Monocots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Aco012818	Ananas comosus	HOM04x5M006860	ORTHO04x5M008356	1.8e-42	174.5	107	100.0
p5.00_sc00023_p0061	Elaeis guineensis	HOM04x5M006860	ORTHO04x5M008356	8.5e-21	102.4	107	60.7
CALSI_Maker00048351	Calamus simplicifolius	HOM04x5M006860	ORTHO04x5M008356	4.2e-20	100.1	107	61.7
CALSI_Maker00016875	Calamus simplicifolius	HOM04x5M006860	ORTHO04x5M008356	4.2e-20	100.1	107	61.7
Bradi3g50710	Brachypodium distachyon	HOM04x5M006860	ORTHO04x5M008356	1.0e-18	95.5	63	77.8
Ma05_g13340	Musa acuminata	HOM04x5M006860	ORTHO04x5M008356	2.5e-17	90.9	107	58.9
Zosma31g01320	Zostera marina	HOM04x5M006860	ORTHO04x5M008356	1.7e-16	88.2	107	54.2
TraesCS6A02G250000	Triticum aestivum	HOM04x5M006860	ORTHO04x5M008356	4.8e-16	86.7	55	80.0
TraesCS6D02G231800	Triticum aestivum	HOM04x5M006860	ORTHO04x5M008356	4.8e-16	86.7	55	80.0
Misin07G434600	Miscanthus sinensis	HOM04x5M006860	ORTHO04x5M008356	6.3e-16	86.3	54	85.2
Sobic.004G294900	Sorghum bicolor	HOM04x5M006860	ORTHO04x5M008356	6.3e-16	86.3	54	85.2
Seita.1G260200	Setaria italica	HOM04x5M006860	ORTHO04x5M008356	1.1e-15	85.5	54	85.2
LOC_Os02g44100	Oryza sativa ssp. japonica	HOM04x5M006860	ORTHO04x5M008356	1.8e-15	84.7	55	80.0
OsR498G0204455300.01	Oryza sativa ssp. indica	HOM04x5M006860	ORTHO04x5M008356	1.8e-15	84.7	55	80.0
ASH_gene7707	Apostasia shenzhenica	HOM04x5M006860	ORTHO04x5M008356	2.4e-15	84.3	118	50.0
Ma04_g20200	Musa acuminata	HOM04x5M006860	ORTHO04x5M008356	4.1e-15	83.6	108	56.5
TraesCS6B02G275400	Triticum aestivum	HOM04x5M006860	ORTHO04x5M008356	5.3e-15	83.2	55	78.2
TRITD6Bv1G145210	Triticum turgidum	HOM04x5M006860	ORTHO04x5M008356	3.4e-14	80.5	53	79.2
Spipo0G0111500	Spirodela polyrhiza	HOM04x5M006860	ORTHO04x5M008356	5.9e-14	79.7	120	49.2
CALSI_Maker00035084	Calamus simplicifolius	HOM04x5M006860	ORTHO04x5M008356	1.1e-12	75.5	113	50.4
GSVIVG01006992001	Vitis vinifera	HOM04x5M006860	ORTHO04x5M008356	2.5e-12	74.3	112	50.9
PEQU_14479	Phalaenopsis equestris	HOM04x5M006860	ORTHO04x5M008356	4.2e-12	73.6	53	73.6
GSVIVG01004713001	Vitis vinifera	HOM04x5M006860	ORTHO04x5M008356	1.6e-11	71.6	112	50.0
Ma04_g35500	Musa acuminata	HOM04x5M006860	ORTHO04x5M008356	4.7e-11	70.1	105	49.5
LP006591	Lolium perenne	HOM04x5M006860	ORTHO04x5M008356	1.0e-10	68.9	99	50.5
PEQU_15417	Phalaenopsis equestris	HOM04x5M006860	ORTHO04x5M008356	5.1e-10	66.6	52	69.2
OB02G33880	Oryza brachyantha	HOM04x5M006860	ORTHO04x5M008356	6.7e-10	66.2	44	79.5
Solyc08g078560.2	Solanum lycopersicum	HOM04x5M006860	ORTHO04x5M008356	6.7e-10	66.2	61	63.9
Zm00008a022531	Zea mays PH207	HOM04x5M006860	ORTHO04x5M008356	8.8e-10	65.9	48	75.0
ASH_gene6425	Apostasia shenzhenica	HOM04x5M006860	ORTHO04x5M008356	1.1e-09	65.5	113	43.4
Zm00001d017491	Zea mays B73	HOM04x5M006860	ORTHO04x5M008356	2.0e-09	64.7	48	72.9
Zm00007a00015681	Zea mays B104	HOM04x5M006860	ORTHO04x5M008356	2.0e-09	64.7	48	72.9
Sspon.04G0035910-1P	Saccharum spontaneum	HOM04x5M006860	ORTHO04x5M008356	1.3e-08	62.0	42	81.0
TRITD6Av1G159280	Triticum turgidum	HOM04x5M006860	ORTHO04x5M008356	2.2e-08	61.2	96	44.8
Ma09_g20360	Musa acuminata	HOM04x5M006860	ORTHO04x5M008356	4.8e-08	60.1	104	48.1
PAB00035741	Picea abies	HOM04x5M006860	ORTHO04x5M008356	1.2e-06	55.5	38	78.9
evm.TU.AsparagusV1_10.809.V1.1	Asparagus officinalis	HOM04x5M006860	ORTHO04x5M008356	4.5e-06	53.5	97	42.3
Potri.001G333800	Populus trichocarpa	HOM04x5M006860	ORTHO04x5M008356	5.9e-06	53.1	106	42.5

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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