Interactive Phylogenetics Module

Gene Id
AT3G56900

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G56900 Arabidopsis thaliana HOM04x5M004507 ORTHO04x5M005410 1.1e-250 868.2 448 100.0
Potri.016G030400 Populus trichocarpa HOM04x5M004507 ORTHO04x5M005410 1.2e-180 635.6 452 68.4
Ma08_g26840 Musa acuminata HOM04x5M004507 ORTHO04x5M005410 2.6e-172 607.8 448 69.2
ASH_gene5141 Apostasia shenzhenica HOM04x5M004507 ORTHO04x5M005410 1.5e-159 565.5 446 60.5
p5.00_sc00094_p0061 Elaeis guineensis HOM04x5M004507 ORTHO04x5M005410 1.5e-156 555.4 449 62.4
TraesCS5D02G152200 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 7.1e-154 546.6 446 60.8
HORVU5Hr1G045070 Hordeum vulgare HOM04x5M004507 ORTHO04x5M005410 1.7e-152 542.0 446 60.8
OB11G11590 Oryza brachyantha HOM04x5M004507 ORTHO04x5M005410 2.3e-152 541.6 446 60.8
OsR498G1220875600.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 3.3e-151 537.7 448 60.0
Sobic.008G017200 Sorghum bicolor HOM04x5M004507 ORTHO04x5M005410 5.6e-151 537.0 449 59.7
OsR498G1119370400.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 7.3e-151 536.6 447 59.3
LOC_Os12g03540 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 1.3e-150 535.8 448 59.8
Seita.7G310400 Setaria italica HOM04x5M004507 ORTHO04x5M005410 6.2e-150 533.5 445 59.1
LOC_Os11g03794 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 2.4e-149 531.6 447 58.8
TraesCS5A02G138500 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 2.4e-149 531.6 446 60.1
Misin15G007600 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 4.0e-149 530.8 449 58.8
Seita.8G003800 Setaria italica HOM04x5M004507 ORTHO04x5M005410 4.5e-148 527.3 453 59.4
LP033593 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 1.6e-142 508.8 446 58.7
Zosma6g00180 Zostera marina HOM04x5M004507 ORTHO04x5M005410 6.2e-142 506.9 452 58.0
Oropetium_20150105_11037 Oropetium thomaeum HOM04x5M004507 ORTHO04x5M005410 1.3e-136 489.2 449 55.2
Zm00008a036332 Zea mays PH207 HOM04x5M004507 ORTHO04x5M005410 4.1e-133 477.6 444 54.3
MisinT482300 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 1.0e-131 473.0 407 57.0
TraesCS5B02G138600 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 1.1e-130 469.5 446 54.5
TRITD5Bv1G088770 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 1.1e-130 469.5 446 54.5
TRITD5Av1G105920 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 7.2e-130 466.8 451 53.9
CALSI_Maker00048110 Calamus simplicifolius HOM04x5M004507 ORTHO04x5M005410 1.5e-124 449.1 400 57.8
Aco023948 Ananas comosus HOM04x5M004507 ORTHO04x5M005410 6.1e-113 410.6 405 54.1
Mapoly0010s0124 Marchantia polymorpha HOM04x5M004507 ORTHO04x5M005410 1.3e-110 402.9 480 45.6
Sspon.07G0038610-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 7.0e-109 397.1 445 48.3
gene10650 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 3.2e-106 388.3 481 43.9
gene36333 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 3.2e-106 388.3 481 43.9
Pp3c11_18220 Physcomitrium patens HOM04x5M004507 ORTHO04x5M005410 1.8e-104 382.5 461 42.5
Pgl_GLEAN_10033199 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 3.1e-101 371.7 429 46.9
Bradi4g43700 Brachypodium distachyon HOM04x5M004507 ORTHO04x5M005410 1.6e-97 359.4 432 46.1
GSVIVG01025850001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 1.3e-91 339.7 232 71.6
Sspon.07G0019960-1A Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 2.3e-80 302.4 388 43.6
Sspon.07G0038600-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 2.3e-80 302.4 445 40.2
Pgl_GLEAN_10009938 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 8.9e-80 300.4 320 49.4
evm.TU.AsparagusV1_02.1443.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 4.4e-79 298.1 204 70.1
gene37195 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 5.7e-79 297.7 248 56.5
Sspon.07G0019960-2C Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 3.7e-78 295.0 420 42.1
ATR0307G134 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 1.6e-76 289.7 202 68.8
OB12G11930 Oryza brachyantha HOM04x5M004507 ORTHO04x5M006219 1.9e-74 282.7 431 42.0
Spipo6G0054400 Spirodela polyrhiza HOM04x5M004507 ORTHO04x5M005410 7.3e-74 280.8 202 65.8
PEQU_35849 Phalaenopsis equestris HOM04x5M004507 ORTHO04x5M005410 8.0e-73 277.3 332 51.2
Zm00007a00022532 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 1.0e-72 276.9 202 68.8
evm.TU.AsparagusV1_02.1442.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 1.2e-71 273.5 233 57.1
ATR0307G100 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 2.0e-63 246.1 234 51.7
Zm00001d023264 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 1.7e-59 233.0 229 50.2
Solyc08g036600.1 Solanum lycopersicum HOM04x5M004507 ORTHO04x5M005410 3.6e-57 225.3 207 55.6
GSVIVG01025851001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 3.0e-51 205.7 181 56.9
Sspon.07G0019960-1P Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 1.1e-48 197.2 248 43.5
Zm00001d023266 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 1.7e-43 179.9 126 69.8
PAB00036398 Picea abies HOM04x5M004507 ORTHO04x5M005410 6.6e-43 177.9 105 79.0
LP035520 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 4.9e-38 161.8 106 68.9
MCO12G281 Micromonas commoda HOM04x5M004507 ORTHO04x5M005410 1.0e-22 110.9 220 36.8
Zjn_sc00167.1.g00370.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 3.8e-14 82.4 140 39.3
Zjn_sc00067.1.g00340.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 4.2e-13 79.0 137 37.2
OsR498G1220885900.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 2.3e-11 73.2 94 45.7
Zm00007a00022530 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 1.5e-10 70.5 105 37.1
Cre10.g466300 Chlamydomonas reinhardtii HOM04x5M004507 ORTHO04x5M005410 2.2e-09 66.6 350 27.4

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (3 genes)
Setaria italica (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings