Gene: Zm00001d039856 (Zea mays)

Overview top

Gene Identifier
Zm00001d039856
Transcript Identifier
Zm00001d039856_T002
Gene Type
Coding gene
Location
3 : 16787392-16799490 : negative

Family Information

Homologous gene family
HOM04D006251
(64 genes in 53 species)
specific family

Descriptions

Description
Geranylgeranyl transferase type-1 subunit beta

Identifiers

Type Value
pidZm00001d039856_P002
tidZm00001d039856_T002
V3_identifierGRMZM2G451327
V3_identifierGRMZM2G151087

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018344
IEA
PLAZA Integrative Orthologyprotein geranylgeranylation AT2G39550
GO:0050732
IEA
PLAZA Integrative Orthologynegative regulation of peptidyl-tyrosine phosphorylation AT5G10480
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation AT5G10480
GO:0048640
IEA
PLAZA Integrative Orthologynegative regulation of developmental growth AT5G10480
GO:0009737
IEA
PLAZA Integrative Orthologyresponse to abscisic acid AT2G39550
GO:0051302
IEA
PLAZA Integrative Orthologyregulation of cell division AT5G10480
GO:0009788
IEA
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT2G39550
GO:0009414
IEA
PLAZA Integrative Orthologyresponse to water deprivation AT2G39550
GO:0009733
IEA
PLAZA Integrative Orthologyresponse to auxin AT2G39550
GO:0042761
IEA
PLAZA Integrative Orthologyvery long-chain fatty acid biosynthetic process AT5G10480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0046982
IEA
PLAZA Integrative Orthologyprotein heterodimerization activity AT2G39550
GO:0004662
IEA
PLAZA Integrative OrthologyCAAX-protein geranylgeranyltransferase activity AT2G39550
GO:0080023
IEA
PLAZA Integrative Orthology3R-hydroxyacyl-CoA dehydratase activity AT5G10480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT5G10480
GO:0016021
IEA
PLAZA Integrative Orthologyintegral component of membrane AT5G10480
GO:0005953
IEA
PLAZA Integrative OrthologyCAAX-protein geranylgeranyltransferase complex AT2G39550
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT5G10480
GO:0009923
IEA
PLAZA Integrative Orthologyfatty acid elongase complex AT5G10480
GO:0005783
IEA
PLAZA Integrative Orthologyendoplasmic reticulum AT5G10480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001330PFTB repeat
IPR007482Protein-tyrosine phosphatase-like, PTPLA
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid

Mapman id Description
5.1.6.1.3.Lipid metabolism.fatty acid biosynthesis.endoplasmic reticulum-localized fatty acid elongase (FAE) system.fatty acid elongation complex.3-hydroxyacyl-CoA dehydratase (HCD)
18.3.2.1.2.Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase heterodimer.subunit beta