Gene: TPR.G12098 (Trifolium pratense)

Overview top

Gene Identifier
TPR.G12098
Transcript Identifier
TPR.T12494
Gene Type
Coding gene
Location
Tp57577_TGAC_v2_LG1 : 22510949-22513966 : positive

Family Information

Homologous gene family
HOM04D002486
(133 genes in 52 species)
specific family
Orthologous gene family
ORTHO04D002781
(131 genes in 52 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idTp57577_TGAC_v2_gene12098.v2
tidTp57577_TGAC_v2_mRNA12494.v2
tidTp57577_TGAC_v2_mRNA12494
pacid35978478

Toolbox

Explore

Create

View

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT4G31580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003729
IEA
PLAZA Integrative OrthologymRNA binding AT4G31580
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT4G31580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
PLAZA Integrative Orthologynucleolus AT2G24590
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT2G24590
GO:0016607
IEA
PLAZA Integrative Orthologynuclear speck AT4G31580
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT1G23860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001878Zinc finger, CCHC-type
IPR000504RNA recognition motif domain

Mapman id Description
16.4.6.4.RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ21|22)