Dicots PLAZA 4.5 gene overview : Tp6g26680

Gene: Tp6g26680 (Schrenkiella parvula)

Overview

Gene Identifier: Tp6g26680
Transcript Identifier: Tp6g26680.1
Gene Type: Coding gene
Location: ch6-6 : 5938032-5939670 : positive

Family Information

Homologous gene family: HOM04D000075
(2009 genes in 54 species)
specific family
Orthologous gene family: ORTHO04D000359
(498 genes in 48 species)
specific family

Descriptions

Description: transferase family protein

Identifiers

Type	Value

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010597	IEA	PLAZA Integrative Orthology	green leaf volatile biosynthetic process	AT3G03480

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016747	IEA	InterPro	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0010327	IEA	PLAZA Integrative Orthology	acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity	AT3G03480

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003480	Transferase

Mapman id	Description
50.2.3	.Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase