Interactive Phylogenetics Module

Gene Id
CALSI_Maker00032487

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1382.1 730 100.0
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 5.5e-305 1049.3 755 76.6
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 5.5e-297 1022.7 665 78.5
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 8.0e-288 992.3 759 70.2
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 4.4e-286 986.5 651 76.7
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-285 984.9 656 75.9
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 2.8e-285 983.8 656 75.9
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 6.3e-285 982.6 643 77.1
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 4.1e-284 979.9 644 76.9
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 9.1e-284 978.8 651 75.9
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 9.4e-281 968.8 643 75.6
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 1.6e-280 968.0 661 74.4
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 2.1e-280 967.6 637 76.1
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 4.7e-280 966.5 717 70.7
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 8.0e-280 965.7 661 74.3
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 1.0e-279 965.3 639 76.4
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 1.0e-279 965.3 639 76.4
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.8e-279 964.5 640 76.4
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 3.0e-279 963.8 643 75.4
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 1.5e-278 961.4 639 76.2
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 4.4e-278 959.9 627 77.2
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 9.8e-278 958.7 643 74.8
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 4.5e-275 949.9 666 73.7
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 2.3e-274 947.6 617 77.1
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 8.3e-269 929.1 651 71.1
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 2.8e-264 914.1 640 73.0
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 3.6e-264 913.7 645 72.4
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 5.8e-262 906.4 656 71.5
GSVIVG01031470001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 4.1e-260 900.2 655 70.4
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 9.5e-257 889.0 671 66.6
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 2.1e-256 887.9 612 73.7
ATR0329G039 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 8.0e-256 885.9 655 69.5
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 4.0e-255 883.6 622 70.7
AT1G08130 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 2.4e-252 874.4 633 67.9
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 1.2e-240 835.5 586 72.7
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 8.1e-240 832.8 638 64.6
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 8.1e-240 832.8 638 64.6
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.2e-238 828.9 631 66.6
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 5.8e-238 826.6 661 62.9
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 9.9e-238 825.9 631 66.2
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 1.3e-224 782.3 487 80.7
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.2e-222 775.8 569 69.9
AT1G49250 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 1.9e-204 715.3 603 60.4
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 5.7e-177 624.0 616 54.7
Sspon.01G0019980-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.2e-176 622.1 436 72.9
Cre07.g325716 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 3.2e-172 608.2 639 50.7
Oropetium_20150105_11084 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 1.3e-152 543.1 681 48.8
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 8.1e-131 470.7 658 40.4
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 6.6e-125 451.1 661 38.4
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 4.4e-121 438.3 629 37.7
ASH_gene7517 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 7.6e-121 437.6 639 38.2
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 9.9e-121 437.2 654 37.9
PH01000186G0040 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 9.9e-121 437.2 309 71.8
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.2e-120 436.0 629 37.2
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 2.9e-120 435.6 679 38.0
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 2.9e-120 435.6 668 36.5
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 4.9e-120 434.9 652 36.3
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 4.9e-120 434.9 631 36.9
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 8.4e-120 434.1 644 36.8
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 8.4e-120 434.1 644 36.8
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 2.4e-119 432.6 629 36.9
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 3.2e-119 432.2 651 36.3
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 3.2e-119 432.2 646 37.6
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 7.1e-119 431.0 631 37.6
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.6e-118 429.9 659 36.1
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 2.7e-118 429.1 652 36.3
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 7.8e-118 427.6 663 37.3
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 1.3e-117 426.8 630 36.2
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 3.9e-117 425.2 655 37.4
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.9e-108 396.4 530 41.5
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 1.2e-105 387.1 659 35.1
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 3.4e-105 385.6 694 33.4
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 4.6e-102 375.2 279 69.2
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 1.1e-98 364.0 520 37.5
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 1.5e-97 360.1 629 33.4
Zjn_sc00017.1.g06380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 4.5e-89 332.0 636 37.9
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 6.5e-88 328.2 474 37.6
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 3.9e-85 318.9 613 35.6
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 3.3e-84 315.8 563 32.7
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 5.0e-72 275.4 463 34.6
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.3e-69 266.5 421 35.6
p5.00_sc00008_p0159 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 1.7e-59 233.8 373 34.0
Aco000044 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 3.8e-56 222.6 439 31.7
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 8.5e-56 221.5 387 32.8
ATR0749G050 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 7.2e-47 191.8 127 74.8
Sspon.03G0031770-2C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.3e-45 186.8 387 31.8
PAB00000364 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.0e-45 186.0 116 76.7
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 2.0e-44 183.7 270 36.3
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 7.7e-41 171.8 436 28.2
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 2.1e-38 163.7 206 41.7
PAB00001978 Picea abies HOM04x5M001747 ORTHO04x5M002018 3.6e-38 162.9 203 47.8
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 3.6e-38 162.9 205 39.0
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 4.0e-37 159.5 194 40.7
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 2.7e-33 146.7 253 35.6
Spipo19G0024800 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 1.9e-31 140.6 230 37.0
PAB00006638 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.2e-30 137.9 175 37.7
ATR0749G104 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 8.0e-30 135.2 104 67.3
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 7.5e-28 128.6 242 32.2
PAB00058901 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.9e-27 125.9 75 80.0
Zm00008a014123 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.0e-24 118.2 142 40.1
Potri.004G094200 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 5.0e-24 115.9 152 38.8
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 4.3e-23 112.8 372 25.5
Zjn_sc00011.1.g00310.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 4.3e-23 112.8 153 35.9
Potri.018G141900 Populus trichocarpa HOM04x5M004601 ORTHO04x5M005443 7.3e-23 112.1 382 27.2
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 7.3e-23 112.1 617 23.2
Sobic.006G207300 Sorghum bicolor HOM04x5M004601 ORTHO04x5M005443 1.2e-22 111.3 630 22.2
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.1e-22 110.5 619 23.4
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 3.6e-22 109.8 383 25.3
Ma01_g18780 Musa acuminata HOM04x5M004601 ORTHO04x5M005443 1.4e-21 107.8 383 25.8
TraesCS2B02G453300 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 1.8e-21 107.5 415 25.5
TRITD2Av1G250540 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 6.8e-21 105.5 417 25.9
Sspon.03G0009130-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 8.9e-21 105.1 147 36.7
TRITD2Bv1G212650 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 1.2e-20 104.8 623 23.3
GSVIVG01029314001 Vitis vinifera HOM04x5M004601 ORTHO04x5M005443 1.2e-20 104.8 384 26.3
PEQU_25681 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 2.6e-20 103.6 381 27.3
CALSI_Maker00020618 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 7.5e-20 102.1 145 38.6
PAB00036263 Picea abies HOM04x5M001747 ORTHO04x5M002018 9.8e-20 101.7 90 60.0
PH01000224G0720 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 1.7e-19 100.9 389 25.7
Solyc07g017990.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 2.2e-19 100.5 351 25.6
ATR0626G236 Amborella trichopoda HOM04x5M004601 ORTHO04x5M005443 3.7e-19 99.8 645 22.9
Zjn_sc00023.1.g02440.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004601 ORTHO04x5M005443 6.4e-19 99.0 384 24.2
Zm00001d002390 Zea mays B73 HOM04x5M004601 ORTHO04x5M005443 1.1e-18 98.2 378 24.6
LP005256 Lolium perenne HOM04x5M004601 ORTHO04x5M005443 1.4e-18 97.8 414 25.4
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 1.4e-18 97.8 365 25.2
Oropetium_20150105_01621 Oropetium thomaeum HOM04x5M004601 ORTHO04x5M005443 9.2e-18 95.1 348 25.0
Mapoly0001s0137 Marchantia polymorpha HOM04x5M004601 ORTHO04x5M005443 1.7e-16 90.9 255 26.7
Seita.7G229000 Setaria italica HOM04x5M004601 ORTHO04x5M005443 3.0e-16 90.1 289 24.6
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 3.3e-15 86.7 78 51.3
Zm00007a00052093 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 7.3e-15 85.5 94 41.5
Misin05G212300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.6e-14 84.3 94 41.5
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.1e-14 84.0 100 46.0
Zm00008a014122 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 4.7e-14 82.8 102 38.2
Cre10.g433550 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 1.8e-13 80.9 430 23.0
ATR0749G026 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 2.3e-13 80.5 56 69.6
Spipo0G0169600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M013120 1.2e-09 68.2 89 40.4
evm.TU.AsparagusV1_04.1989.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.1e-09 67.4 49 59.2
CALSI_Maker00003384 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 2.1e-09 67.4 85 38.8
CALSI_Maker00023721 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 4.6e-09 66.2 67 43.3
Zm00007a00029334 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 5.1e-08 62.8 67 40.3
CALSI_Maker00001347 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 1.9e-07 60.8 145 29.7
Sspon.03G0031770-3D Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.5e-07 60.5 248 23.8

Amborella trichopoda (6 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (6 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (4 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings