Interactive Phylogenetics Module

Gene Id
Bradi4g23450

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Bradi4g23450 Brachypodium distachyon HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1913.7 974 100.0
TraesCS4D02G095400 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1742.2 980 90.1
TraesCS4A02G221400 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1734.5 980 89.9
TraesCSU02G067800 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1729.1 980 89.4
LP037827 Lolium perenne HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1664.4 979 87.5
OB11G14440 Oryza brachyantha HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1628.2 982 84.2
Sspon.05G0017710-1P Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1615.9 979 83.4
Sobic.005G068700 Sorghum bicolor HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1613.6 981 83.7
LOC_Os11g08670 Oryza sativa ssp. japonica HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1607.8 983 84.1
Sspon.05G0017710-3C Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1582.8 965 83.1
Zm00001d053076 Zea mays B73 HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1578.1 981 82.4
Seita.8G063000 Setaria italica HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1573.5 982 81.8
Zm00001d004716 Zea mays B73 HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1570.1 981 81.5
Sspon.05G0017710-2B Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1540.4 967 81.2
Pgl_GLEAN_10005493 Cenchrus americanus HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1531.2 921 84.1
Zm00007a00013125 Zea mays B104 HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1530.4 981 80.0
Oropetium_20150105_14831 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1481.1 982 78.2
PH01000665G0670 Phyllostachys edulis HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1408.3 816 87.6
Zm00008a008128 Zea mays PH207 HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1396.7 950 76.5
OsR498G1119545300.01 Oryza sativa ssp. indica HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1390.9 979 75.2
TRITD4Av1G165700 Triticum turgidum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1384.4 928 78.3
Zm00008a018194 Zea mays PH207 HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1371.3 880 80.7
Zm00007a00001551 Zea mays B104 HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1361.3 895 79.3
HORVU4Hr1G017680 Hordeum vulgare HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1232.6 730 87.1
Ma02_g22590 Musa acuminata HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1209.1 1005 63.2
p5.00_sc00045_p0119 Elaeis guineensis HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1187.9 971 64.3
Sspon.05G0017710-4D Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1182.2 912 69.3
CALSI_Maker00047652 Calamus simplicifolius HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1177.5 954 64.3
evm.TU.AsparagusV1_09.225.V1.1 Asparagus officinalis HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1159.8 1001 61.3
Potri.005G182600 Populus trichocarpa HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1110.5 943 62.8
ATR0584G287 Amborella trichopoda HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1095.5 964 61.8
Zosma345g00120 Zostera marina HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1090.1 946 60.4
PEQU_06829 Phalaenopsis equestris HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1085.5 929 61.8
AT1G21640 Arabidopsis thaliana HOM04x5M001618 ORTHO04x5M006677 0.0e+00 1081.6 954 60.1
Potri.002G078700 Populus trichocarpa HOM04x5M001618 ORTHO04x5M006677 2.5e-305 1050.8 909 62.4
Aco003286 Ananas comosus HOM04x5M001618 ORTHO04x5M006677 3.6e-304 1047.0 858 63.6
ASH_gene10346 Apostasia shenzhenica HOM04x5M001618 ORTHO04x5M006677 4.5e-262 907.1 855 58.0
Solyc11g005100.1 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M006677 1.0e-261 906.0 945 53.7
Spipo13G0012600 Spirodela polyrhiza HOM04x5M001618 ORTHO04x5M006677 2.1e-259 898.3 848 55.9
Mapoly0020s0027 Marchantia polymorpha HOM04x5M001618 ORTHO04x5M006677 1.5e-244 849.0 982 49.9
GSVIVG01008810001 Vitis vinifera HOM04x5M001618 ORTHO04x5M006677 3.4e-241 837.8 937 52.1
Pp3c18_2030 Physcomitrium patens HOM04x5M001618 ORTHO04x5M006677 4.8e-240 833.9 931 51.3
gene22987 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M006677 4.4e-233 810.8 903 50.9
PAB00015832 Picea abies HOM04x5M001618 ORTHO04x5M006677 6.6e-221 770.4 860 51.2
Sspon.05G0017710-1A Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 3.1e-202 708.4 686 59.3
Solyc06g060060.2 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M006677 3.9e-181 638.3 341 90.0
Zjn_sc00140.1.g00250.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001618 ORTHO04x5M006677 1.7e-136 490.0 970 36.8
Cre07.g322950 Chlamydomonas reinhardtii HOM04x5M001618 ORTHO04x5M006677 3.7e-115 419.1 374 53.5
MCO06G214 Micromonas commoda HOM04x5M001618 ORTHO04x5M006677 1.6e-102 377.1 959 31.5
Spipo3G0061100 Spirodela polyrhiza HOM04x5M001618 ORTHO04x5M004034 3.2e-74 283.1 323 45.5
TraesCS4D02G078400 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 7.1e-74 282.0 347 49.0
PEQU_08693 Phalaenopsis equestris HOM04x5M001618 ORTHO04x5M004034 1.6e-73 280.8 372 41.9
GSVIVG01025236001 Vitis vinifera HOM04x5M001618 ORTHO04x5M004034 3.9e-72 276.2 324 45.7
AT3G21070 Arabidopsis thaliana HOM04x5M001618 ORTHO04x5M004034 1.1e-71 274.6 325 44.6
Solyc01g008560.2 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M004034 1.9e-71 273.9 366 41.3
evm.TU.AsparagusV1_05.10.V1.1 Asparagus officinalis HOM04x5M001618 ORTHO04x5M004034 2.5e-71 273.5 323 44.9
p5.00_sc00032_p0031 Elaeis guineensis HOM04x5M001618 ORTHO04x5M004034 2.5e-71 273.5 323 45.2
Misin16G127800 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 3.3e-71 273.1 323 45.2
Sobic.003G432100 Sorghum bicolor HOM04x5M001618 ORTHO04x5M004034 3.3e-71 273.1 323 45.5
ASH_gene4403 Apostasia shenzhenica HOM04x5M001618 ORTHO04x5M004034 4.3e-71 272.7 380 40.0
ATR0730G209 Amborella trichopoda HOM04x5M001618 ORTHO04x5M004034 5.6e-71 272.3 323 45.2
LP029633 Lolium perenne HOM04x5M001618 ORTHO04x5M004034 5.6e-71 272.3 323 45.5
Potri.001G256100 Populus trichocarpa HOM04x5M001618 ORTHO04x5M004034 7.3e-71 271.9 323 43.7
Sspon.07G0024180-3D Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 7.3e-71 271.9 323 45.2
Misin17G127500 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 9.6e-71 271.6 323 44.9
Pp3c6_3660 Physcomitrium patens HOM04x5M001618 ORTHO04x5M004034 9.6e-71 271.6 326 44.8
Pp3c25_12850 Physcomitrium patens HOM04x5M001618 ORTHO04x5M004034 1.6e-70 270.8 326 44.2
Potri.009G051500 Populus trichocarpa HOM04x5M001618 ORTHO04x5M004034 2.1e-70 270.4 323 44.3
TraesCS1A02G242500 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 2.1e-70 270.4 323 45.5
TRITD1Av1G156360 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 2.1e-70 270.4 323 45.5
Oropetium_20150105_09983 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M004034 2.8e-70 270.0 323 45.2
Sspon.03G0026220-1B Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 2.8e-70 270.0 323 44.9
Zm00001d011835 Zea mays B73 HOM04x5M001618 ORTHO04x5M004034 2.8e-70 270.0 323 44.9
Zm00007a00000329 Zea mays B104 HOM04x5M001618 ORTHO04x5M004034 2.8e-70 270.0 323 44.9
Seita.3G258400 Setaria italica HOM04x5M001618 ORTHO04x5M004034 6.2e-70 268.9 323 45.2
HORVU1Hr1G056560 Hordeum vulgare HOM04x5M001618 ORTHO04x5M004034 8.1e-70 268.5 323 45.2
Seita.5G458100 Setaria italica HOM04x5M001618 ORTHO04x5M004034 8.1e-70 268.5 325 44.3
TraesCS1B02G253900 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 1.1e-69 268.1 323 45.2
TRITD1Bv1G142840 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 1.1e-69 268.1 323 45.2
Misin06G396400 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 1.4e-69 267.7 323 44.9
Pp3c10_23020 Physcomitrium patens HOM04x5M001618 ORTHO04x5M004034 1.4e-69 267.7 328 43.6
LOC_Os05g32210 Oryza sativa ssp. japonica HOM04x5M001618 ORTHO04x5M004034 1.8e-69 267.3 323 45.2
OsR498G0510758700.01 Oryza sativa ssp. indica HOM04x5M001618 ORTHO04x5M004034 1.8e-69 267.3 323 45.2
TraesCS1D02G242400 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 2.4e-69 266.9 323 44.9
CALSI_Maker00004395 Calamus simplicifolius HOM04x5M001618 ORTHO04x5M004034 4.0e-69 266.2 337 43.6
Misin05G390400 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 5.3e-69 265.8 323 44.9
LOC_Os01g72690 Oryza sativa ssp. japonica HOM04x5M001618 ORTHO04x5M004034 5.3e-69 265.8 323 44.6
OsR498G0102730700.01 Oryza sativa ssp. indica HOM04x5M001618 ORTHO04x5M004034 5.3e-69 265.8 323 44.6
Ma03_g08490 Musa acuminata HOM04x5M001618 ORTHO04x5M004034 9.0e-69 265.0 323 44.3
Mapoly0052s0071 Marchantia polymorpha HOM04x5M001618 ORTHO04x5M004034 9.0e-69 265.0 326 44.5
Zm00008a032471 Zea mays PH207 HOM04x5M001618 ORTHO04x5M004034 1.2e-68 264.6 333 43.5
OB05G22900 Oryza brachyantha HOM04x5M001618 ORTHO04x5M004034 1.5e-68 264.2 323 44.0
LP013568 Lolium perenne HOM04x5M001618 ORTHO04x5M004034 2.6e-68 263.5 326 44.8
OB01G53530 Oryza brachyantha HOM04x5M001618 ORTHO04x5M004034 4.5e-68 262.7 323 44.3
gene5351 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 5.8e-68 262.3 322 43.2
TraesCS3D02G502500 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 7.6e-68 261.9 322 44.4
TRITD3Bv1G266910 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 9.9e-68 261.5 322 44.4
HORVU3Hr1G109740 Hordeum vulgare HOM04x5M001618 ORTHO04x5M004034 1.3e-67 261.2 322 44.4
gene2296 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 1.7e-67 260.8 337 41.8
TraesCS3A02G495300 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 2.2e-67 260.4 322 44.4
TRITD3Av1G272060 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 2.2e-67 260.4 322 44.4
Zm00007a00006840 Zea mays B104 HOM04x5M001618 ORTHO04x5M004034 3.8e-67 259.6 345 42.0
Bradi2g61240 Brachypodium distachyon HOM04x5M001618 ORTHO04x5M004034 1.4e-66 257.7 323 43.3
gene15913 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 2.4e-66 256.9 316 43.7
gene3597 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 2.4e-66 256.9 316 43.7
Sobic.009G123700 Sorghum bicolor HOM04x5M001618 ORTHO04x5M004034 7.1e-66 255.4 322 44.1
Zosma2g00280 Zostera marina HOM04x5M001618 ORTHO04x5M004034 2.1e-65 253.8 327 42.2
Zm00008a012695 Zea mays PH207 HOM04x5M001618 ORTHO04x5M004034 2.3e-64 250.4 358 40.2
MCO05G005 Micromonas commoda HOM04x5M001618 ORTHO04x5M004034 1.6e-62 244.2 306 42.8
Cre12.g560600 Chlamydomonas reinhardtii HOM04x5M001618 ORTHO04x5M082826 5.1e-56 222.6 298 43.6
Aco006301 Ananas comosus HOM04x5M001618 ORTHO04x5M004034 9.6e-55 218.4 324 40.1
Oropetium_20150105_05218 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M004034 4.8e-54 216.1 323 39.3
Zm00007a00001553 Zea mays B104 HOM04x5M001618 ORTHO04x5M006677 5.3e-53 212.6 102 97.1
Zm00008a018196 Zea mays PH207 HOM04x5M001618 ORTHO04x5M006677 5.3e-53 212.6 102 97.1
Pgl_GLEAN_10003715 Cenchrus americanus HOM04x5M001618 ORTHO04x5M004034 6.5e-51 205.7 320 38.1
Pgl_GLEAN_10027066 Cenchrus americanus HOM04x5M001618 ORTHO04x5M004034 1.4e-50 204.5 323 37.2
Cre10.g431650 Chlamydomonas reinhardtii HOM04x5M001618 ORTHO04x5M006677 5.1e-48 196.1 319 35.4
PH01000058G1390 Phyllostachys edulis HOM04x5M001618 ORTHO04x5M004034 1.5e-44 184.5 199 48.2
TRITD4Bv1G027040 Triticum turgidum HOM04x5M001618 ORTHO04x5M006677 4.5e-44 183.0 95 87.4
PAB00007573 Picea abies HOM04x5M001618 ORTHO04x5M006677 7.6e-44 182.2 92 87.0
Sspon.07G0024180-2C Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 1.9e-42 177.6 152 55.3
PAB00029574 Picea abies HOM04x5M001618 ORTHO04x5M004034 7.9e-33 145.6 158 48.7
Oropetium_20150105_27239 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M004034 2.9e-27 127.1 251 33.5
Zjn_sc00034.1.g00890.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001618 ORTHO04x5M004034 4.2e-26 123.2 320 29.4
Sspon.03G0026220-2C Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 1.1e-21 108.6 94 54.3
Solyc00g017910.1 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M202081 5.9e-20 102.8 180 31.1
Zjn_sc00009.1.g00720.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001618 ORTHO04x5M004034 4.2e-18 96.7 153 38.6
LP031802 Lolium perenne HOM04x5M001618 ORTHO04x5M001710 6.7e-16 89.4 98 51.0
PAB00062977 Picea abies HOM04x5M001618 ORTHO04x5M004034 2.6e-15 87.4 88 52.3
LOC_Os11g08590 Oryza sativa ssp. japonica HOM04x5M001618 ORTHO04x5M025953 2.2e-11 74.3 49 73.5

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (3 genes)
Lolium perenne (4 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (4 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (4 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (4 genes)
Picea abies (4 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (9 genes)
Selaginella moellendorffii (5 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (2 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (5 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (3 genes)