Dicots PLAZA 4.5 gene overview : TPR.G13455

Gene: TPR.G13455 (Trifolium pratense)

Overview

Gene Identifier: TPR.G13455
Transcript Identifier: TPR.T13906
Gene Type: Coding gene
Location: Tp57577_TGAC_v2_LG7 : 5844081-5846533 : negative

Family Information

Homologous gene family: HOM04D002226
(145 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D003365
(114 genes in 55 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	Tp57577_TGAC_v2_gene13455.v2
tid	Tp57577_TGAC_v2_mRNA13906.v2
pid	Tp57577_TGAC_v2_mRNA13906
pacid	35956006

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008152	IEA	InterPro	metabolic process
GO:0045454	IEA	InterPro	cell redox homeostasis
GO:0019419	IEA	InterPro	sulfate reduction
GO:0055114	IEA	InterPro	oxidation-reduction process
GO:0000103	IEA	PLAZA Integrative Orthology	sulfate assimilation	AT4G04610
GO:0019379	IEA	PLAZA Integrative Orthology	sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	AT1G62180

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003824	IEA	InterPro	catalytic activity
GO:0016671	IEA	InterPro	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0009973	IEA	PLAZA Integrative Orthology	adenylyl-sulfate reductase activity	AT4G04610
GO:0004604	IEA	PLAZA Integrative Orthology	phosphoadenylyl-sulfate reductase (thioredoxin) activity	AT1G62180

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009536	IEA	PLAZA Integrative Orthology	plastid	AT4G04610
GO:0009534	IEA	PLAZA Integrative Orthology	chloroplast thylakoid	AT4G04610
GO:0009507	IEA	PLAZA Integrative Orthology	chloroplast	AT4G21990
GO:0009570	IEA	PLAZA Integrative Orthology	chloroplast stroma	AT4G04610

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002500	Phosphoadenosine phosphosulphate reductase
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR013766	Thioredoxin domain
IPR012336	Thioredoxin-like fold
IPR004508	Thioredoxin-independent 5'-adenylylsulphate reductase

Mapman id	Description
25.2.1.3	.Nutrient uptake.sulfur assimilation.sulfate assimilation.(P)APS reductase