Dicots PLAZA 4.5 gene overview : TCA.TCM_025648

Gene: TCA.TCM_025648 (Theobroma cacao)

Overview

Gene Identifier: TCA.TCM_025648
Transcript Identifier: TCA.XM_007029715.1
Gene Type: Coding gene
Location: NC_023621.1 : 33905722-33907499 : positive

Family Information

Homologous gene family: HOM04D000075
(2009 genes in 54 species)
specific family
Orthologous gene family: ORTHO04D000359
(498 genes in 48 species)
specific family

Duplication type: Tandem duplicate

Descriptions

Description: Benzoyl coenzyme A: Benzyl alcohol benzoyl transferase, putative

Identifiers

Type	Value
id	Thecc1EG025648
id	TCM_025648
id	gene16296
tid	rna24634
tid	XM_007029715.1
pid	XP_007029777.1
GeneID	18599654

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016747	IEA	InterPro	transferase activity, transferring acyl groups other than amino-acyl groups

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003480	Transferase

Mapman id	Description
50.2.3	.Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase