294700 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 2.9e-177 624.4 391 81.8
p5.00_sc00002_p0220 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 8.9e-163 576.2 466 62.0
Zjn_sc00007.1.g10190.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003245 ORTHO04x5M005668 1.3e-161 572.4 436 70.0
Aco012817 Ananas comosus HOM04x5M003245 ORTHO04x5M005668 2.4e-160 568.2 469 62.5
Ma05_g13320 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 1.6e-151 538.9 474 58.4
Ma04_g20220 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 1.1e-149 532.7 482 58.9
Zm00008a022532 Zea mays PH207 HOM04x5M003245 ORTHO04x5M005668 1.8e-147 525.4 281 90.4
Pgl_GLEAN_10009580 Cenchrus americanus HOM04x5M003245 ORTHO04x5M005668 2.0e-146 521.9 280 90.0
Spipo11G0034400 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 3.5e-143 511.1 435 58.4
Ma04_g36850 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 4.6e-143 510.8 481 56.3
Spipo17G0022500 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 1.9e-136 488.8 471 53.3
CALSI_Maker00016894 Calamus simplicifolius HOM04x5M003245 ORTHO04x5M005668 7.9e-127 456.8 329 65.0
PEQU_14480 Phalaenopsis equestris HOM04x5M003245 ORTHO04x5M005668 2.1e-124 448.7 449 54.1
Zosma85g00440 Zostera marina HOM04x5M003245 ORTHO04x5M005668 3.4e-122 441.4 433 52.2
Potri.001G125800 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 3.2e-120 434.9 429 53.6
GSVIVG01014046001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 3.2e-120 434.9 431 53.4
Potri.003G107900 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 1.6e-119 432.6 429 52.9
PAB00017842 Picea abies HOM04x5M003245 ORTHO04x5M005668 5.1e-118 427.6 443 51.0
ASH_gene6044 Apostasia shenzhenica HOM04x5M003245 ORTHO04x5M005668 6.7e-118 427.2 484 48.6
Potri.002G143200 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 8.2e-116 420.2 445 50.8
Zosma85g00410 Zostera marina HOM04x5M003245 ORTHO04x5M005668 9.0e-115 416.8 464 47.8
Solyc01g095800.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 3.8e-113 411.4 446 51.1
Solyc03g093310.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 1.8e-110 402.5 432 50.9
ATR0317G122 Amborella trichopoda HOM04x5M003245 ORTHO04x5M005668 3.0e-110 401.7 490 45.9
AT5G51380 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 5.1e-110 401.0 428 50.0
AT5G51370 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 8.5e-105 383.6 426 48.8
gene2101 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 4.5e-98 361.3 485 44.3
GSVIVG01018169001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 4.5e-98 361.3 287 59.9
gene5137 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 1.0e-97 360.1 485 44.1
Potri.014G059100 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 2.9e-97 358.6 270 62.2
Pp3c14_8820 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 4.8e-92 341.3 526 39.4
Pp3c10_7500 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 2.5e-88 328.9 513 39.0
Spipo1G0082300 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 4.2e-88 328.2 376 48.1
PAB00008675 Picea abies HOM04x5M003245 ORTHO04x5M005668 4.8e-84 314.7 466 41.0
AT5G07670 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 1.3e-81 306.6 467 41.1
Mapoly0089s0010 Marchantia polymorpha HOM04x5M003245 ORTHO04x5M005668 1.8e-78 296.2 586 35.3
p5.00_sc00023_p0055 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 1.7e-73 279.6 287 54.7
Sobic.001G303825 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 1.2e-66 256.9 174 79.3
Sspon.01G0000930-2C Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.0e-65 253.8 152 86.8
gene29505 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 3.8e-12 75.9 413 27.1
gene31603 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 8.4e-12 74.7 413 26.9
gene10300 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 2.5e-11 73.2 413 26.9
gene29354 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 2.5e-11 73.2 413 26.9
gene34337 Selaginella moellendorffii HOM04x5M000398 ORTHO04x5M001566 2.3e-09 66.6 390 26.2
Seita.3G037200 Setaria italica HOM04x5M000398 ORTHO04x5M000623 3.0e-09 66.2 406 25.6
Sspon.04G0024290-1B Saccharum spontaneum HOM04x5M001801 ORTHO04x5M000731 6.7e-09 65.1 375 22.7
gene30975 Selaginella moellendorffii HOM04x5M000398 ORTHO04x5M001566 8.7e-09 64.7 390 26.4
GSVIVG01017859001 Vitis vinifera HOM04x5M005490 ORTHO04x5M004478 8.7e-09 64.7 220 30.5
AT2G25490 Arabidopsis thaliana HOM04x5M001828 ORTHO04x5M001806 1.1e-08 64.3 283 22.3
Ma09_g11000 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 1.1e-08 64.3 368 26.1
PAB00008463 Picea abies HOM04x5M002561 ORTHO04x5M002801 1.5e-08 63.9 383 20.9
Zm00008a014757 Zea mays PH207 HOM04x5M002561 ORTHO04x5M002801 1.5e-08 63.9 190 26.3
Spipo25G0007400 Spirodela polyrhiza HOM04x5M001710 ORTHO04x5M001818 1.9e-08 63.5 389 23.1
Potri.014G023500 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 4.3e-08 62.4 389 24.7
Potri.002G123100 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 4.3e-08 62.4 417 25.9
CALSI_Maker00022215 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 5.7e-08 62.0 184 27.7
Ma04_g12920 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 5.7e-08 62.0 398 24.6
CALSI_Maker00028890 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 9.6e-08 61.2 200 27.0
gene429 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 1.3e-07 60.8 291 25.1
LP026565 Lolium perenne HOM04x5M006240 ORTHO04x5M008259 1.6e-07 60.5 125 30.4
Solyc06g054440.2 Solanum lycopersicum HOM04x5M005490 ORTHO04x5M004478 1.6e-07 60.5 169 31.4
GSVIVG01030257001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 2.1e-07 60.1 258 19.4
Ma09_g20070 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 2.8e-07 59.7 436 24.3
ATR0490G002 Amborella trichopoda HOM04x5M001710 ORTHO04x5M001818 3.7e-07 59.3 210 30.5
Sspon.07G0012970-2B Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 3.7e-07 59.3 380 25.0
CALSI_Maker00032187 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 4.8e-07 58.9 183 26.2
CALSI_Maker00022218 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 4.8e-07 58.9 182 27.5
Misin16G034100 Miscanthus sinensis HOM04x5M000398 ORTHO04x5M000623 4.8e-07 58.9 379 24.5
p5.00_sc00109_p0004 Elaeis guineensis HOM04x5M001710 ORTHO04x5M001818 6.2e-07 58.5 453 23.0
PAB00028759 Picea abies HOM04x5M001710 ORTHO04x5M001818 6.2e-07 58.5 441 24.3
CALSI_Maker00027914 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 8.2e-07 58.2 171 28.1
CALSI_Maker00022210 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 8.2e-07 58.2 171 28.1
CALSI_Maker00035421 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 1.1e-06 57.8 183 26.8
Sspon.07G0012970-3C Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 1.1e-06 57.8 327 26.0
Potri.005G141800 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 1.8e-06 57.0 392 23.7
GSVIVG01024623001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 1.8e-06 57.0 137 24.8
CALSI_Maker00028887 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 2.4e-06 56.6 171 28.1
PAB00015691 Picea abies HOM04x5M002561 ORTHO04x5M002801 3.1e-06 56.2 240 21.7
CALSI_Maker00050090 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 4.0e-06 55.8 144 28.5
AT1G47056 Arabidopsis thaliana HOM04x5M001710 ORTHO04x5M001818 5.3e-06 55.5 190 27.4
Sobic.009G045300 Sorghum bicolor HOM04x5M000398 ORTHO04x5M000623 5.3e-06 55.5 408 24.5
Spipo23G0043100 Spirodela polyrhiza HOM04x5M002561 ORTHO04x5M002801 6.9e-06 55.1 166 23.5
TraesCS4D02G148000 Triticum aestivum HOM04x5M005490 ORTHO04x5M004478 9.0e-06 54.7 181 29.3
TraesCS1B02G008900 Triticum aestivum HOM04x5M001010 ORTHO04x5M000824 9.0e-06 54.7 206 26.7

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (10 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (6 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (5 genes)
Populus trichocarpa (7 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (9 genes)
Setaria italica (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (5 genes)
Triticum turgidum (2 genes)
Vitis vinifera (5 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)