Dicots PLAZA 4.5 gene overview : ZJU.LOC107426956

Gene: ZJU.LOC107426956 (Ziziphus jujuba)

Overview

Gene Identifier: ZJU.LOC107426956
Transcript Identifier: ZJU.XM_016037279.1
Gene Type: Coding gene
Location: NC_029687.1 : 10655775-10657777 : negative

Family Information

Homologous gene family: HOM04D000036
(2681 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D011806
(15 genes in 6 species)
specific family

Descriptions

Description: probable LRR receptor-like serine/threonine-protein kinase At4g37250

Identifiers

Type	Value
id	gene18656
id	LOC107426956
tid	XM_016037279.1
tid	rna23444
GeneID	107426956
pid	XP_015892765.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IEA	InterPro	protein phosphorylation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0005515	IEA	PLAZA Homology (enrichment)	protein binding	HOM04D000036

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR000719	Protein kinase domain
IPR011009	Protein kinase-like domain

Mapman id	Description
50.2.7	.Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group