Dicots PLAZA 4.5 gene overview : SMO270G0026

Gene: SMO270G0026 (Selaginella moellendorffii)

Overview

Gene Identifier: SMO270G0026
Transcript Identifier: SMO270G0026.1
Gene Type: Coding gene
Location: scaffold_65 : 832546-833107 : positive

Family Information

Homologous gene family: HOM04D000133
(1389 genes in 52 species)
specific family
Orthologous gene family: ORTHO04D000113
(921 genes in 52 species)
specific family

Duplication type: Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
alias	e_gw1.65.176.1
id	121574.v1
name	121574
pacid	15418436
tid	121574.v1.91

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR004314	Neprosin

Mapman id	Description
35.2	not assigned.not annotated