Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Aco020245	Ananas comosus	HOM04x5M001016	ORTHO04x5M001113	6.9e-114	412.5	193	100.0
Aco030505	Ananas comosus	HOM04x5M001016	ORTHO04x5M001113	8.0e-46	186.4	87	100.0
Aco019186	Ananas comosus	HOM04x5M001016	ORTHO04x5M001113	4.4e-36	154.1	71	100.0
Aco029013	Ananas comosus	HOM04x5M001016	ORTHO04x5M001113	2.6e-28	128.3	91	71.4
Aco025943	Ananas comosus	HOM04x5M001016	ORTHO04x5M001113	5.1e-16	87.4	104	54.8
HORVU5Hr1G032250	Hordeum vulgare	HOM04x5M001016	ORTHO04x5M001113	5.1e-16	87.4	104	54.8
Solyc01g007640.2	Solanum lycopersicum	HOM04x5M001016	ORTHO04x5M001113	1.6e-14	82.4	104	53.8
ATR0258G003	Amborella trichopoda	HOM04x5M001016	ORTHO04x5M001113	1.4e-13	79.3	106	52.8
ATCG01280	Arabidopsis thaliana	HOM04x5M001016	ORTHO04x5M001113	1.8e-13	79.0	104	51.9
ATCG00860	Arabidopsis thaliana	HOM04x5M001016	ORTHO04x5M001113	1.8e-13	79.0	104	51.9
Potri.013G138500	Populus trichocarpa	HOM04x5M001016	ORTHO04x5M001113	1.2e-12	76.3	91	54.9
Potri.013G143400	Populus trichocarpa	HOM04x5M001016	ORTHO04x5M001113	1.2e-12	76.3	91	54.9
Solyc03g080130.1	Solanum lycopersicum	HOM04x5M001016	ORTHO04x5M001113	6.0e-09	63.9	77	53.2
Solyc11g021070.1	Solanum lycopersicum	HOM04x5M001016	ORTHO04x5M001113	6.2e-06	53.9	74	52.7
Solyc09g031840.1	Solanum lycopersicum	HOM04x5M001016	ORTHO04x5M001113	8.1e-06	53.5	45	66.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment