Gene: Solyc04g050930.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc04g050930.2
Transcript Identifier
Solyc04g050930.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 48984442-48986969 : negative

Family Information

Homologous gene family
HOM04D006049
(66 genes in 54 species)
specific family

Descriptions

Description
Violaxanthin de-epoxidase

Identifiers

Type Value
idSolyc04g050930.2.ITAG2.4
pacid36142649
tidSolyc04g050930.2.1.ITAG2.4
tidSolyc04g050930.2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009416
IEP
Gene Ontologyresponse to light stimulus1
GO:0006631
IEA
PLAZA Integrative Orthologyfatty acid metabolic process AT1G08550
GO:0016122
IEA
PLAZA Integrative Orthologyxanthophyll metabolic process AT1G08550
GO:0010028
IEA
PLAZA Integrative Orthologyxanthophyll cycle AT1G08550
GO:0009408
IEA
PLAZA Integrative Orthologyresponse to heat AT1G08550
GO:0015994
IEA
PLAZA Integrative Orthologychlorophyll metabolic process AT1G08550
GO:0055114
IEA
InterProoxidation-reduction process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT1G08550
GO:0019904
IEA
PLAZA Integrative Orthologyprotein domain specific binding AT1G08550
GO:0046422
IEA
InterProviolaxanthin de-epoxidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009543
IEA
PLAZA Integrative Orthologychloroplast thylakoid lumen AT1G08550
GO:0009534
IEA
PLAZA Integrative Orthologychloroplast thylakoid AT1G08550
GO:0030095
IEA
PLAZA Integrative Orthologychloroplast photosystem II AT1G08550
GO:0031977
IEA
PLAZA Integrative Orthologythylakoid lumen AT1G08550
GO:0009507
IEA
InterProchloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012674Calycin
IPR010788VDE lipocalin domain
IPR022272Lipocalin family conserved site

Mapman id Description
1.1.1.5.1.3.1Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).xanthophyll cycle.violaxanthin de-epoxidase
9.1.6.2.2.Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.violaxanthin de-epoxidase (VDE)