Interactive Phylogenetics Module

Gene Id
CALSI_Maker00011868

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CALSI_Maker00011868 Calamus simplicifolius HOM04x5M003029 ORTHO04x5M004024 0.0e+00 3524.2 1780 100.0
Aco023287 Ananas comosus HOM04x5M003029 ORTHO04x5M004024 0.0e+00 3125.9 1851 85.3
evm.TU.AsparagusV1_07.782.V1.1 Asparagus officinalis HOM04x5M003029 ORTHO04x5M004024 0.0e+00 3060.8 1853 84.0
p5.00_sc00007_p0165 Elaeis guineensis HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2955.6 1663 91.1
Seita.9G417500 Setaria italica HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2946.4 1844 81.5
Sobic.001G385400 Sorghum bicolor HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2934.8 1848 81.1
Pgl_GLEAN_10015221 Cenchrus americanus HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2931.0 1847 81.1
GSVIVG01014992001 Vitis vinifera HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2931.0 1847 80.7
ATR0068G076 Amborella trichopoda HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2927.9 1854 80.0
OB03G25690 Oryza brachyantha HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2911.3 1844 80.8
Potri.011G024000 Populus trichocarpa HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2897.5 1848 79.0
HORVU4Hr1G051250 Hordeum vulgare HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2895.5 1844 80.3
Misin02G356400 Miscanthus sinensis HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2894.4 1851 80.2
TraesCS4B02G173500 Triticum aestivum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2891.3 1852 79.7
TraesCS4A02G131100 Triticum aestivum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2886.3 1852 79.6
TraesCS4D02G175600 Triticum aestivum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2885.9 1852 79.6
TRITD4Bv1G108240 Triticum turgidum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2863.6 1823 80.0
LP022529 Lolium perenne HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2862.4 1851 79.0
Oropetium_20150105_01208 Oropetium thomaeum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2857.0 1852 79.4
LP027791 Lolium perenne HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2856.2 1852 78.8
TRITD4Av1G067680 Triticum turgidum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2843.5 1852 78.8
Zm00001d029004 Zea mays B73 HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2840.1 1800 80.7
Bradi5g24268 Brachypodium distachyon HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2838.5 1843 79.5
Zm00007a00023843 Zea mays B104 HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2799.2 1848 77.8
ASH_gene8690 Apostasia shenzhenica HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2797.7 1853 77.5
Zosma31g00920 Zostera marina HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2790.0 1847 76.8
Zm00007a00028301 Zea mays B104 HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2766.5 1832 77.7
AT4G16340 Arabidopsis thaliana HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2730.7 1843 75.3
Bradi3g31490 Brachypodium distachyon HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2644.8 1840 75.2
Spipo3G0013300 Spirodela polyrhiza HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2510.3 1685 77.3
Mapoly0021s0072 Marchantia polymorpha HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2420.6 1856 67.7
Sspon.01G0038290-1B Saccharum spontaneum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2412.9 1848 70.0
