Interactive Phylogenetics Module

Gene Id
CALSI_Maker00005878

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CALSI_Maker00005878 Calamus simplicifolius HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1510.0 736 100.0
p5.00_sc00006_p0154 Elaeis guineensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1432.9 731 94.5
Aco003438 Ananas comosus HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1365.5 734 89.0
evm.TU.AsparagusV1_07.3669.V1.1 Asparagus officinalis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1348.6 736 87.6
Ma02_g07730 Musa acuminata HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1337.0 734 87.6
Spipo4G0085100 Spirodela polyrhiza HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1293.9 734 84.2
Bradi1g29020 Brachypodium distachyon HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1291.6 734 83.4
Misin04G109200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1289.6 734 83.5
Sobic.002G112700 Sorghum bicolor HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1287.7 734 83.4
Misin03G098200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1285.4 734 83.4
Seita.2G110200 Setaria italica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1284.2 734 83.1
HORVU3Hr1G013640 Hordeum vulgare HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1278.5 736 82.7
Sspon.02G0020200-1A Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1275.0 733 83.1
PEQU_08732 Phalaenopsis equestris HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1274.6 734 82.4
Zm00008a008470 Zea mays PH207 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1273.8 734 82.4
TraesCS3B02G090300 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1271.5 736 82.2
TraesCS3A02G076400 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1271.1 736 82.2
OB07G13280 Oryza brachyantha HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1270.8 734 82.3
OsR498G0713585300.01 Oryza sativa ssp. indica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1269.2 734 82.2
LP027001 Lolium perenne HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1268.1 734 82.0
LOC_Os07g07260 Oryza sativa ssp. japonica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1268.1 734 82.0
TraesCS3D02G076500 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1265.0 736 82.1
Zosma8g00780 Zostera marina HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1254.2 695 85.5
Potri.001G087400 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1218.4 734 79.0
Potri.003G143700 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1203.7 734 78.6
GSVIVG01019608001 Vitis vinifera HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1203.0 735 78.5
Zm00001d005157 Zea mays B73 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1192.2 734 78.2
Sspon.02G0020200-3C Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1184.1 723 79.5
Solyc08g082830.2 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1180.2 734 76.6
ATR1098G082 Amborella trichopoda HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1170.6 692 80.1
ASH_gene8283 Apostasia shenzhenica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1168.7 659 85.0
TRITD3Av1G021090 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1159.1 736 76.8
AT1G55090 Arabidopsis thaliana HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1158.7 734 74.9
TRITD3Bv1G024720 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1157.9 736 76.6
gene17841 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 2.0e-291 1004.2 735 65.6
Mapoly0035s0052 Marchantia polymorpha HOM04x5M005046 ORTHO04x5M006164 1.3e-290 1001.5 737 65.4
gene29750 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 3.3e-289 996.9 735 64.5
MCO17G006 Micromonas commoda HOM04x5M005046 ORTHO04x5M006164 6.8e-271 936.0 700 62.4
Pp3c17_21910 Physcomitrium patens HOM04x5M005046 ORTHO04x5M006164 2.0e-262 907.9 669 64.7
gene12860 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 1.8e-255 884.8 697 60.8
gene4078 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 3.4e-254 880.6 697 60.4
Cre10.g435250 Chlamydomonas reinhardtii HOM04x5M005046 ORTHO04x5M006164 2.0e-238 828.2 783 54.3
Sspon.02G0020200-4D Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 7.2e-188 660.2 377 81.7
PH01002232G0290 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 9.2e-183 643.3 407 75.9
PH01002232G0310 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.0e-178 629.8 357 84.9
PAB00015820 Picea abies HOM04x5M005046 ORTHO04x5M006164 4.1e-175 617.8 416 73.1
Oropetium_20150105_11453 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 1.4e-159 566.2 321 81.3
Oropetium_20150105_11454 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 1.5e-153 546.2 317 83.9
Zm00007a00049707 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 5.3e-138 494.6 332 75.3
Zm00007a00051183 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 2.1e-126 456.1 264 81.1
PH01000031G0760 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 4.0e-122 441.8 277 79.4
Sspon.02G0020200-2B Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 1.7e-99 366.7 199 88.9
Zjn_sc00077.1.g00130.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 8.0e-54 214.9 241 49.0
PH01000031G0750 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 7.3e-47 191.8 118 78.0
Pgl_GLEAN_10033649 Cenchrus americanus HOM04x5M005046 ORTHO04x5M006164 3.2e-26 123.2 66 80.3
evm.TU.AsparagusV1_05.1844.V1.1 Asparagus officinalis HOM04x5M001700 ORTHO04x5M004467 1.1e-23 114.8 66 78.8
Solyc06g071240.1 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 3.8e-19 99.8 127 48.0
PAB00013173 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.4e-18 97.8 65 66.2
Zjn_sc00077.1.g00140.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 2.3e-16 90.5 77 61.0

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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