Monocots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Aco014103	Ananas comosus	HOM04x5M005027	ORTHO04x5M006357	3.8e-262	906.4	487	100.0
Ma11_g22440	Musa acuminata	HOM04x5M005027	ORTHO04x5M006357	2.2e-172	608.2	481	64.7
Ma05_g31300	Musa acuminata	HOM04x5M005027	ORTHO04x5M006357	1.8e-171	605.1	479	64.7
Ma10_g05760	Musa acuminata	HOM04x5M005027	ORTHO04x5M006357	1.1e-163	579.3	468	63.5
p5.00_sc00084_p0029	Elaeis guineensis	HOM04x5M005027	ORTHO04x5M006357	4.5e-162	573.9	459	64.5
LOC_Os01g63690	Oryza sativa ssp. japonica	HOM04x5M005027	ORTHO04x5M006357	1.7e-156	555.4	452	63.3
OsR498G0102361800.01	Oryza sativa ssp. indica	HOM04x5M005027	ORTHO04x5M006357	4.8e-156	553.9	448	63.6
Seita.5G387000	Setaria italica	HOM04x5M005027	ORTHO04x5M006357	8.2e-156	553.1	463	62.6
Zjn_sc00040.1.g05820.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M005027	ORTHO04x5M006357	6.5e-153	543.5	441	64.2
Bradi2g55310	Brachypodium distachyon	HOM04x5M005027	ORTHO04x5M006357	4.2e-152	540.8	433	64.0
Oropetium_20150105_12835	Oropetium thomaeum	HOM04x5M005027	ORTHO04x5M006357	4.2e-152	540.8	442	63.8
TraesCS3A02G368800	Triticum aestivum	HOM04x5M005027	ORTHO04x5M006357	4.2e-152	540.8	435	64.8
ASH_gene15536	Apostasia shenzhenica	HOM04x5M005027	ORTHO04x5M006357	1.2e-151	539.3	481	60.3
TraesCS3D02G361800	Triticum aestivum	HOM04x5M005027	ORTHO04x5M006357	1.6e-151	538.9	435	64.4
HORVU3Hr1G084830	Hordeum vulgare	HOM04x5M005027	ORTHO04x5M006357	2.1e-151	538.5	435	64.8
OB01G46470	Oryza brachyantha	HOM04x5M005027	ORTHO04x5M006357	2.1e-151	538.5	473	60.7
Sobic.003G361100	Sorghum bicolor	HOM04x5M005027	ORTHO04x5M006357	2.1e-151	538.5	458	61.4
PH01000004G3370	Phyllostachys edulis	HOM04x5M005027	ORTHO04x5M006357	4.7e-151	537.3	453	62.0
Misin05G333200	Miscanthus sinensis	HOM04x5M005027	ORTHO04x5M006357	4.0e-150	534.3	471	60.3
Sspon.03G0002320-3C	Saccharum spontaneum	HOM04x5M005027	ORTHO04x5M006357	5.2e-150	533.9	426	63.6
Misin06G331100	Miscanthus sinensis	HOM04x5M005027	ORTHO04x5M006357	6.8e-150	533.5	426	63.8
TraesCS3B02G400800	Triticum aestivum	HOM04x5M005027	ORTHO04x5M006357	8.8e-150	533.1	435	63.7
Sspon.03G0002320-1A	Saccharum spontaneum	HOM04x5M005027	ORTHO04x5M006357	1.5e-149	532.3	426	63.6
Zm00007a00044283	Zea mays B104	HOM04x5M005027	ORTHO04x5M006357	8.3e-148	526.6	472	59.7
Zm00001d012321	Zea mays B73	HOM04x5M005027	ORTHO04x5M006357	1.1e-147	526.2	431	62.4
Zm00007a00042548	Zea mays B104	HOM04x5M005027	ORTHO04x5M006357	1.1e-147	526.2	431	62.4
Zjn_sc00009.1.g06110.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M005027	ORTHO04x5M006357	3.1e-147	524.6	430	63.7
Zm00001d042811	Zea mays B73	HOM04x5M005027	ORTHO04x5M006357	1.2e-146	522.7	472	59.7
Spipo23G0003600	Spirodela polyrhiza	HOM04x5M005027	ORTHO04x5M006357	1.0e-145	519.6	482	58.1
TRITD3Av1G221930	Triticum turgidum	HOM04x5M005027	ORTHO04x5M006357	3.8e-137	491.1	421	62.2
LP031349	Lolium perenne	HOM04x5M005027	ORTHO04x5M006357	6.6e-137	490.3	434	59.0
TRITD3Bv1G207870	Triticum turgidum	HOM04x5M005027	ORTHO04x5M006357	2.8e-135	485.0	421	61.3
GSVIVG01032858001	Vitis vinifera	HOM04x5M005027	ORTHO04x5M006357	3.3e-128	461.5	423	56.7
Potri.010G191300	Populus trichocarpa	HOM04x5M005027	ORTHO04x5M006357	6.2e-127	457.2	453	53.2
ATR0618G085	Amborella trichopoda	HOM04x5M005027	ORTHO04x5M006357	3.0e-121	438.3	433	52.0
Potri.008G066000	Populus trichocarpa	HOM04x5M005027	ORTHO04x5M006357	8.1e-119	430.3	466	49.8
AT2G40000	Arabidopsis thaliana	HOM04x5M005027	ORTHO04x5M006357	1.3e-113	412.9	436	50.5
Pgl_GLEAN_10020167	Cenchrus americanus	HOM04x5M005027	ORTHO04x5M006357	4.0e-110	401.4	275	70.9
AT3G55840	Arabidopsis thaliana	HOM04x5M005027	ORTHO04x5M006357	3.8e-108	394.8	437	49.2
Zosma172g00440	Zostera marina	HOM04x5M005027	ORTHO04x5M006357	4.2e-107	391.3	454	49.3
Zm00008a032853	Zea mays PH207	HOM04x5M005027	ORTHO04x5M006357	2.4e-94	349.0	348	55.2
Pp3c11_5520	Physcomitrium patens	HOM04x5M005027	ORTHO04x5M006357	6.9e-94	347.4	442	44.1
Pp3c1_9290	Physcomitrium patens	HOM04x5M005027	ORTHO04x5M006357	6.9e-94	347.4	442	43.9
Pp3c2_27180	Physcomitrium patens	HOM04x5M005027	ORTHO04x5M006357	2.6e-93	345.5	442	44.8
Pp3c7_23390	Physcomitrium patens	HOM04x5M005027	ORTHO04x5M006357	3.2e-91	338.6	442	43.2
Pp3c10_11250	Physcomitrium patens	HOM04x5M005027	ORTHO04x5M006357	4.3e-88	328.2	439	44.0
PAB00065532	Picea abies	HOM04x5M005027	ORTHO04x5M006357	4.8e-79	298.1	375	46.4
Pp3c1_34950	Physcomitrium patens	HOM04x5M005027	ORTHO04x5M006357	8.5e-68	260.8	349	42.4
Zm00008a013291	Zea mays PH207	HOM04x5M005027	ORTHO04x5M006357	1.4e-59	233.4	375	41.9
PEQU_41815	Phalaenopsis equestris	HOM04x5M005027	ORTHO04x5M006357	4.2e-59	231.9	179	65.9
PH01265225G0010	Phyllostachys edulis	HOM04x5M005027	ORTHO04x5M006357	2.1e-58	229.6	171	67.8
PH01000090G0620	Phyllostachys edulis	HOM04x5M005027	ORTHO04x5M006357	3.6e-58	228.8	147	75.5
HORVU3Hr1G111690	Hordeum vulgare	HOM04x5M005027	ORTHO04x5M006357	2.6e-32	142.9	122	63.9
PEQU_40122	Phalaenopsis equestris	HOM04x5M005027	ORTHO04x5M006357	5.9e-29	131.7	92	65.2
PAB00042765	Picea abies	HOM04x5M005027	ORTHO04x5M006357	2.4e-14	83.2	73	60.3
PAB00039682	Picea abies	HOM04x5M005027	ORTHO04x5M006357	1.9e-11	73.6	135	36.3
Zm00008a002569	Zea mays PH207	HOM04x5M005027	ORTHO04x5M256785	2.9e-07	59.7	54	57.4
ATR0693G017	Amborella trichopoda	HOM04x5M005027	ORTHO04x5M006357	8.3e-07	58.2	73	43.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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