Dicots PLAZA 4.5 gene overview : ZJU.LOC107426968

Gene: ZJU.LOC107426968 (Ziziphus jujuba)

Overview

Gene Identifier: ZJU.LOC107426968
Transcript Identifier: ZJU.XM_016037292.1
Gene Type: Coding gene
Location: NC_029687.1 : 10678769-10681587 : negative

Family Information

Homologous gene family: HOM04D204829
(orphan gene)
specific family

Descriptions

Description: LOW QUALITY PROTEIN: PRKR-interacting protein 1

Identifiers

Type	Value
id	LOC107426968
id	gene18658
tid	XM_016037292.1
tid	rna23446
GeneID	107426968
pid	XP_015892778.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR009548	Protein of unknown function DUF1168

Mapman id	Description
35.2	not assigned.not annotated