Dicots PLAZA 4.5 gene overview : RCO.g.30169.000276

Gene: RCO.g.30169.000276 (Ricinus communis)

Overview

Gene Identifier: RCO.g.30169.000276
Transcript Identifier: RCO.t.30169.006499
Gene Type: Coding gene
Location: 30169 : 1576162-1586338 : positive

Family Information

Homologous gene family: HOM04D001391
(213 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D004381
(92 genes in 54 species)
specific family

Descriptions

Description: glutamate synthase, putative

Identifiers

Type	Value
id	30169.t000276.TIGRR0.1
pacid	16821299
tid	30169.m006499
tid	30169.m006499.TIGRR0.1

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006537	IEA	InterPro	glutamate biosynthetic process
GO:0055114	IEA	InterPro	oxidation-reduction process
GO:0008152	IEA	InterPro	metabolic process
GO:0006807	IEA	InterPro	nitrogen compound metabolic process
GO:0060359	IEA	PLAZA Tree-based Orthology	response to ammonium ion	LOC_Os01g48960
GO:0042128	IEA	PLAZA Integrative Orthology	nitrate assimilation	AT5G53460
GO:0009735	IEA	PLAZA Integrative Orthology	response to cytokinin	AT5G53460
GO:0048589	IEA	PLAZA Integrative Orthology	developmental growth	AT5G53460
GO:0019676	IEA	PLAZA Integrative Orthology	ammonia assimilation cycle	AT5G53460
GO:0046686	IEA	PLAZA Integrative Orthology	response to cadmium ion	AT5G53460

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015930	IEA	InterPro	glutamate synthase activity
GO:0016638	IEA	InterPro	oxidoreductase activity, acting on the CH-NH2 group of donors
GO:0003824	IEA	InterPro	catalytic activity
GO:0016491	IEA	InterPro	oxidoreductase activity
GO:0005506	IEA	InterPro	iron ion binding
GO:0010181	IEA	InterPro	FMN binding
GO:0016040	IEA	InterPro	glutamate synthase (NADH) activity
GO:0045181	IEA	InterPro	glutamate synthase activity, NAD(P)H as acceptor
GO:0050660	IEA	InterPro	flavin adenine dinucleotide binding
GO:0051536	IEA	InterPro	iron-sulfur cluster binding
GO:0016639	IEA	InterPro	oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009536	IEA	PLAZA Integrative Orthology	plastid	AT5G53460
GO:0009507	IEA	PLAZA Integrative Orthology	chloroplast	AT5G53460
GO:0009570	IEA	PLAZA Integrative Orthology	chloroplast stroma	AT5G53460

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002932	Glutamate synthase domain
IPR013785	Aldolase-type TIM barrel
IPR023753	FAD/NAD(P)-binding domain
IPR029055	Nucleophile aminohydrolases, N-terminal
IPR002489	Glutamate synthase, alpha subunit, C-terminal
IPR028261	Dihydroprymidine dehydrogenase domain II
IPR006982	Glutamate synthase, central-N
IPR017932	Glutamine amidotransferase type 2 domain
IPR012220	Glutamate synthase, eukaryotic
IPR009051	Alpha-helical ferredoxin
IPR006005	Glutamate synthase, NADH/NADPH, small subunit 1

Mapman id	Description
25.1.5.2.2	.Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.NADH-dependent glutamate synthase