Pp3c1_25190 Physcomitrium patens HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2177.9 1887 60.4
Pp3c3_15370 Physcomitrium patens HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2163.7 1900 60.2
Pp3c4_25310 Physcomitrium patens HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2153.3 1892 60.4
Pp3c9_15160 Physcomitrium patens HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2137.1 1862 59.8
Pp3c10_16640 Physcomitrium patens HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2135.1 1892 59.5
Pp3c15_8680 Physcomitrium patens HOM04x5M003029 ORTHO04x5M004024 0.0e+00 2072.4 1858 58.5
OsR498G0305870500.01 Oryza sativa ssp. indica HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1884.8 1142 84.5
PH01001292G0230 Phyllostachys edulis HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1849.7 1144 83.2
Zm00008a035388 Zea mays PH207 HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1771.9 1127 81.5
Zm00001d047540 Zea mays B73 HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1723.0 1175 75.4
Ma10_g13040 Musa acuminata HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1706.4 1027 85.9
Zm00008a001377 Zea mays PH207 HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1643.6 1068 79.6
MisinT403000 Miscanthus sinensis HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1613.2 1091 75.1
Zjn_sc00003.1.g01680.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1610.1 1377 63.7
LOC_Os03g21080 Oryza sativa ssp. japonica HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1545.4 968 82.5
Sspon.01G0038290-2D Saccharum spontaneum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1441.0 909 79.4
PAB00016775 Picea abies HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1412.9 933 79.0
Sspon.01G0038290-1T Saccharum spontaneum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1378.6 806 87.7
PH01000652G0570 Phyllostachys edulis HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1301.2 765 87.7
Solyc08g016050.2 Solanum lycopersicum HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1298.9 928 75.2
MisinT565900 Miscanthus sinensis HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1288.5 748 88.5
Ma10_g13030 Musa acuminata HOM04x5M003029 ORTHO04x5M004024 0.0e+00 1237.2 773 79.9
PH01000652G0600 Phyllostachys edulis HOM04x5M003029 ORTHO04x5M004024 9.3e-290 1000.0 668 75.4
PH01001292G0240 Phyllostachys edulis HOM04x5M003029 ORTHO04x5M004024 5.9e-284 980.7 717 71.5
Zm00008a001376 Zea mays PH207 HOM04x5M003029 ORTHO04x5M004024 5.5e-282 974.2 721 69.5
PAB00017992 Picea abies HOM04x5M003029 ORTHO04x5M004024 1.1e-274 949.9 671 69.3
Zm00008a035389 Zea mays PH207 HOM04x5M003029 ORTHO04x5M004024 8.8e-264 913.7 623 74.8
Solyc08g016070.1 Solanum lycopersicum HOM04x5M003029 ORTHO04x5M004024 4.0e-240 835.1 595 70.1
Sspon.01G0038560-1B Saccharum spontaneum HOM04x5M003029 ORTHO04x5M004024 1.8e-229 799.7 682 63.6
PH01000652G0580 Phyllostachys edulis HOM04x5M003029 ORTHO04x5M004024 1.9e-181 640.2 422 77.3
Zm00007a00021094 Zea mays B104 HOM04x5M003029 ORTHO04x5M004024 5.3e-168 595.5 492 63.6
Zm00008a009119 Zea mays PH207 HOM04x5M003029 ORTHO04x5M004024 5.3e-136 489.2 474 55.9
Solyc08g016060.1 Solanum lycopersicum HOM04x5M003029 ORTHO04x5M004024 4.2e-133 479.6 256 90.6
Zm00007a00023331 Zea mays B104 HOM04x5M003029 ORTHO04x5M004024 1.8e-131 474.2 473 56.0
Zm00001d042645 Zea mays B73 HOM04x5M003029 ORTHO04x5M004024 2.4e-128 463.8 411 62.3
Zm00007a00045790 Zea mays B104 HOM04x5M003029 ORTHO04x5M004024 2.0e-119 434.1 390 59.7
Zm00007a00014183 Zea mays B104 HOM04x5M003029 ORTHO04x5M004024 1.4e-99 368.2 329 62.0
PEQU_26827 Phalaenopsis equestris HOM04x5M003029 ORTHO04x5M004024 1.5e-98 364.8 198 91.9
Zm00007a00030948 Zea mays B104 HOM04x5M003648 ORTHO04x5M004391 2.3e-86 324.3 375 49.9
Zm00007a00002560 Zea mays B104 HOM04x5M003029 ORTHO04x5M004024 1.9e-80 304.7 279 58.1
CALSI_Maker00043916 Calamus simplicifolius HOM04x5M003029 ORTHO04x5M004024 1.4e-75 288.5 381 49.6
PEQU_36567 Phalaenopsis equestris HOM04x5M003029 ORTHO04x5M004024 1.3e-73 282.0 263 57.4
Zm00001d012342 Zea mays B73 HOM04x5M003029 ORTHO04x5M004024 3.3e-69 267.3 242 60.7
Zm00007a00028576 Zea mays B104 HOM04x5M003604 ORTHO04x5M004196 7.6e-58 229.6 136 82.4
Zm00001d007025 Zea mays B73 HOM04x5M003604 ORTHO04x5M004196 1.7e-57 228.4 135 83.0
Zm00001d035539 Zea mays B73 HOM04x5M003029 ORTHO04x5M004024 1.6e-55 221.9 195 62.1
Zm00007a00005356 Zea mays B104 HOM04x5M003029 ORTHO04x5M005159 4.3e-45 187.2 140 70.7
Zm00001d046856 Zea mays B73 HOM04x5M003029 ORTHO04x5M005159 3.2e-40 171.0 133 69.2
Zm00001d024153 Zea mays B73 HOM04x5M003029 ORTHO04x5M004024 7.4e-37 159.8 242 42.1
Zm00007a00035832 Zea mays B104 HOM04x5M001215 ORTHO04x5M005159 3.2e-32 144.4 100 72.0
Zm00001d018368 Zea mays B73 HOM04x5M003604 ORTHO04x5M004196 5.5e-32 143.7 89 80.9
Zm00007a00046707 Zea mays B104 HOM04x5M001215 ORTHO04x5M005159 5.7e-29 133.7 90 74.4
Zm00001d038664 Zea mays B73 HOM04x5M001215 ORTHO04x5M005159 1.3e-28 132.5 90 74.4
Zm00001d007384 Zea mays B73 HOM04x5M001215 ORTHO04x5M005159 2.8e-28 131.3 79 81.0
Zm00001d035534 Zea mays B73 HOM04x5M005152 ORTHO04x5M005159 2.8e-28 131.3 143 55.9
Zm00007a00032087 Zea mays B104 HOM04x5M005152 ORTHO04x5M005159 2.8e-28 131.3 143 55.9
Zm00008a030763 Zea mays PH207 HOM04x5M000032 ORTHO04x5M000137 1.6e-26 125.6 72 81.9
Potri.004G000700 Populus trichocarpa HOM04x5M003029 ORTHO04x5M004024 8.5e-25 119.8 97 67.0
Zm00001d043638 Zea mays B73 HOM04x5M000032 ORTHO04x5M000137 7.7e-18 96.7 56 82.1
Misin03G175700 Miscanthus sinensis HOM04x5M003029 ORTHO04x5M110346 6.8e-14 83.6 61 70.5
Zm00007a00046930 Zea mays B104 HOM04x5M000036 ORTHO04x5M003599 2.6e-13 81.6 63 65.1
Zm00008a005322 Zea mays PH207 HOM04x5M000625 ORTHO04x5M003599 2.6e-13 81.6 60 65.0
Zm00001d029161 Zea mays B73 HOM04x5M000032 ORTHO04x5M000137 9.8e-13 79.7 57 66.7
Zm00007a00022503 Zea mays B104 HOM04x5M003029 ORTHO04x5M003599 9.8e-13 79.7 57 66.7
Zm00007a00010604 Zea mays B104 HOM04x5M000625 ORTHO04x5M011011 9.8e-13 79.7 57 66.7
Zm00007a00047984 Zea mays B104 HOM04x5M001205 ORTHO04x5M013399 1.7e-12 79.0 46 76.1
TraesCS5D02G127700 Triticum aestivum HOM04x5M003029 ORTHO04x5M022365 8.3e-12 76.6 84 54.8
Zm00007a00002566 Zea mays B104 HOM04x5M003648 ORTHO04x5M004391 4.1e-11 74.3 102 43.1
TraesCS5A02G195400 Triticum aestivum HOM04x5M003029 ORTHO04x5M022365 2.7e-10 71.6 86 53.5
TRITD3Av1G038650 Triticum turgidum HOM04x5M003029 ORTHO04x5M022365 1.9e-08 65.5 48 62.5
TRITD5Av1G137100 Triticum turgidum HOM04x5M003029 ORTHO04x5M221097 9.5e-08 63.2 46 58.7
Zm00008a004781 Zea mays PH207 HOM04x5M001205 ORTHO04x5M013399 8.0e-07 60.1 39 69.2

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (6 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (1 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (5 genes)
Triticum turgidum (4 genes)
Vitis vinifera (1 genes)
Zea mays B73 (14 genes)
Zea mays B104 (18 genes)
Zea mays PH207 (8 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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