Dicots PLAZA 4.5 gene overview : TPR.G10258

Gene: TPR.G10258 (Trifolium pratense)

Overview

Gene Identifier: TPR.G10258
Transcript Identifier: TPR.T10600
Gene Type: Coding gene
Location: Tp57577_TGAC_v2_LG1 : 3318835-3322709 : positive

Family Information

Homologous gene family: HOM04D000774
(354 genes in 53 species)
specific family
Orthologous gene family: ORTHO04D000610
(351 genes in 55 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	Tp57577_TGAC_v2_gene10258.v2
tid	Tp57577_TGAC_v2_mRNA10600.v2
tid	Tp57577_TGAC_v2_mRNA10600
pacid	35980113

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000160	IEA	InterPro	phosphorelay signal transduction system
GO:0010105	IEA	InterPro	negative regulation of ethylene-activated signaling pathway
GO:0050896	IEA	InterPro	response to stimulus
GO:0007165	IEA	InterPro	signal transduction

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0000155	IEA	InterPro	phosphorelay sensor kinase activity
GO:0004673	IEA	InterPro	protein histidine kinase activity
GO:0038199	IEA	InterPro	ethylene receptor activity
GO:0051740	IEA	InterPro	ethylene binding
GO:0004872	IEA	PLAZA Integrative Orthology	receptor activity	AT3G04580
GO:0004674	IEA	PLAZA Integrative Orthology	protein serine/threonine kinase activity	AT3G04580

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005789	IEA	InterPro	endoplasmic reticulum membrane
GO:0005783	IEA	PLAZA Integrative Orthology	endoplasmic reticulum	AT3G04580

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR029016	GAF domain-like
IPR003594	Histidine kinase-like ATPase, C-terminal domain
IPR003018	GAF domain
IPR001789	Signal transduction response regulator, receiver domain
IPR014525	Ethylene receptor
IPR005467	Histidine kinase domain
IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR011006	CheY-like superfamily

Mapman id	Description
11.5.2.1	.Phytohormone action.ethylene.perception and signal transduction.receptor protein (ETR/ERS)