Interactive Phylogenetics Module

Gene Id
AT1G50500

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G50500 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1580.5 829 100.0
Potri.016G023000 Populus trichocarpa HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1255.7 829 80.1
Solyc04g049490.2 Solanum lycopersicum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1218.0 828 77.3
GSVIVG01016094001 Vitis vinifera HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1217.6 831 78.1
p5.00_sc00079_p0034 Elaeis guineensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1210.3 842 76.1
Ma09_g26670 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1194.5 841 75.5
CALSI_Maker00040564 Calamus simplicifolius HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1189.1 842 75.1
Aco018477 Ananas comosus HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1184.5 846 74.0
Oropetium_20150105_13133 Oropetium thomaeum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1184.5 838 74.5
ASH_gene16649 Apostasia shenzhenica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1183.7 843 73.8
ATR1098G037 Amborella trichopoda HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1183.3 838 74.9
evm.TU.AsparagusV1_07.3477.V1.1 Asparagus officinalis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1177.5 842 73.5
Ma06_g32990 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1174.1 838 74.8
Misin06G412700 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1171.0 850 73.6
Bradi2g58070 Brachypodium distachyon HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1169.1 840 72.9
Zosma30g00970 Zostera marina HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1167.9 839 75.0
OB01G49770 Oryza brachyantha HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1161.4 842 72.9
Misin06G362600 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1158.7 850 72.9
Seita.5G420100 Setaria italica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1147.5 858 71.9
Sobic.003G394200 Sorghum bicolor HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1144.8 850 72.2
Zm00008a013008 Zea mays PH207 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1142.9 862 71.6
Zm00001d042451 Zea mays B73 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1139.8 867 71.0
LP034954 Lolium perenne HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1138.3 843 70.8
TraesCS3B02G422700 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1136.3 851 70.4
HORVU3Hr1G088490 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1134.4 845 70.8
TraesCS3D02G383500 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1132.9 851 70.3
Spipo16G0007900 Spirodela polyrhiza HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1128.6 845 71.6
TraesCS3A02G390900 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1128.6 851 69.9
TRITD3Av1G230670 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1128.6 851 69.9
Sspon.03G0000770-1A Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1118.2 850 71.1
OsR498G0102540800.01 Oryza sativa ssp. indica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1114.0 827 71.9
HORVU3Hr1G088450 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1111.3 845 69.6
Sspon.03G0000770-4D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1099.7 850 69.9
TRITD3Bv1G217030 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1096.3 838 69.5
Sspon.03G0045090-1D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1081.2 887 67.0
Pgl_GLEAN_10010470 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 2.4e-304 1047.3 871 66.7
PH01000031G1260 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 1.3e-289 998.4 869 64.7
Mapoly0030s0152 Marchantia polymorpha HOM04x5M004483 ORTHO04x5M005884 1.4e-280 968.4 846 61.5
Zm00007a00032775 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 1.8e-275 951.4 722 69.8
gene23001 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 9.7e-266 919.1 839 58.8
gene24646 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 9.7e-266 919.1 839 58.8
Pp3c8_8190 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 1.7e-265 918.3 832 58.3
Pp3c24_4920 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 1.6e-263 911.8 833 58.0
Sspon.03G0000770-3C Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 7.3e-245 849.7 656 68.6
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 5.2e-227 790.4 850 55.1
PH01000229G0300 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 6.5e-169 597.4 656 54.6
Zjn_sc00034.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 4.7e-167 591.3 840 46.9
LOC_Os01g67880 Oryza sativa ssp. japonica HOM04x5M004483 ORTHO04x5M005884 5.3e-155 551.2 399 71.4
PEQU_14398 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 3.0e-150 535.4 406 69.0
MCO12G450 Micromonas commoda HOM04x5M004483 ORTHO04x5M005884 2.3e-137 492.7 779 39.4
AT1G50970 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 2.2e-124 449.5 801 41.4
PEQU_01746 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 4.6e-114 415.2 281 78.6
Cre06.g259600 Chlamydomonas reinhardtii HOM04x5M004483 ORTHO04x5M005884 1.7e-100 370.2 810 32.3
Zjn_sc00009.1.g03380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 3.3e-88 329.3 301 61.1
Misin11G134900 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 1.6e-79 300.4 182 89.0
Zm00007a00040839 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 1.8e-46 190.7 117 88.0
PAB00008915 Picea abies HOM04x5M004483 ORTHO04x5M005884 2.9e-44 183.3 120 74.2
PAB00059840 Picea abies HOM04x5M004483 ORTHO04x5M005884 6.3e-31 139.0 139 56.1
PEQU_14397 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M021890 4.1e-30 136.3 145 55.2
PAB00038035 Picea abies HOM04x5M004483 ORTHO04x5M021890 1.0e-20 105.1 161 41.6
Pgl_GLEAN_10023950 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 3.7e-15 86.7 48 91.7
Zm00001d045865 Zea mays B73 HOM04x5M004483 ORTHO04x5M021890 2.5e-11 73.9 116 42.2
evm.TU.AsparagusV1_01.70.V1.1 Asparagus officinalis HOM04x5M001647 ORTHO04x5M039403 1.7e-07 61.2 38 73.7
evm.TU.AsparagusV1_04.1246.V1.1 Asparagus officinalis HOM04x5M005851 ORTHO04x5M007066 1.7e-07 61.2 38 73.7

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings