Interactive Phylogenetics Module

Gene Id
CALSI_Maker00049314

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CALSI_Maker00049314 Calamus simplicifolius HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1381.7 742 100.0
p5.00_sc00130_p0014 Elaeis guineensis HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1110.9 656 87.0
Ma08_g26180 Musa acuminata HOM04x5M001635 ORTHO04x5M001655 4.9e-277 956.4 710 71.8
evm.TU.AsparagusV1_05.1619.V1.1 Asparagus officinalis HOM04x5M001635 ORTHO04x5M001655 1.3e-261 905.2 639 74.0
Sobic.003G271400 Sorghum bicolor HOM04x5M001635 ORTHO04x5M001655 6.3e-232 806.6 678 64.7
TraesCS3B02G285500 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 2.9e-229 797.7 684 62.1
TraesCS3D02G254500 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 2.9e-229 797.7 684 62.0
TRITD3Bv1G148710 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 2.9e-229 797.7 684 62.1
Pgl_GLEAN_10020851 Cenchrus americanus HOM04x5M001635 ORTHO04x5M001655 5.0e-229 797.0 654 64.2
Sspon.03G0004960-2B Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 5.0e-229 797.0 677 64.3
Seita.5G287500 Setaria italica HOM04x5M001635 ORTHO04x5M001655 4.2e-228 793.9 650 64.5
Zm00001d043721 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 9.4e-228 792.7 685 63.1
Zm00008a014036 Zea mays PH207 HOM04x5M001635 ORTHO04x5M001655 9.4e-228 792.7 685 63.1
Zm00007a00023159 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 4.7e-227 790.4 685 62.9
Bradi2g47670 Brachypodium distachyon HOM04x5M001635 ORTHO04x5M001655 8.0e-227 789.6 664 63.9
GSVIVG01023836001 Vitis vinifera HOM04x5M001635 ORTHO04x5M001655 1.8e-226 788.5 641 65.1
TraesCS3A02G253600 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 2.8e-224 781.2 657 63.0
ASH_gene16076 Apostasia shenzhenica HOM04x5M001635 ORTHO04x5M001655 4.1e-223 777.3 692 61.4
OB01G37140 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 7.0e-223 776.5 664 62.7
Spipo5G0034800 Spirodela polyrhiza HOM04x5M001635 ORTHO04x5M001655 2.0e-222 775.0 656 64.5
PEQU_15165 Phalaenopsis equestris HOM04x5M001635 ORTHO04x5M001655 6.5e-221 770.0 609 67.0
OsR498G0101847100.01 Oryza sativa ssp. indica HOM04x5M001635 ORTHO04x5M001655 8.5e-221 769.6 680 61.8
ATR0605G301 Amborella trichopoda HOM04x5M001635 ORTHO04x5M001655 9.4e-220 766.1 680 61.0
Misin06G245200 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 3.6e-211 737.6 644 61.6
Sspon.03G0004960-1A Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 3.4e-209 731.1 698 60.2
Misin05G261200 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 2.1e-203 711.8 588 66.3
Oropetium_20150105_26368 Oropetium thomaeum HOM04x5M001635 ORTHO04x5M001655 9.5e-196 686.4 619 60.7
AT4G35440 Arabidopsis thaliana HOM04x5M001635 ORTHO04x5M001655 1.4e-191 672.5 651 57.5
Mapoly0001s0400 Marchantia polymorpha HOM04x5M001635 ORTHO04x5M001655 4.4e-177 624.4 718 49.9
PH01000527G0910 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 5.8e-177 624.0 567 61.6
Pp3c13_4410 Physcomitrium patens HOM04x5M001635 ORTHO04x5M001655 2.3e-165 585.5 749 47.1
PH01000783G0570 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 1.1e-164 583.2 456 67.1
Zjn_sc00011.1.g01090.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 4.3e-164 581.3 392 75.5
Aco017096 Ananas comosus HOM04x5M001635 ORTHO04x5M001655 5.6e-164 580.9 461 68.8
TRITD3Av1G169960 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 1.7e-160 569.3 487 62.2
LP039746 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 4.6e-158 561.2 496 61.7
gene33693 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 3.1e-146 521.9 674 45.8
