Interactive Phylogenetics Module

Gene Id
AT3G55840

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G55840 Arabidopsis thaliana HOM04x5M005027 ORTHO04x5M006357 2.9e-245 850.1 429 100.0
AT2G40000 Arabidopsis thaliana HOM04x5M005027 ORTHO04x5M006357 7.7e-174 612.8 439 73.1
GSVIVG01032858001 Vitis vinifera HOM04x5M005027 ORTHO04x5M006357 4.7e-139 497.3 432 59.5
Potri.008G066000 Populus trichocarpa HOM04x5M005027 ORTHO04x5M006357 4.9e-136 487.3 441 57.6
Potri.010G191300 Populus trichocarpa HOM04x5M005027 ORTHO04x5M006357 1.7e-128 462.2 466 53.9
Spipo23G0003600 Spirodela polyrhiza HOM04x5M005027 ORTHO04x5M006357 4.5e-113 411.0 463 50.3
p5.00_sc00084_p0029 Elaeis guineensis HOM04x5M005027 ORTHO04x5M006357 6.4e-112 407.1 432 50.9
Ma05_g31300 Musa acuminata HOM04x5M005027 ORTHO04x5M006357 1.5e-108 396.0 434 48.6
Ma11_g22440 Musa acuminata HOM04x5M005027 ORTHO04x5M006357 1.9e-108 395.6 434 49.3
Aco014103 Ananas comosus HOM04x5M005027 ORTHO04x5M006357 9.0e-106 386.7 437 49.2
ATR0618G085 Amborella trichopoda HOM04x5M005027 ORTHO04x5M006357 4.5e-105 384.4 417 48.2
Sobic.003G361100 Sorghum bicolor HOM04x5M005027 ORTHO04x5M006357 1.0e-104 383.3 457 47.0
Ma10_g05760 Musa acuminata HOM04x5M005027 ORTHO04x5M006357 2.9e-104 381.7 447 48.3
Seita.5G387000 Setaria italica HOM04x5M005027 ORTHO04x5M006357 1.4e-103 379.4 462 46.8
Misin05G333200 Miscanthus sinensis HOM04x5M005027 ORTHO04x5M006357 2.5e-103 378.6 457 46.8
ASH_gene15536 Apostasia shenzhenica HOM04x5M005027 ORTHO04x5M006357 2.3e-101 372.1 426 48.4
Bradi2g55310 Brachypodium distachyon HOM04x5M005027 ORTHO04x5M006357 2.3e-101 372.1 450 46.0
Sspon.03G0002320-3C Saccharum spontaneum HOM04x5M005027 ORTHO04x5M006357 3.0e-101 371.7 419 47.7
Zm00007a00044283 Zea mays B104 HOM04x5M005027 ORTHO04x5M006357 3.0e-101 371.7 456 46.7
Zm00001d042811 Zea mays B73 HOM04x5M005027 ORTHO04x5M006357 5.1e-101 370.9 456 46.9
Misin06G331100 Miscanthus sinensis HOM04x5M005027 ORTHO04x5M006357 6.7e-101 370.5 418 48.1
Sspon.03G0002320-1A Saccharum spontaneum HOM04x5M005027 ORTHO04x5M006357 8.7e-101 370.2 419 47.7
LOC_Os01g63690 Oryza sativa ssp. japonica HOM04x5M005027 ORTHO04x5M006357 1.1e-100 369.8 431 46.9
Oropetium_20150105_12835 Oropetium thomaeum HOM04x5M005027 ORTHO04x5M006357 5.7e-100 367.5 457 46.2
OsR498G0102361800.01 Oryza sativa ssp. indica HOM04x5M005027 ORTHO04x5M006357 9.6e-100 366.7 419 47.7
TraesCS3D02G361800 Triticum aestivum HOM04x5M005027 ORTHO04x5M006357 9.6e-100 366.7 450 47.1
Zm00001d012321 Zea mays B73 HOM04x5M005027 ORTHO04x5M006357 9.6e-100 366.7 427 47.3
Zm00007a00042548 Zea mays B104 HOM04x5M005027 ORTHO04x5M006357 9.6e-100 366.7 427 47.3
HORVU3Hr1G084830 Hordeum vulgare HOM04x5M005027 ORTHO04x5M006357 1.3e-99 366.3 450 47.3
TraesCS3B02G400800 Triticum aestivum HOM04x5M005027 ORTHO04x5M006357 1.3e-99 366.3 450 47.3
PH01000004G3370 Phyllostachys edulis HOM04x5M005027 ORTHO04x5M006357 1.6e-99 365.9 456 45.6
TraesCS3A02G368800 Triticum aestivum HOM04x5M005027 ORTHO04x5M006357 2.1e-99 365.5 450 47.8
Zjn_sc00040.1.g05820.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M005027 ORTHO04x5M006357 2.1e-99 365.5 457 45.5
Zosma172g00440 Zostera marina HOM04x5M005027 ORTHO04x5M006357 2.6e-97 358.6 437 48.5
Zjn_sc00009.1.g06110.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M005027 ORTHO04x5M006357 5.0e-96 354.4 415 47.0
OB01G46470 Oryza brachyantha HOM04x5M005027 ORTHO04x5M006357 8.4e-96 353.6 433 45.7
LP031349 Lolium perenne HOM04x5M005027 ORTHO04x5M006357 1.5e-89 332.8 454 43.0
TRITD3Bv1G207870 Triticum turgidum HOM04x5M005027 ORTHO04x5M006357 9.4e-87 323.6 414 46.4
TRITD3Av1G221930 Triticum turgidum HOM04x5M005027 ORTHO04x5M006357 1.6e-86 322.8 414 46.9
Pp3c11_5520 Physcomitrium patens HOM04x5M005027 ORTHO04x5M006357 6.3e-83 310.8 444 40.5
Pp3c2_27180 Physcomitrium patens HOM04x5M005027 ORTHO04x5M006357 1.8e-82 309.3 425 41.4
Pp3c1_9290 Physcomitrium patens HOM04x5M005027 ORTHO04x5M006357 1.8e-82 309.3 444 40.1
Pp3c7_23390 Physcomitrium patens HOM04x5M005027 ORTHO04x5M006357 1.7e-80 302.8 444 39.4
Pp3c10_11250 Physcomitrium patens HOM04x5M005027 ORTHO04x5M006357 8.2e-75 283.9 434 38.2
Pgl_GLEAN_10020167 Cenchrus americanus HOM04x5M005027 ORTHO04x5M006357 1.1e-74 283.5 273 52.4
Zm00008a032853 Zea mays PH207 HOM04x5M005027 ORTHO04x5M006357 2.7e-70 268.9 312 46.2
PAB00065532 Picea abies HOM04x5M005027 ORTHO04x5M006357 9.4e-63 243.8 371 38.8
Pp3c1_34950 Physcomitrium patens HOM04x5M005027 ORTHO04x5M006357 7.0e-58 227.6 344 38.7
Zm00008a013291 Zea mays PH207 HOM04x5M005027 ORTHO04x5M006357 6.8e-45 184.5 336 36.9
PEQU_41815 Phalaenopsis equestris HOM04x5M005027 ORTHO04x5M006357 3.4e-44 182.2 178 51.1
PH01265225G0010 Phyllostachys edulis HOM04x5M005027 ORTHO04x5M006357 5.0e-40 168.3 168 49.4
PH01000090G0620 Phyllostachys edulis HOM04x5M005027 ORTHO04x5M006357 2.9e-35 152.5 148 54.1
HORVU3Hr1G111690 Hordeum vulgare HOM04x5M005027 ORTHO04x5M006357 4.9e-19 98.6 123 46.3
PEQU_40122 Phalaenopsis equestris HOM04x5M005027 ORTHO04x5M006357 8.4e-19 97.8 94 53.2
PAB00042765 Picea abies HOM04x5M005027 ORTHO04x5M006357 4.9e-11 72.0 77 45.5
PAB00039682 Picea abies HOM04x5M005027 ORTHO04x5M006357 1.9e-10 70.1 133 34.6

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (0 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (6 genes)
Picea abies (3 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (2 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (1 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings