Interactive Phylogenetics Module

Gene Id
Bradi4g05710

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Bradi4g05710 Brachypodium distachyon HOM04x5M004163 ORTHO04x5M007218 0.0e+00 1130.2 613 100.0
TraesCS5B02G101300 Triticum aestivum HOM04x5M004163 ORTHO04x5M007218 1.7e-299 1030.8 613 91.5
TRITD5Bv1G048250 Triticum turgidum HOM04x5M004163 ORTHO04x5M007218 1.4e-298 1027.7 613 91.4
LP005885 Lolium perenne HOM04x5M004163 ORTHO04x5M007218 1.2e-297 1024.6 622 90.7
TraesCS5D02G107800 Triticum aestivum HOM04x5M004163 ORTHO04x5M007218 3.3e-295 1016.5 613 90.4
TraesCS5A02G095100 Triticum aestivum HOM04x5M004163 ORTHO04x5M007218 9.6e-295 1015.0 621 89.9
TRITD5Av1G052480 Triticum turgidum HOM04x5M004163 ORTHO04x5M007218 9.6e-295 1015.0 621 89.9
HORVU5Hr1G025740 Hordeum vulgare HOM04x5M004163 ORTHO04x5M007218 1.4e-293 1011.1 621 89.2
OB12G21860 Oryza brachyantha HOM04x5M004163 ORTHO04x5M007218 1.9e-287 990.7 615 86.8
PH01001009G0200 Phyllostachys edulis HOM04x5M004163 ORTHO04x5M007218 3.1e-285 983.4 613 85.5
LOC_Os12g35290 Oryza sativa ssp. japonica HOM04x5M004163 ORTHO04x5M007218 1.6e-281 971.1 618 85.3
OsR498G1221772300.01 Oryza sativa ssp. indica HOM04x5M004163 ORTHO04x5M007218 1.6e-281 971.1 618 85.3
Oropetium_20150105_24110 Oropetium thomaeum HOM04x5M004163 ORTHO04x5M007218 7.9e-281 968.8 612 84.6
Seita.3G344900 Setaria italica HOM04x5M004163 ORTHO04x5M007218 1.1e-279 964.9 612 86.3
Misin02G448300 Miscanthus sinensis HOM04x5M004163 ORTHO04x5M007218 6.5e-275 949.1 613 80.1
Sspon.01G0005020-1A Saccharum spontaneum HOM04x5M004163 ORTHO04x5M007218 6.7e-272 939.1 613 84.0
Sspon.01G0005020-3D Saccharum spontaneum HOM04x5M004163 ORTHO04x5M007218 5.7e-271 936.0 613 84.2
Sobic.001G474400 Sorghum bicolor HOM04x5M004163 ORTHO04x5M007218 1.4e-269 931.4 610 82.3
Zm00001d048217 Zea mays B73 HOM04x5M004163 ORTHO04x5M007218 2.0e-268 927.5 613 80.1
Zm00008a000605 Zea mays PH207 HOM04x5M004163 ORTHO04x5M007218 1.0e-267 925.2 610 81.8
Zm00001d028010 Zea mays B73 HOM04x5M004163 ORTHO04x5M007218 5.0e-267 922.9 599 83.1
Zm00007a00048341 Zea mays B104 HOM04x5M004163 ORTHO04x5M007218 5.0e-267 922.9 599 83.1
PH01000674G0260 Phyllostachys edulis HOM04x5M004163 ORTHO04x5M007218 1.1e-266 921.8 577 82.3
Zm00007a00005660 Zea mays B104 HOM04x5M004163 ORTHO04x5M007218 1.1e-266 921.8 613 79.8
Pgl_GLEAN_10032527 Cenchrus americanus HOM04x5M004163 ORTHO04x5M007218 5.3e-261 902.9 560 87.3
Aco005889 Ananas comosus HOM04x5M004163 ORTHO04x5M007218 7.7e-252 872.5 597 73.7
evm.TU.AsparagusV1_Unassigned.783.V1.1 Asparagus officinalis HOM04x5M004163 ORTHO04x5M007218 2.7e-249 864.0 498 84.3
CALSI_Maker00002203 Calamus simplicifolius HOM04x5M004163 ORTHO04x5M007218 6.8e-248 859.4 585 75.0
CALSI_Maker00004382 Calamus simplicifolius HOM04x5M004163 ORTHO04x5M007218 6.8e-248 859.4 585 75.0
p5.00_sc00018_p0193 Elaeis guineensis HOM04x5M004163 ORTHO04x5M007218 9.8e-247 855.5 518 80.5
Misin01G454000 Miscanthus sinensis HOM04x5M004163 ORTHO04x5M007218 5.9e-244 846.3 544 83.3
ASH_gene10528 Apostasia shenzhenica HOM04x5M004163 ORTHO04x5M007218 5.0e-243 843.2 517 79.9
Ma07_g25440 Musa acuminata HOM04x5M004163 ORTHO04x5M007218 1.4e-240 835.1 509 80.0
PEQU_00877 Phalaenopsis equestris HOM04x5M004163 ORTHO04x5M007218 3.0e-235 817.4 508 78.1
Zjn_sc00038.1.g01460.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004163 ORTHO04x5M007218 3.3e-234 813.9 612 75.2
Potri.006G225500 Populus trichocarpa HOM04x5M004163 ORTHO04x5M007218 1.3e-227 792.0 515 74.4
GSVIVG01035413001 Vitis vinifera HOM04x5M004163 ORTHO04x5M007218 4.7e-225 783.5 496 76.0
Zosma292g00220 Zostera marina HOM04x5M004163 ORTHO04x5M007218 6.2e-225 783.1 501 75.8
Solyc01g087650.2 Solanum lycopersicum HOM04x5M004163 ORTHO04x5M007218 2.2e-222 774.6 501 75.2
Sspon.01G0005020-2B Saccharum spontaneum HOM04x5M004163 ORTHO04x5M007218 3.7e-222 773.9 613 73.4
Spipo21G0022900 Spirodela polyrhiza HOM04x5M004163 ORTHO04x5M007218 1.4e-221 771.9 499 75.4
ATR0686G037 Amborella trichopoda HOM04x5M004163 ORTHO04x5M007218 4.7e-217 756.9 507 72.8
AT5G11980 Arabidopsis thaliana HOM04x5M004163 ORTHO04x5M007218 4.3e-210 733.8 462 76.2
Zm00008a035954 Zea mays PH207 HOM04x5M004163 ORTHO04x5M007218 1.4e-197 692.2 457 79.2
Mapoly0087s0038 Marchantia polymorpha HOM04x5M004163 ORTHO04x5M007218 2.5e-186 654.8 479 66.6
Pp3c10_11790 Physcomitrium patens HOM04x5M004163 ORTHO04x5M007218 4.0e-184 647.5 516 61.8
gene8752 Selaginella moellendorffii HOM04x5M004163 ORTHO04x5M007218 2.7e-172 608.2 490 60.8
gene4235 Selaginella moellendorffii HOM04x5M004163 ORTHO04x5M007218 5.1e-171 604.0 490 60.6
Pp3c2_14420 Physcomitrium patens HOM04x5M004163 ORTHO04x5M007218 1.5e-149 532.7 387 65.4
PAB00042203 Picea abies HOM04x5M004163 ORTHO04x5M007218 1.4e-131 473.0 362 63.8
Ma03_g33650 Musa acuminata HOM04x5M004163 ORTHO04x5M007218 4.9e-105 384.8 377 57.6
Cre10.g439650 Chlamydomonas reinhardtii HOM04x5M004163 ORTHO04x5M007218 1.2e-92 343.6 543 36.8
MCO04G241 Micromonas commoda HOM04x5M004163 ORTHO04x5M007218 1.5e-82 310.1 444 39.2
Zm00001d028871 Zea mays B73 HOM04x5M004163 ORTHO04x5M013611 4.5e-34 149.1 106 78.3
Zm00001d006805 Zea mays B73 HOM04x5M004163 ORTHO04x5M013611 4.5e-34 149.1 106 78.3
Zm00001d053677 Zea mays B73 HOM04x5M004163 ORTHO04x5M013611 4.5e-34 149.1 106 78.3
Zm00008a039726 Zea mays PH207 HOM04x5M004163 ORTHO04x5M013611 5.9e-34 148.7 115 72.2
Zm00007a00013703 Zea mays B104 HOM04x5M004163 ORTHO04x5M013611 7.7e-34 148.3 116 73.3
Zm00007a00010507 Zea mays B104 HOM04x5M004163 ORTHO04x5M013611 7.7e-34 148.3 116 73.3
Zm00007a00032059 Zea mays B104 HOM04x5M004163 ORTHO04x5M013611 7.7e-34 148.3 116 73.3
Zjn_sc00113.1.g00840.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004163 ORTHO04x5M013611 1.5e-32 144.1 103 79.6
PAB00037879 Picea abies HOM04x5M004163 ORTHO04x5M013611 3.4e-21 106.3 76 68.4
Ma03_g33660 Musa acuminata HOM04x5M004163 ORTHO04x5M094510 7.3e-08 62.0 40 65.0
ATR0009G028 Amborella trichopoda HOM04x5M004163 ORTHO04x5M054620 5.2e-06 55.8 44 54.5
ATR0009G024 Amborella trichopoda HOM04x5M004163 ORTHO04x5M052132 8.9e-06 55.1 64 43.8

Amborella trichopoda (3 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings