Interactive Phylogenetics Module

Gene Id
AT3G24870

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G24870 Arabidopsis thaliana HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3576.2 1908 100.0
AT3G24880 Arabidopsis thaliana HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3467.9 1910 97.0
Potri.002G243400 Populus trichocarpa HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1339.3 2003 47.1
Potri.014G189900 Populus trichocarpa HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1315.8 1834 48.5
GSVIVG01028685001 Vitis vinifera HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1289.2 1862 47.0
Solyc06g083420.1 Solanum lycopersicum HOM04x5M002407 ORTHO04x5M002528 1.4e-288 996.1 2012 40.1
Solyc09g060080.2 Solanum lycopersicum HOM04x5M002407 ORTHO04x5M002528 7.2e-288 993.8 2017 39.1
p5.00_sc00199_p0017 Elaeis guineensis HOM04x5M002407 ORTHO04x5M002528 5.0e-281 971.1 1981 38.7
Ma01_g14420 Musa acuminata HOM04x5M002407 ORTHO04x5M002528 1.0e-270 936.8 1958 37.8
p5.00_sc00074_p0086 Elaeis guineensis HOM04x5M002407 ORTHO04x5M002528 8.5e-265 917.1 1764 40.6
evm.TU.AsparagusV1_01.2274.V1.1 Asparagus officinalis HOM04x5M002407 ORTHO04x5M002528 8.3e-260 900.6 1794 39.6
Ma11_g11890 Musa acuminata HOM04x5M002407 ORTHO04x5M002528 5.3e-259 897.9 1849 38.4
Aco022002 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 2.2e-257 892.5 1949 38.0
ASH_gene3664 Apostasia shenzhenica HOM04x5M002407 ORTHO04x5M002528 3.6e-239 832.0 1598 39.5
OB01G30180 Oryza brachyantha HOM04x5M002407 ORTHO04x5M002528 7.3e-232 807.7 1603 38.4
OsR498G0815305000.01 Oryza sativa ssp. indica HOM04x5M002407 ORTHO04x5M002528 9.5e-232 807.4 1576 39.0
evm.TU.AsparagusV1_06.828.V1.1 Asparagus officinalis HOM04x5M002407 ORTHO04x5M002528 2.1e-226 789.6 1565 38.1
TraesCS3B02G235600 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 7.8e-226 787.7 1595 38.2
TRITD3Bv1G121350 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 1.3e-225 786.9 1595 38.2
PH01000633G0070 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 6.2e-223 778.1 1763 35.6
PEQU_06129 Phalaenopsis equestris HOM04x5M002407 ORTHO04x5M002528 1.4e-222 776.9 1988 36.0
TraesCS3D02G211100 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 2.3e-222 776.2 1596 37.7
TraesCS3A02G208200 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 1.2e-218 763.8 1595 37.8
PH01004832G0100 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 1.6e-218 763.5 1932 35.1
TRITD3Av1G132070 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 1.6e-218 763.5 1596 37.8
LP037312 Lolium perenne HOM04x5M002407 ORTHO04x5M002528 2.4e-211 739.6 1991 34.0
Spipo6G0019000 Spirodela polyrhiza HOM04x5M002407 ORTHO04x5M002528 5.4e-211 738.4 1479 38.1
Sobic.003G196300 Sorghum bicolor HOM04x5M002407 ORTHO04x5M002528 1.6e-207 726.9 1581 36.7
Misin06G171000 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 4.8e-207 725.3 1940 34.1
Zm00008a014469 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 8.1e-207 724.5 1939 34.0
Seita.5G259200 Setaria italica HOM04x5M002407 ORTHO04x5M002528 1.5e-205 720.3 1948 33.6
Pgl_GLEAN_10014164 Cenchrus americanus HOM04x5M002407 ORTHO04x5M002528 7.6e-205 718.0 1941 33.7
Zm00007a00016337 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 3.5e-202 709.1 1948 32.9
Zm00008a014468 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 1.7e-201 706.8 1949 33.1
Bradi2g14375 Brachypodium distachyon HOM04x5M002407 ORTHO04x5M002528 3.0e-201 706.1 2010 33.6
Bradi2g41720 Brachypodium distachyon HOM04x5M002407 ORTHO04x5M002528 8.1e-199 698.0 1477 37.2
TraesCS1A02G439500 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 6.4e-196 688.3 1616 36.9
TRITD1Bv1G226860 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 4.2e-195 685.6 1615 36.9
Misin16G251200 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 1.6e-194 683.7 1646 35.0
TraesCS1B02G474800 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 1.6e-194 683.7 1609 36.7
LP009998 Lolium perenne HOM04x5M002407 ORTHO04x5M002528 6.7e-193 678.3 1999 32.9
PH01000391G0300 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 8.7e-193 677.9 1425 37.8
Seita.3G121600 Setaria italica HOM04x5M002407 ORTHO04x5M002528 8.7e-193 677.9 1445 36.3
TraesCS1D02G448700 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 1.8e-190 670.2 1603 36.5
Zjn_sc00021.1.g01830.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002407 ORTHO04x5M002528 3.4e-189 666.0 1934 32.4
Zosma2g02260 Zostera marina HOM04x5M002407 ORTHO04x5M002528 1.8e-185 653.7 1779 34.6
Oropetium_20150105_19585 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 4.5e-181 639.0 1927 32.4
Sobic.009G256300 Sorghum bicolor HOM04x5M002407 ORTHO04x5M002528 5.8e-181 638.6 2010 32.0
Sspon.03G0012710-2B Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 2.9e-180 636.3 1860 33.5
Misin17G265800 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 8.4e-180 634.8 1545 34.9
OB05G35500 Oryza brachyantha HOM04x5M002407 ORTHO04x5M002528 2.7e-178 629.8 1935 33.3
Pgl_GLEAN_10003768 Cenchrus americanus HOM04x5M002407 ORTHO04x5M002528 2.3e-177 626.7 1606 34.7
Zm00001d044283 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 9.7e-160 568.2 1473 33.6
Zosma44g00240 Zostera marina HOM04x5M002407 ORTHO04x5M002528 7.0e-142 508.8 1844 31.1
TRITD1Av1G228790 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 7.2e-139 498.8 1196 36.6
Zm00001d044281 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 1.7e-135 487.6 1355 32.4
PH01000410G0660 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 1.5e-115 421.4 1012 36.0
Zm00001d009750 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 2.8e-106 390.6 876 34.8
Aco029545 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 3.6e-106 390.2 1252 30.7
Aco011807 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 3.6e-106 390.2 1252 30.7
CALSI_Maker00041609 Calamus simplicifolius HOM04x5M002407 ORTHO04x5M002528 1.4e-105 388.3 924 35.7
LOC_Os08g08000 Oryza sativa ssp. japonica HOM04x5M002407 ORTHO04x5M002528 8.1e-98 362.5 808 36.8
ATR0796G143 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 1.0e-92 345.5 385 52.5
Zm00007a00045663 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 6.9e-89 332.8 823 34.0
Oropetium_20150105_04068 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 4.9e-79 300.1 1009 31.3
PAB00036669 Picea abies HOM04x5M002407 ORTHO04x5M002528 3.9e-76 290.4 1046 30.7
Sspon.03G0012710-1A Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 2.5e-75 287.7 799 34.3
Mapoly0075s0051 Marchantia polymorpha HOM04x5M002407 ORTHO04x5M002528 1.7e-71 275.0 1675 26.8
gene29448 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M002528 6.7e-68 263.1 1284 26.8
gene19536 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M002528 1.5e-67 261.9 1285 26.6
CALSI_Maker00029449 Calamus simplicifolius HOM04x5M002407 ORTHO04x5M002528 6.5e-63 246.5 291 53.3
OsR498G0511447400.01 Oryza sativa ssp. indica HOM04x5M002407 ORTHO04x5M002528 6.7e-60 236.5 796 31.4
Zm00008a030915 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 3.4e-56 224.2 481 34.9
Pp3c26_13463 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 1.3e-55 222.2 1511 26.5
Pp3c26_13460 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 1.3e-55 222.2 1511 26.5
ATR0618G010 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 1.7e-55 221.9 828 32.1
Pp3c4_31630 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 9.4e-54 216.1 1002 26.5
Pp3c26_13270 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 2.6e-48 198.0 1459 25.5
Pp3c26_13274 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 2.6e-48 198.0 1459 25.5
Zm00007a00039067 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 3.8e-47 194.1 787 29.9
ATR0796G038 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 1.6e-45 188.7 666 32.6
Pp3c7_10800 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 6.7e-44 183.3 1086 25.5
Zm00007a00016339 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 2.0e-43 181.8 661 30.7
PAB00026248 Picea abies HOM04x5M002407 ORTHO04x5M002528 3.3e-43 181.0 131 65.6
Zm00007a00016338 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 3.7e-42 177.6 277 41.5
Zm00001d009751 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 1.6e-37 162.2 792 28.4
Sspon.07G0000180-1A Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 5.2e-36 157.1 275 40.0
LOC_Os05g51550 Oryza sativa ssp. japonica HOM04x5M002407 ORTHO04x5M002528 1.8e-33 148.7 334 36.5
Zjn_sc00036.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002407 ORTHO04x5M002528 9.4e-30 136.3 156 53.8
gene37402 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M027836 3.1e-25 121.3 741 24.0
gene28281 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M027836 1.2e-24 119.4 741 23.9
PAB00055384 Picea abies HOM04x5M002407 ORTHO04x5M002528 2.1e-21 108.6 286 33.2
Oropetium_20150105_04067 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 2.2e-18 98.6 74 59.5
Zm00008a030916 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 1.4e-17 95.9 278 32.7
ATR0796G299 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 1.7e-15 89.0 279 33.0
PAB00012890 Picea abies HOM04x5M002407 ORTHO04x5M002528 4.7e-13 80.9 76 60.5
Zm00008a030914 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 1.0e-12 79.7 234 31.6
gene19163 Selaginella moellendorffii HOM04x5M000092 ORTHO04x5M004291 4.6e-08 64.3 200 26.0
Mapoly0111s0052 Marchantia polymorpha HOM04x5M000092 ORTHO04x5M004291 1.3e-07 62.8 143 31.5
Pp3c10_13800 Physcomitrium patens HOM04x5M000092 ORTHO04x5M004291 2.3e-07 62.0 134 28.4
gene16531 Selaginella moellendorffii HOM04x5M000092 ORTHO04x5M004291 3.9e-07 61.2 200 25.5
Zosma33g01020 Zostera marina HOM04x5M000092 ORTHO04x5M004291 5.0e-07 60.8 79 40.5
AT3G12810 Arabidopsis thaliana HOM04x5M000092 ORTHO04x5M004291 6.6e-07 60.5 85 41.2
Solyc03g063220.1 Solanum lycopersicum HOM04x5M000092 ORTHO04x5M004291 8.6e-07 60.1 79 40.5
Spipo15G0005600 Spirodela polyrhiza HOM04x5M000092 ORTHO04x5M004291 1.9e-06 58.9 79 36.7
Aco017256 Ananas comosus HOM04x5M000092 ORTHO04x5M004291 2.5e-06 58.5 79 38.0
Aco020984 Ananas comosus HOM04x5M000092 ORTHO04x5M004291 2.5e-06 58.5 79 38.0
evm.TU.AsparagusV1_03.1895.V1.1 Asparagus officinalis HOM04x5M000092 ORTHO04x5M004291 3.3e-06 58.2 83 37.3
Bradi2g42340 Brachypodium distachyon HOM04x5M000092 ORTHO04x5M004291 4.3e-06 57.8 99 35.4
GSVIVG01033511001 Vitis vinifera HOM04x5M000092 ORTHO04x5M004291 4.3e-06 57.8 79 36.7
Cre13.g605800 Chlamydomonas reinhardtii HOM04x5M002407 ORTHO04x5M002528 5.6e-06 57.4 70 42.9
Ma03_g27690 Musa acuminata HOM04x5M000092 ORTHO04x5M004291 5.6e-06 57.4 79 36.7
ASH_gene4092 Apostasia shenzhenica HOM04x5M000092 ORTHO04x5M004291 7.3e-06 57.0 91 34.1
CALSI_Maker00014164 Calamus simplicifolius HOM04x5M000092 ORTHO04x5M004291 7.3e-06 57.0 79 36.7
Potri.001G207700 Populus trichocarpa HOM04x5M000092 ORTHO04x5M004291 9.5e-06 56.6 79 36.7
Potri.003G022100 Populus trichocarpa HOM04x5M000092 ORTHO04x5M004291 9.5e-06 56.6 79 36.7

Amborella trichopoda (4 genes)
Ananas comosus (5 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (0 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (7 genes)
Picea abies (4 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (2 genes)
Zea mays B73 (4 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (5 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)