gene15803 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 1.5e-145 519.6 674 45.7
PAB00016374 Picea abies HOM04x5M001635 ORTHO04x5M001655 2.9e-136 488.8 415 61.9
HORVU3Hr1G066240 Hordeum vulgare HOM04x5M001635 ORTHO04x5M001655 9.1e-130 467.2 421 58.9
LOC_Os01g50860 Oryza sativa ssp. japonica HOM04x5M001635 ORTHO04x5M001655 5.7e-124 448.0 425 58.1
Mapoly0179s0012 Marchantia polymorpha HOM04x5M001635 ORTHO04x5M001655 3.1e-122 442.2 682 41.1
Ma10_g31480 Musa acuminata HOM04x5M001635 ORTHO04x5M001655 1.6e-121 439.9 661 41.6
ATR0598G243 Amborella trichopoda HOM04x5M001635 ORTHO04x5M001655 2.6e-121 439.1 653 41.2
Solyc01g112310.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 4.5e-121 438.3 431 56.4
PEQU_24498 Phalaenopsis equestris HOM04x5M001635 ORTHO04x5M001655 7.7e-121 437.6 657 41.1
Spipo12G0024700 Spirodela polyrhiza HOM04x5M001635 ORTHO04x5M001655 5.0e-120 434.9 696 39.9
GSVIVG01014852001 Vitis vinifera HOM04x5M001635 ORTHO04x5M001655 5.0e-120 434.9 658 41.0
Aco015315 Ananas comosus HOM04x5M001635 ORTHO04x5M001655 6.5e-120 434.5 659 41.6
AT1G55620 Arabidopsis thaliana HOM04x5M001635 ORTHO04x5M001655 6.5e-120 434.5 648 42.1
TRITD7Bv1G062710 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 1.1e-119 433.7 675 41.5
evm.TU.AsparagusV1_05.2119.V1.1 Asparagus officinalis HOM04x5M001635 ORTHO04x5M001655 3.2e-119 432.2 662 42.1
LP022520 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 3.2e-119 432.2 649 41.6
Pp3c23_11730 Physcomitrium patens HOM04x5M001635 ORTHO04x5M001655 4.2e-119 431.8 727 39.5
Solyc07g066210.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 4.2e-119 431.8 715 39.4
Zosma51g00410 Zostera marina HOM04x5M001635 ORTHO04x5M001655 4.2e-119 431.8 666 40.4
HORVU6Hr1G071200 Hordeum vulgare HOM04x5M001635 ORTHO04x5M001655 9.4e-119 430.6 656 41.6
TraesCS7B02G136300 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 9.4e-119 430.6 664 41.7
p5.00_sc00198_p0029 Elaeis guineensis HOM04x5M001635 ORTHO04x5M001655 2.1e-118 429.5 664 41.4
p5.00_sc00055_p0069 Elaeis guineensis HOM04x5M001635 ORTHO04x5M001655 2.1e-118 429.5 678 40.9
Pp3c24_12700 Physcomitrium patens HOM04x5M001635 ORTHO04x5M001655 2.1e-118 429.5 727 39.6
TRITD7Av1G088580 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 2.1e-118 429.5 674 41.2
Solyc10g005690.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 2.7e-118 429.1 681 41.0
TraesCS6D02G264100 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 2.7e-118 429.1 686 39.9
Aco000832 Ananas comosus HOM04x5M001635 ORTHO04x5M001655 3.6e-118 428.7 665 40.5
TRITD6Bv1G167010 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 8.0e-118 427.6 686 39.9
Pgl_GLEAN_10010186 Cenchrus americanus HOM04x5M001635 ORTHO04x5M001655 1.0e-117 427.2 676 40.2
TraesCS7D02G239700 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 1.0e-117 427.2 663 41.5
Zm00001d031318 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 1.0e-117 427.2 654 41.1
Zm00007a00037310 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 1.0e-117 427.2 654 41.1
ASH_gene15628 Apostasia shenzhenica HOM04x5M001635 ORTHO04x5M001655 1.4e-117 426.8 668 41.2
Sobic.007G218000 Sorghum bicolor HOM04x5M001635 ORTHO04x5M001655 1.4e-117 426.8 655 41.5
Sspon.06G0000980-2B Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 1.8e-117 426.4 655 41.5
TraesCS7A02G240700 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 1.8e-117 426.4 663 41.5
Seita.6G198100 Setaria italica HOM04x5M001635 ORTHO04x5M001655 2.3e-117 426.0 655 41.7
Bradi3g39350 Brachypodium distachyon HOM04x5M001635 ORTHO04x5M001655 4.0e-117 425.2 717 39.9
Sobic.004G257800 Sorghum bicolor HOM04x5M001635 ORTHO04x5M001655 6.7e-117 424.5 628 41.6
Pgl_GLEAN_10012622 Cenchrus americanus HOM04x5M001635 ORTHO04x5M001655 8.8e-117 424.1 726 39.4
Misin07G221400 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 8.8e-117 424.1 655 41.8
OB02G37640 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 8.8e-117 424.1 699 39.2
Sspon.04G0004760-2B Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 8.8e-117 424.1 641 40.9
Zm00001d017868 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 4.4e-116 421.8 642 40.7
Zm00007a00011266 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 4.4e-116 421.8 642 40.7
CALSI_Maker00049403 Calamus simplicifolius HOM04x5M001635 ORTHO04x5M001655 7.5e-116 421.0 703 39.1
Zjn_sc00106.1.g00090.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 7.5e-116 421.0 666 41.4
OB08G26380 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 9.7e-116 420.6 661 41.5
LOC_Os02g48880 Oryza sativa ssp. japonica HOM04x5M001635 ORTHO04x5M001655 9.7e-116 420.6 661 39.9
Oropetium_20150105_19210 Oropetium thomaeum HOM04x5M001635 ORTHO04x5M001655 1.3e-115 420.2 650 40.2
Zm00001d017865 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 1.3e-115 420.2 642 40.7
Zm00007a00011263 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 1.3e-115 420.2 642 40.7
LP024409 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 1.7e-115 419.9 721 39.9
Misin08G264900 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 2.8e-115 419.1 641 40.6
OsR498G0204665200.01 Oryza sativa ssp. indica HOM04x5M001635 ORTHO04x5M001655 2.4e-114 416.0 712 38.6
LOC_Os08g38980 Oryza sativa ssp. japonica HOM04x5M001635 ORTHO04x5M001655 4.1e-114 415.2 657 40.8
OsR498G0816395300.01 Oryza sativa ssp. indica HOM04x5M001635 ORTHO04x5M001655 4.1e-114 415.2 657 40.8
Potri.001G472700 Populus trichocarpa HOM04x5M001635 ORTHO04x5M001655 4.1e-114 415.2 620 41.1
gene3495 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 4.5e-113 411.8 665 40.2
Seita.1G299300 Setaria italica HOM04x5M001635 ORTHO04x5M001655 1.0e-112 410.6 614 42.3
Zosma45g00340 Zostera marina HOM04x5M001635 ORTHO04x5M001655 3.8e-112 408.7 655 39.2
Zm00008a022840 Zea mays PH207 HOM04x5M001635 ORTHO04x5M001655 6.5e-112 407.9 610 41.8
gene23470 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 2.7e-110 402.5 665 39.7
Zjn_sc00015.1.g04990.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 5.2e-109 398.3 561 43.7
Potri.004G209901 Populus trichocarpa HOM04x5M001635 ORTHO04x5M001655 1.1e-106 390.6 435 51.7
Sspon.06G0000980-3C Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 4.1e-106 388.7 625 41.0
Oropetium_20150105_20292 Oropetium thomaeum HOM04x5M001635 ORTHO04x5M001655 5.4e-106 388.3 659 39.8
PAB00008647 Picea abies HOM04x5M001635 ORTHO04x5M001655 5.4e-106 388.3 613 42.4
Zm00008a018024 Zea mays PH207 HOM04x5M001750 ORTHO04x5M001795 9.1e-106 387.5 619 40.9
Sspon.04G0004760-1A Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 4.5e-105 385.2 641 39.0
Misin13G191700 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 1.7e-104 383.3 443 48.8
PH01003535G0210 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 2.9e-104 382.5 543 43.3
PH01000212G1260 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 8.5e-104 380.9 604 40.1
TraesCS6B02G312100 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 1.6e-102 376.7 491 44.8
TRITD6Av1G178430 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 1.0e-101 374.0 520 44.0
Zm00008a003140 Zea mays PH207 HOM04x5M001635 ORTHO04x5M001655 3.7e-99 365.5 562 42.5
Sspon.06G0000980-1A Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 1.5e-95 353.6 655 36.9
Bradi3g56670 Brachypodium distachyon HOM04x5M001635 ORTHO04x5M001655 4.1e-90 335.5 704 34.4
Sspon.04G0004760-3C Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 5.9e-89 331.6 450 45.1
Misin07G467900 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 5.4e-82 308.5 533 39.6
TraesCS6A02G283600 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 1.2e-81 307.4 378 47.9
Zm00001d052845 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 3.0e-80 302.8 418 43.5
CALSI_Maker00007099 Calamus simplicifolius HOM04x5M001635 ORTHO04x5M001655 2.5e-79 299.7 691 34.7
Sspon.06G0000980-4D Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 6.2e-78 295.0 661 34.0
Solyc01g112300.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 8.3e-75 284.6 217 67.7
MCO03G425 Micromonas commoda HOM04x5M001635 ORTHO04x5M001655 2.7e-73 279.6 506 40.7
Misin07G220200 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 6.9e-61 238.4 549 34.6
PH01000435G0830 Phyllostachys edulis HOM04x5M001750 ORTHO04x5M001795 5.8e-60 235.3 623 30.3
HORVU7Hr1G049110 Hordeum vulgare HOM04x5M001635 ORTHO04x5M001655 3.9e-56 222.6 422 37.9
Sspon.04G0004760-4D Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 3.9e-48 196.1 229 46.3
LP039744 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 4.3e-47 192.6 136 68.4
Cre01.g037150 Chlamydomonas reinhardtii HOM04x5M001635 ORTHO04x5M001655 4.9e-35 152.5 652 27.9
Zm00001d051050 Zea mays B73 HOM04x5M002289 ORTHO04x5M001655 8.4e-35 151.8 186 47.8
Zm00007a00005054 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 8.4e-35 151.8 186 47.8
Zjn_sc00007.1.g06530.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 8.7e-32 141.7 164 43.9
OB03G29070 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 2.5e-23 113.6 167 37.1
Zm00007a00017168 Zea mays B104 HOM04x5M001750 ORTHO04x5M001795 5.7e-23 112.5 106 59.4
Sspon.04G0004760-1P Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 2.6e-20 103.6 169 40.8
PAB00009259 Picea abies HOM04x5M001635 ORTHO04x5M001655 4.5e-20 102.8 146 39.7
Zm00007a00020952 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 2.7e-17 93.6 87 62.1
PH01000527G0930 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 1.0e-11 75.1 73 49.3
Zm00001d020588 Zea mays B73 HOM04x5M002289 ORTHO04x5M030796 2.9e-11 73.6 74 58.1
Zm00008a028148 Zea mays PH207 HOM04x5M002289 ORTHO04x5M030796 1.9e-10 70.9 44 81.8
Sspon.06G0000980-1P Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 3.9e-08 63.2 233 28.8
Zm00001d020635 Zea mays B73 HOM04x5M002289 ORTHO04x5M030493 3.9e-08 63.2 49 67.3
Zm00007a00026665 Zea mays B104 HOM04x5M002289 ORTHO04x5M030493 3.9e-08 63.2 49 67.3
Zm00007a00037600 Zea mays B104 HOM04x5M002289 ORTHO04x5M031114 6.7e-08 62.4 68 51.5
Zm00008a016711 Zea mays PH207 HOM04x5M001635 ORTHO04x5M031114 6.7e-08 62.4 68 51.5
Zm00001d051103 Zea mays B73 HOM04x5M002289 ORTHO04x5M003511 3.3e-07 60.1 35 85.7
Zm00007a00028237 Zea mays B104 HOM04x5M001635 ORTHO04x5M251830 3.3e-07 60.1 161 35.4
gene17989 Selaginella moellendorffii HOM04x5M000566 ORTHO04x5M013950 3.7e-06 56.6 434 22.6
gene37023 Selaginella moellendorffii HOM04x5M000566 ORTHO04x5M013950 3.7e-06 56.6 434 22.6

Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (4 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (7 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (4 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (6 genes)
Physcomitrium patens (3 genes)
Picea abies (3 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (12 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (2 genes)
Zea mays B73 (9 genes)
Zea mays B104 (10 genes)
Zea mays PH207 (6 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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