Interactive Phylogenetics Module

Gene Id
AT4G05000

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G05000 Arabidopsis thaliana HOM04x5M005753 ORTHO04x5M007082 1.9e-112 407.9 211 100.0
AT4G21560 Arabidopsis thaliana HOM04x5M005753 ORTHO04x5M007082 1.0e-102 375.6 210 91.0
Potri.004G035500 Populus trichocarpa HOM04x5M005753 ORTHO04x5M007082 6.9e-99 362.8 210 87.1
Solyc02g080270.2 Solanum lycopersicum HOM04x5M005753 ORTHO04x5M007082 6.9e-99 362.8 210 86.7
Solyc03g031750.1 Solanum lycopersicum HOM04x5M005753 ORTHO04x5M007082 2.3e-94 347.8 210 83.8
GSVIVG01006715001 Vitis vinifera HOM04x5M005753 ORTHO04x5M007082 6.6e-94 346.3 210 82.4
Potri.011G043800 Populus trichocarpa HOM04x5M005753 ORTHO04x5M007082 1.1e-91 339.0 210 81.4
p5.00_sc00259_p0012 Elaeis guineensis HOM04x5M005753 ORTHO04x5M007082 4.5e-82 307.0 212 73.6
p5.00_sc00154_p0042 Elaeis guineensis HOM04x5M005753 ORTHO04x5M007082 5.5e-80 300.1 212 71.2
ATR1149G025 Amborella trichopoda HOM04x5M005753 ORTHO04x5M007082 3.5e-79 297.4 207 71.5
ASH_gene14924 Apostasia shenzhenica HOM04x5M005753 ORTHO04x5M007082 1.1e-77 292.4 207 71.5
Aco014399 Ananas comosus HOM04x5M005753 ORTHO04x5M007082 2.5e-77 291.2 215 68.8
Ma08_g03290 Musa acuminata HOM04x5M005753 ORTHO04x5M007082 5.6e-77 290.0 213 67.1
PAB00012356 Picea abies HOM04x5M005753 ORTHO04x5M007082 4.8e-76 287.0 205 68.8
Mapoly0186s0005 Marchantia polymorpha HOM04x5M005753 ORTHO04x5M007082 1.8e-75 285.0 209 68.9
Ma10_g10040 Musa acuminata HOM04x5M005753 ORTHO04x5M007082 2.4e-75 284.6 213 66.7
Zosma467g00170 Zostera marina HOM04x5M005753 ORTHO04x5M007082 5.3e-75 283.5 210 70.0
Pp3c14_20060 Physcomitrium patens HOM04x5M005753 ORTHO04x5M007082 4.2e-72 273.9 206 64.1
Pp3c17_18750 Physcomitrium patens HOM04x5M005753 ORTHO04x5M007082 1.0e-70 269.2 206 63.6
CALSI_Maker00015618 Calamus simplicifolius HOM04x5M005753 ORTHO04x5M007082 1.1e-69 265.8 191 70.7
gene13632 Selaginella moellendorffii HOM04x5M005753 ORTHO04x5M007082 8.2e-68 259.6 206 62.1
gene12907 Selaginella moellendorffii HOM04x5M005753 ORTHO04x5M007082 8.2e-68 259.6 206 62.1
Bradi2g51800 Brachypodium distachyon HOM04x5M005753 ORTHO04x5M007082 1.4e-64 248.8 213 61.0
CALSI_Maker00002332 Calamus simplicifolius HOM04x5M005753 ORTHO04x5M007082 3.2e-64 247.7 210 62.4
Zjn_sc00040.1.g01780.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M005753 ORTHO04x5M007082 7.2e-64 246.5 215 60.0
LOC_Os01g57260 Oryza sativa ssp. japonica HOM04x5M005753 ORTHO04x5M007082 3.6e-63 244.2 213 60.1
OsR498G0102101700.01 Oryza sativa ssp. indica HOM04x5M005753 ORTHO04x5M007082 3.6e-63 244.2 213 60.1
Zm00007a00050933 Zea mays B104 HOM04x5M005753 ORTHO04x5M007082 4.6e-63 243.8 213 59.6
LP036182 Lolium perenne HOM04x5M005753 ORTHO04x5M007082 1.3e-62 242.3 215 59.1
Zm00001d043269 Zea mays B73 HOM04x5M005753 ORTHO04x5M007082 1.3e-62 242.3 213 59.2
Zm00001d012618 Zea mays B73 HOM04x5M005753 ORTHO04x5M007082 1.8e-62 241.9 213 59.2
PH01000267G1150 Phyllostachys edulis HOM04x5M005753 ORTHO04x5M007082 2.3e-62 241.5 210 60.5
Zjn_sc00009.1.g09930.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M005753 ORTHO04x5M007082 2.3e-62 241.5 216 58.8
Zm00007a00024916 Zea mays B104 HOM04x5M005753 ORTHO04x5M007082 2.3e-62 241.5 213 59.2
PH01000109G1220 Phyllostachys edulis HOM04x5M005753 ORTHO04x5M007082 3.0e-62 241.1 213 59.6
Sobic.003G317200 Sorghum bicolor HOM04x5M005753 ORTHO04x5M007082 3.0e-62 241.1 213 58.7
Oropetium_20150105_12722 Oropetium thomaeum HOM04x5M005753 ORTHO04x5M007082 5.1e-62 240.4 215 58.6
Misin05G292600 Miscanthus sinensis HOM04x5M005753 ORTHO04x5M007082 6.7e-62 240.0 213 58.7
Seita.5G340600 Setaria italica HOM04x5M005753 ORTHO04x5M007082 1.5e-61 238.8 210 59.5
Misin06G281600 Miscanthus sinensis HOM04x5M005753 ORTHO04x5M007082 3.3e-61 237.7 213 58.2
OB01G42010 Oryza brachyantha HOM04x5M000005 ORTHO04x5M000867 6.9e-59 229.9 202 60.4
TraesCS3D02G314200 Triticum aestivum HOM04x5M005753 ORTHO04x5M007082 3.8e-57 224.2 214 56.1
TraesCS3B02G349400 Triticum aestivum HOM04x5M005753 ORTHO04x5M007082 6.1e-55 216.9 214 54.7
TRITD3Bv1G178970 Triticum turgidum HOM04x5M005753 ORTHO04x5M007082 6.1e-55 216.9 214 54.7
Cre16.g678100 Chlamydomonas reinhardtii HOM04x5M005753 ORTHO04x5M007082 2.3e-54 214.9 205 52.2
Zm00008a033108 Zea mays PH207 HOM04x5M005753 ORTHO04x5M007082 3.0e-54 214.5 192 59.4
TraesCS3A02G317000 Triticum aestivum HOM04x5M005753 ORTHO04x5M007082 4.4e-53 210.7 214 53.7
TRITD3Av1G201290 Triticum turgidum HOM04x5M005753 ORTHO04x5M007082 4.4e-53 210.7 214 53.7
Zm00008a013662 Zea mays PH207 HOM04x5M005753 ORTHO04x5M007082 9.7e-45 183.0 218 47.7
Pgl_GLEAN_10012920 Cenchrus americanus HOM04x5M005753 ORTHO04x5M007082 3.1e-43 177.9 360 34.2
MCO01G694 Micromonas commoda HOM04x5M005753 ORTHO04x5M007082 1.7e-25 119.0 233 36.5
Ma10_g09150 Musa acuminata HOM04x5M000001 ORTHO04x5M000001 2.7e-18 95.1 88 50.0
Spipo8G0015400 Spirodela polyrhiza HOM04x5M005753 ORTHO04x5M007082 4.7e-15 84.3 63 65.1
PEQU_04978 Phalaenopsis equestris HOM04x5M005753 ORTHO04x5M007082 4.9e-12 74.3 53 64.2
Zjn_sc00019.1.g01060.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M005753 ORTHO04x5M007082 9.5e-08 60.1 41 65.9

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (0 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (0 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings