Gene: TCA.TCM_026371 (Theobroma cacao)
Overview 
- Gene Identifier
- TCA.TCM_026371
- Transcript Identifier
- TCA.XM_007030532.1
- Gene Type
- Coding gene
- Location
- NC_023621.1 : 37931407-37933471 : positive
Family Information
- Homologous gene family
- Orthologous gene family
- Duplication type
- Tandem duplicate and Block duplicate
Descriptions
- Description
-
NAD(P)-linked oxidoreductase superfamily protein
Identifiers
| Type | Value |
|---|---|
| id | gene16856 |
| id | Thecc1EG026371 |
| id | TCM_026371 |
| tid | XM_007030532.1 |
| tid | rna25451 |
| pid | XP_007030594.1 |
| GeneID | 18600214 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
Create
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...all colinear gene pairs.
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench