Gene: TPR.G23552 (Trifolium pratense)

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Gene Identifier
TPR.G23552
Transcript Identifier
TPR.T24362
Gene Type
Coding gene
Location
Tp57577_TGAC_v2_LG4 : 17892959-17899210 : positive

Family Information

Homologous gene family
HOM04D000436
(564 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D000406
(455 genes in 55 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idTp57577_TGAC_v2_gene23552.v2
tidTp57577_TGAC_v2_mRNA24362.v2
pidTp57577_TGAC_v2_mRNA24362
pacid35965567

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006535
IEA
InterProcysteine biosynthetic process from serine
GO:0019344
IEA
PLAZA Integrative Orthologycysteine biosynthetic process AT3G59760
GO:0048868
IEA
PLAZA Integrative Orthologypollen tube development AT3G59760
GO:0009735
IEA
PLAZA Integrative Orthologyresponse to cytokinin AT2G43750
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT2G43750
GO:0009567
IEA
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT3G59760
GO:0009860
IEA
PLAZA Integrative Orthologypollen tube growth AT3G59760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004124
IEA
InterProcysteine synthase activity
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT3G59760
GO:0005524
IEA
PLAZA Integrative OrthologyATP binding AT3G59760
GO:0008270
IEA
PLAZA Integrative Orthologyzinc ion binding AT3G59760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT2G43750
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion AT3G59760
GO:0005768
IEA
PLAZA Integrative Orthologyendosome AT2G43750
GO:0005802
IEA
PLAZA Integrative Orthologytrans-Golgi network AT2G43750
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT3G59760
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT2G43750
GO:0005794
IEA
PLAZA Integrative OrthologyGolgi apparatus AT2G43750
GO:0009941
IEA
PLAZA Integrative Orthologychloroplast envelope AT2G43750
GO:0009570
IEA
PLAZA Integrative Orthologychloroplast stroma AT3G59760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR001216Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site
IPR005859Cysteine synthase CysK
IPR005856Cysteine synthase

Mapman id Description
4.1.4.2.2.Amino acid metabolism.biosynthesis.serine family.cysteine.O-acetylserine sulfydrylase