Gene: TPR.G12004 (Trifolium pratense)

Overview top

Gene Identifier
TPR.G12004
Transcript Identifier
TPR.T12398
Gene Type
Coding gene
Location
Tp57577_TGAC_v2_LG1 : 22429251-22443454 : positive

Family Information

Homologous gene family
HOM04D002987
(110 genes in 54 species)
specific family
Orthologous gene family
ORTHO04D004025
(97 genes in 54 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idTp57577_TGAC_v2_gene12004.v2
tidTp57577_TGAC_v2_mRNA12398.v2
pidTp57577_TGAC_v2_mRNA12398
pacid35979493

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing AT4G16130
GO:0019566
IEA
PLAZA Integrative Orthologyarabinose metabolic process AT4G16130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0005534
IEA
InterProgalactose binding
GO:0016757
IEA
InterProtransferase activity, transferring glycosyl groups
GO:0009702
IEA
PLAZA Integrative OrthologyL-arabinokinase activity AT4G16130
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity AT4G16130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT4G16130
GO:0009506
IEA
PLAZA Integrative Orthologyplasmodesma AT4G16130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR013750GHMP kinase, C-terminal domain
IPR029044Nucleotide-diphospho-sugar transferases
IPR006204GHMP kinase N-terminal domain
IPR019539Galactokinase galactose-binding domain
IPR015338Exostosin , C-terminal
IPR020568Ribosomal protein S5 domain 2-type fold

Mapman id Description
3.13.7.2.1.Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose biosynthesis.salvage biosynthesis.L-arabinose kinase