Interactive Phylogenetics Module

Gene Id
Bradi2g61240

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Bradi2g61240 Brachypodium distachyon HOM04x5M001618 ORTHO04x5M004034 0.0e+00 1151.3 574 100.0
TRITD3Bv1G266910 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 5.9e-294 1012.3 573 88.3
TraesCS3D02G502500 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 1.6e-291 1004.2 573 87.4
HORVU3Hr1G109740 Hordeum vulgare HOM04x5M001618 ORTHO04x5M004034 1.6e-288 994.2 566 87.6
TRITD3Av1G272060 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 4.1e-287 989.6 557 88.7
LP013568 Lolium perenne HOM04x5M001618 ORTHO04x5M004034 1.0e-285 984.9 553 89.0
OB01G53530 Oryza brachyantha HOM04x5M001618 ORTHO04x5M004034 2.9e-285 983.4 568 87.0
Seita.5G458100 Setaria italica HOM04x5M001618 ORTHO04x5M004034 3.6e-283 976.5 561 87.3
OsR498G0102730700.01 Oryza sativa ssp. indica HOM04x5M001618 ORTHO04x5M004034 1.4e-282 974.5 570 86.3
Oropetium_20150105_09983 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M004034 2.2e-280 967.2 561 85.7
Sobic.003G432100 Sorghum bicolor HOM04x5M001618 ORTHO04x5M004034 1.4e-274 948.0 559 84.6
TraesCS3A02G495300 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 5.2e-274 946.0 522 89.5
Zm00001d011835 Zea mays B73 HOM04x5M001618 ORTHO04x5M004034 1.3e-272 941.4 559 83.2
Zm00007a00000329 Zea mays B104 HOM04x5M001618 ORTHO04x5M004034 1.3e-272 941.4 559 83.2
LOC_Os01g72690 Oryza sativa ssp. japonica HOM04x5M001618 ORTHO04x5M004034 2.9e-269 930.2 528 87.9
Misin06G396400 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 6.1e-267 922.5 559 82.8
Zm00007a00006840 Zea mays B104 HOM04x5M001618 ORTHO04x5M004034 1.4e-266 921.4 581 79.7
Zm00008a032471 Zea mays PH207 HOM04x5M001618 ORTHO04x5M004034 1.8e-266 921.0 569 81.2
Sspon.03G0026220-1B Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 2.6e-265 917.1 559 82.5
Zm00008a012695 Zea mays PH207 HOM04x5M001618 ORTHO04x5M004034 4.8e-264 912.9 594 77.6
Misin05G390400 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 4.2e-260 899.8 526 84.6
Pgl_GLEAN_10027066 Cenchrus americanus HOM04x5M001618 ORTHO04x5M004034 1.2e-241 838.6 563 77.8
LP029633 Lolium perenne HOM04x5M001618 ORTHO04x5M004034 1.7e-237 824.7 522 78.0
HORVU1Hr1G056560 Hordeum vulgare HOM04x5M001618 ORTHO04x5M004034 3.0e-237 823.9 519 78.4
TRITD1Av1G156360 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 8.6e-237 822.4 517 78.5
TraesCS1A02G242500 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 9.5e-236 818.9 517 78.3
TraesCS1B02G253900 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 2.1e-235 817.8 519 78.0
Seita.3G258400 Setaria italica HOM04x5M001618 ORTHO04x5M004034 2.8e-235 817.4 522 77.4
TraesCS1D02G242400 Triticum aestivum HOM04x5M001618 ORTHO04x5M004034 1.8e-234 814.7 519 77.6
TRITD1Bv1G142840 Triticum turgidum HOM04x5M001618 ORTHO04x5M004034 1.8e-234 814.7 519 77.8
Misin16G127800 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 3.4e-233 810.4 524 76.7
OB05G22900 Oryza brachyantha HOM04x5M001618 ORTHO04x5M004034 3.7e-232 807.0 505 78.8
Sspon.07G0024180-3D Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 6.4e-232 806.2 524 76.3
OsR498G0510758700.01 Oryza sativa ssp. indica HOM04x5M001618 ORTHO04x5M004034 1.4e-231 805.1 513 78.8
LOC_Os05g32210 Oryza sativa ssp. japonica HOM04x5M001618 ORTHO04x5M004034 4.1e-231 803.5 491 80.9
Misin17G127500 Miscanthus sinensis HOM04x5M001618 ORTHO04x5M004034 5.4e-231 803.1 524 76.1
p5.00_sc00032_p0031 Elaeis guineensis HOM04x5M001618 ORTHO04x5M004034 6.0e-222 773.1 526 73.8
Sobic.009G123700 Sorghum bicolor HOM04x5M001618 ORTHO04x5M004034 4.9e-216 753.4 524 72.7
Ma03_g08490 Musa acuminata HOM04x5M001618 ORTHO04x5M004034 9.2e-215 749.2 537 70.2
evm.TU.AsparagusV1_05.10.V1.1 Asparagus officinalis HOM04x5M001618 ORTHO04x5M004034 3.3e-212 740.7 503 72.4
PEQU_08693 Phalaenopsis equestris HOM04x5M001618 ORTHO04x5M004034 8.4e-208 726.1 530 70.2
Oropetium_20150105_05218 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M004034 2.4e-207 724.5 528 71.0
Zjn_sc00034.1.g00890.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001618 ORTHO04x5M004034 4.2e-207 723.8 526 71.3
ASH_gene4403 Apostasia shenzhenica HOM04x5M001618 ORTHO04x5M004034 2.7e-206 721.1 534 67.6
ATR0730G209 Amborella trichopoda HOM04x5M001618 ORTHO04x5M004034 3.6e-203 710.7 521 68.1
Potri.009G051500 Populus trichocarpa HOM04x5M001618 ORTHO04x5M004034 9.0e-202 706.1 518 68.5
Pgl_GLEAN_10003715 Cenchrus americanus HOM04x5M001618 ORTHO04x5M004034 3.4e-201 704.1 522 69.3
Potri.001G256100 Populus trichocarpa HOM04x5M001618 ORTHO04x5M004034 7.6e-201 703.0 505 68.5
Solyc01g008560.2 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M004034 1.8e-197 691.8 517 66.7
Aco006301 Ananas comosus HOM04x5M001618 ORTHO04x5M004034 1.1e-194 682.6 528 65.7
GSVIVG01025236001 Vitis vinifera HOM04x5M001618 ORTHO04x5M004034 6.9e-194 679.9 558 62.9
CALSI_Maker00004395 Calamus simplicifolius HOM04x5M001618 ORTHO04x5M004034 5.8e-193 676.8 542 66.4
Spipo3G0061100 Spirodela polyrhiza HOM04x5M001618 ORTHO04x5M004034 4.6e-190 667.2 469 69.9
AT3G21070 Arabidopsis thaliana HOM04x5M001618 ORTHO04x5M004034 1.5e-188 662.1 498 67.9
Zjn_sc00009.1.g00720.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001618 ORTHO04x5M004034 6.7e-181 636.7 388 83.5
Zosma2g00280 Zostera marina HOM04x5M001618 ORTHO04x5M004034 1.1e-172 609.4 481 64.4
Mapoly0052s0071 Marchantia polymorpha HOM04x5M001618 ORTHO04x5M004034 4.2e-167 590.9 565 54.7
Pp3c25_12850 Physcomitrium patens HOM04x5M001618 ORTHO04x5M004034 1.7e-155 552.4 517 55.9
Pp3c6_3660 Physcomitrium patens HOM04x5M001618 ORTHO04x5M004034 7.0e-154 547.0 592 51.7
Oropetium_20150105_27239 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M004034 3.8e-152 541.2 521 58.3
Sspon.03G0026220-2C Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 9.4e-143 510.0 559 53.8
gene15913 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 2.6e-140 501.9 465 56.6
gene3597 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 2.2e-139 498.8 495 54.1
Sspon.07G0024180-2C Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 1.3e-131 473.0 463 56.8
Pp3c10_23020 Physcomitrium patens HOM04x5M001618 ORTHO04x5M004034 2.0e-129 465.7 491 51.7
gene2296 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 2.0e-129 465.7 546 48.2
gene5351 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M004034 2.8e-126 455.3 356 61.5
Bradi2g26930 Brachypodium distachyon HOM04x5M001618 ORTHO04x5M004034 1.2e-110 403.3 306 68.0
PH01000058G1390 Phyllostachys edulis HOM04x5M001618 ORTHO04x5M004034 4.7e-110 401.4 204 93.6
PH01000058G1380 Phyllostachys edulis HOM04x5M001618 ORTHO04x5M004034 2.1e-105 386.0 239 84.5
Sspon.07G0024180-1B Saccharum spontaneum HOM04x5M001618 ORTHO04x5M004034 4.6e-105 384.8 293 67.2
PH01000058G1330 Phyllostachys edulis HOM04x5M001618 ORTHO04x5M004034 3.0e-104 382.1 239 84.5
Zm00001d042052 Zea mays B73 HOM04x5M001618 ORTHO04x5M004034 1.2e-92 343.6 237 75.5
Cre12.g560600 Chlamydomonas reinhardtii HOM04x5M001618 ORTHO04x5M082826 1.1e-71 273.9 292 49.0
evm.TU.AsparagusV1_09.225.V1.1 Asparagus officinalis HOM04x5M001618 ORTHO04x5M006677 5.7e-71 271.6 324 45.1
PEQU_06829 Phalaenopsis equestris HOM04x5M001618 ORTHO04x5M006677 9.6e-71 270.8 323 45.2
Potri.005G182600 Populus trichocarpa HOM04x5M001618 ORTHO04x5M006677 2.8e-70 269.2 324 44.4
CALSI_Maker00047652 Calamus simplicifolius HOM04x5M001618 ORTHO04x5M006677 6.2e-70 268.1 324 45.1
Zosma345g00120 Zostera marina HOM04x5M001618 ORTHO04x5M006677 1.1e-69 267.3 323 44.6
Potri.002G078700 Populus trichocarpa HOM04x5M001618 ORTHO04x5M006677 2.4e-69 266.2 324 44.1
AT1G21640 Arabidopsis thaliana HOM04x5M001618 ORTHO04x5M006677 3.1e-69 265.8 337 43.0
Pgl_GLEAN_10005493 Cenchrus americanus HOM04x5M001618 ORTHO04x5M006677 5.3e-69 265.0 323 44.0
Ma02_g22590 Musa acuminata HOM04x5M001618 ORTHO04x5M006677 5.3e-69 265.0 323 44.3
GSVIVG01008810001 Vitis vinifera HOM04x5M001618 ORTHO04x5M006677 5.3e-69 265.0 324 43.5
ATR0584G287 Amborella trichopoda HOM04x5M001618 ORTHO04x5M006677 6.9e-69 264.6 324 44.1
Solyc06g060060.2 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M006677 6.9e-69 264.6 324 43.5
p5.00_sc00045_p0119 Elaeis guineensis HOM04x5M001618 ORTHO04x5M006677 9.0e-69 264.2 324 44.4
LOC_Os11g08670 Oryza sativa ssp. japonica HOM04x5M001618 ORTHO04x5M006677 2.6e-68 262.7 323 44.0
OsR498G1119545300.01 Oryza sativa ssp. indica HOM04x5M001618 ORTHO04x5M006677 2.6e-68 262.7 323 44.0
Seita.8G063000 Setaria italica HOM04x5M001618 ORTHO04x5M006677 2.6e-68 262.7 323 43.7
MCO05G005 Micromonas commoda HOM04x5M001618 ORTHO04x5M004034 4.5e-68 261.9 322 43.2
TraesCSU02G067800 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 1.3e-67 260.4 323 43.7
TraesCS4D02G095400 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 1.3e-67 260.4 323 43.7
TraesCS4A02G221400 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 1.3e-67 260.4 323 43.7
LP037827 Lolium perenne HOM04x5M001618 ORTHO04x5M006677 1.7e-67 260.0 323 43.7
Pp3c18_2030 Physcomitrium patens HOM04x5M001618 ORTHO04x5M006677 1.7e-67 260.0 320 43.4
Sobic.005G068700 Sorghum bicolor HOM04x5M001618 ORTHO04x5M006677 1.7e-67 260.0 323 43.7
Zm00001d004716 Zea mays B73 HOM04x5M001618 ORTHO04x5M006677 1.7e-67 260.0 323 43.3
Zm00007a00013125 Zea mays B104 HOM04x5M001618 ORTHO04x5M006677 1.7e-67 260.0 323 43.3
Sspon.05G0017710-1P Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 2.2e-67 259.6 323 43.7
OB11G14440 Oryza brachyantha HOM04x5M001618 ORTHO04x5M006677 3.8e-67 258.8 512 34.4
Zm00001d053076 Zea mays B73 HOM04x5M001618 ORTHO04x5M006677 3.8e-67 258.8 323 43.3
Bradi4g23450 Brachypodium distachyon HOM04x5M001618 ORTHO04x5M006677 8.4e-67 257.7 323 43.3
Mapoly0020s0027 Marchantia polymorpha HOM04x5M001618 ORTHO04x5M006677 1.1e-66 257.3 325 42.5
Zm00008a008128 Zea mays PH207 HOM04x5M001618 ORTHO04x5M006677 1.4e-66 256.9 334 43.1
gene22987 Selaginella moellendorffii HOM04x5M001618 ORTHO04x5M006677 6.1e-65 251.5 323 42.1
Sspon.05G0017710-2B Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 6.1e-65 251.5 315 43.5
Sspon.05G0017710-3C Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 7.9e-65 251.1 311 43.7
TRITD4Av1G165700 Triticum turgidum HOM04x5M001618 ORTHO04x5M006677 5.7e-63 245.0 287 45.3
PAB00029574 Picea abies HOM04x5M001618 ORTHO04x5M004034 1.3e-62 243.8 148 76.4
Solyc11g005100.1 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M006677 1.1e-61 240.7 342 39.2
Cre07.g322950 Chlamydomonas reinhardtii HOM04x5M001618 ORTHO04x5M006677 4.1e-61 238.8 354 39.5
MCO06G214 Micromonas commoda HOM04x5M001618 ORTHO04x5M006677 5.5e-58 228.4 253 45.8
Oropetium_20150105_14831 Oropetium thomaeum HOM04x5M001618 ORTHO04x5M006677 2.3e-56 223.0 323 39.3
Aco003286 Ananas comosus HOM04x5M001618 ORTHO04x5M006677 3.1e-53 212.6 261 44.1
ASH_gene10346 Apostasia shenzhenica HOM04x5M001618 ORTHO04x5M006677 6.9e-53 211.5 261 45.6
Cre10.g431650 Chlamydomonas reinhardtii HOM04x5M001618 ORTHO04x5M006677 7.7e-52 208.0 337 39.2
PAB00017001 Picea abies HOM04x5M001618 ORTHO04x5M004034 1.8e-40 170.2 200 49.5
Spipo13G0012600 Spirodela polyrhiza HOM04x5M001618 ORTHO04x5M006677 7.7e-36 154.8 237 37.1
PH01000665G0670 Phyllostachys edulis HOM04x5M001618 ORTHO04x5M006677 1.7e-35 153.7 226 39.8
Zm00008a018194 Zea mays PH207 HOM04x5M001618 ORTHO04x5M006677 2.2e-35 153.3 226 39.8
PAB00062977 Picea abies HOM04x5M001618 ORTHO04x5M004034 5.0e-35 152.1 98 77.6
Zm00007a00001551 Zea mays B104 HOM04x5M001618 ORTHO04x5M006677 3.2e-34 149.4 240 37.9
Zjn_sc00140.1.g00250.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001618 ORTHO04x5M006677 5.5e-34 148.7 123 56.9
PAB00015832 Picea abies HOM04x5M001618 ORTHO04x5M006677 1.8e-32 143.7 236 36.9
Sspon.05G0017710-4D Saccharum spontaneum HOM04x5M001618 ORTHO04x5M006677 7.0e-29 131.7 144 48.6
TraesCS4D02G078400 Triticum aestivum HOM04x5M001618 ORTHO04x5M006677 9.1e-29 131.3 120 53.3
PH01000869G0510 Phyllostachys edulis HOM04x5M001618 ORTHO04x5M162577 3.6e-25 119.4 113 64.6
Solyc00g017910.1 Solanum lycopersicum HOM04x5M001618 ORTHO04x5M202081 1.5e-23 114.0 185 33.0
Zm00007a00001553 Zea mays B104 HOM04x5M001618 ORTHO04x5M006677 9.8e-23 111.3 98 52.0
Zm00008a018196 Zea mays PH207 HOM04x5M001618 ORTHO04x5M006677 9.8e-23 111.3 98 52.0
PAB00007573 Picea abies HOM04x5M001618 ORTHO04x5M006677 2.9e-19 99.8 91 49.5
TRITD4Bv1G027040 Triticum turgidum HOM04x5M001618 ORTHO04x5M006677 1.0e-16 91.3 88 46.6
PAB00016271 Picea abies HOM04x5M001618 ORTHO04x5M157384 3.0e-16 89.7 134 44.8
Zjn_sc00012.1.g10370.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M001618 ORTHO04x5M241760 1.9e-10 70.5 38 81.6
PEQU_07668 Phalaenopsis equestris HOM04x5M006651 ORTHO04x5M008516 4.9e-06 55.8 182 29.1

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (4 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (4 genes)
Picea abies (6 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (9 genes)
Selaginella moellendorffii (5 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (2 genes)
Zea mays B73 (4 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (5 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

Program Settings